Protein–RNA interactions for Protein: H0YCH9

MS4A18, Membrane-spanning 4-domains subfamily A member 18, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A18H0YCH9 DUX4L24-201ENST00000617576 1269 ntBASIC22.55■■□□□ 1.2
MS4A18H0YCH9 DUX4L22-201ENST00000618238 1269 ntBASIC22.55■■□□□ 1.2
MS4A18H0YCH9 DUX4L20-201ENST00000619712 1269 ntBASIC22.55■■□□□ 1.2
MS4A18H0YCH9 DUX4L21-201ENST00000622058 1269 ntBASIC22.55■■□□□ 1.2
MS4A18H0YCH9 DUX4L10-201ENST00000622460 1267 ntBASIC22.55■■□□□ 1.2
MS4A18H0YCH9 DUX4L25-201ENST00000624915 1269 ntBASIC22.55■■□□□ 1.2
MS4A18H0YCH9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
MS4A18H0YCH9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
MS4A18H0YCH9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
MS4A18H0YCH9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
MS4A18H0YCH9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MS4A18H0YCH9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
MS4A18H0YCH9 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
MS4A18H0YCH9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
MS4A18H0YCH9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
MS4A18H0YCH9 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
MS4A18H0YCH9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.52■■□□□ 1.19
MS4A18H0YCH9 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
MS4A18H0YCH9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
MS4A18H0YCH9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
MS4A18H0YCH9 AL121749.1-202ENST00000609313 2153 ntBASIC22.5■■□□□ 1.19
MS4A18H0YCH9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
MS4A18H0YCH9 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
MS4A18H0YCH9 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.49■■□□□ 1.19
MS4A18H0YCH9 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
MS4A18H0YCH9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
MS4A18H0YCH9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
MS4A18H0YCH9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
MS4A18H0YCH9 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MS4A18H0YCH9 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
MS4A18H0YCH9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.47■■□□□ 1.19
MS4A18H0YCH9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
MS4A18H0YCH9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
MS4A18H0YCH9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
MS4A18H0YCH9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
MS4A18H0YCH9 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MS4A18H0YCH9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.46■■□□□ 1.19
MS4A18H0YCH9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.46■■□□□ 1.19
MS4A18H0YCH9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
MS4A18H0YCH9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
MS4A18H0YCH9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A18H0YCH9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.45■■□□□ 1.18
MS4A18H0YCH9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A18H0YCH9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
MS4A18H0YCH9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
MS4A18H0YCH9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
MS4A18H0YCH9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.44■■□□□ 1.18
MS4A18H0YCH9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.43■■□□□ 1.18
MS4A18H0YCH9 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.42■■□□□ 1.18
MS4A18H0YCH9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MS4A18H0YCH9 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
MS4A18H0YCH9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MS4A18H0YCH9 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MS4A18H0YCH9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MS4A18H0YCH9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
MS4A18H0YCH9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.4■■□□□ 1.18
MS4A18H0YCH9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MS4A18H0YCH9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
MS4A18H0YCH9 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MS4A18H0YCH9 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
MS4A18H0YCH9 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.39■■□□□ 1.17
MS4A18H0YCH9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.39■■□□□ 1.17
MS4A18H0YCH9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MS4A18H0YCH9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
MS4A18H0YCH9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.38■■□□□ 1.17
MS4A18H0YCH9 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MS4A18H0YCH9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
MS4A18H0YCH9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MS4A18H0YCH9 CR559946.2-201ENST00000623684 991 ntBASIC22.37■■□□□ 1.17
MS4A18H0YCH9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
MS4A18H0YCH9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
MS4A18H0YCH9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms