Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
LINC00473A8K010 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
LINC00473A8K010 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.49■□□□□ 0.87
LINC00473A8K010 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00473A8K010 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00473A8K010 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00473A8K010 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00473A8K010 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
LINC00473A8K010 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00473A8K010 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LINC00473A8K010 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.47■□□□□ 0.87
LINC00473A8K010 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.47■□□□□ 0.87
LINC00473A8K010 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00473A8K010 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00473A8K010 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00473A8K010 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.46■□□□□ 0.87
LINC00473A8K010 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC00473A8K010 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC00473A8K010 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC00473A8K010 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
LINC00473A8K010 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
LINC00473A8K010 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC00473A8K010 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.45■□□□□ 0.86
LINC00473A8K010 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00473A8K010 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC00473A8K010 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LINC00473A8K010 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.44■□□□□ 0.86
LINC00473A8K010 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00473A8K010 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00473A8K010 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00473A8K010 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.44■□□□□ 0.86
LINC00473A8K010 AC044849.2-201ENST00000606596 710 ntBASIC20.44■□□□□ 0.86
LINC00473A8K010 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00473A8K010 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00473A8K010 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00473A8K010 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00473A8K010 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00473A8K010 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00473A8K010 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00473A8K010 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LINC00473A8K010 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.42■□□□□ 0.86
LINC00473A8K010 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00473A8K010 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.42■□□□□ 0.86
LINC00473A8K010 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC20.42■□□□□ 0.86
LINC00473A8K010 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
LINC00473A8K010 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00473A8K010 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00473A8K010 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00473A8K010 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC00473A8K010 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00473A8K010 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.41■□□□□ 0.86
LINC00473A8K010 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00473A8K010 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LINC00473A8K010 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
LINC00473A8K010 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LINC00473A8K010 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LINC00473A8K010 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.39■□□□□ 0.85
LINC00473A8K010 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00473A8K010 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00473A8K010 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.38■□□□□ 0.85
LINC00473A8K010 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00473A8K010 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
LINC00473A8K010 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00473A8K010 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00473A8K010 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
LINC00473A8K010 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00473A8K010 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00473A8K010 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.37■□□□□ 0.85
LINC00473A8K010 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
LINC00473A8K010 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
LINC00473A8K010 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
LINC00473A8K010 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00473A8K010 AC110285.7-201ENST00000624417 1536 ntBASIC20.36■□□□□ 0.85
LINC00473A8K010 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00473A8K010 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LINC00473A8K010 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
LINC00473A8K010 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00473A8K010 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00473A8K010 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
LINC00473A8K010 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC20.35■□□□□ 0.85
LINC00473A8K010 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LINC00473A8K010 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LINC00473A8K010 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00473A8K010 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00473A8K010 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00473A8K010 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.34■□□□□ 0.85
LINC00473A8K010 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LINC00473A8K010 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00473A8K010 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00473A8K010 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.34■□□□□ 0.85
LINC00473A8K010 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00473A8K010 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.33■□□□□ 0.85
LINC00473A8K010 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.33■□□□□ 0.85
LINC00473A8K010 AC021231.2-201ENST00000594613 730 ntBASIC20.33■□□□□ 0.85
LINC00473A8K010 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LINC00473A8K010 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LINC00473A8K010 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC00473A8K010 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LINC00473A8K010 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LINC00473A8K010 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms