Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CGB1A6NKQ9 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGB1A6NKQ9 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.05■□□□□ 0.8
CGB1A6NKQ9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.05■□□□□ 0.8
CGB1A6NKQ9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CGB1A6NKQ9 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CGB1A6NKQ9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CGB1A6NKQ9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CGB1A6NKQ9 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CGB1A6NKQ9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CGB1A6NKQ9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CGB1A6NKQ9 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGB1A6NKQ9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CGB1A6NKQ9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.02■□□□□ 0.8
CGB1A6NKQ9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CGB1A6NKQ9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CGB1A6NKQ9 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CGB1A6NKQ9 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
CGB1A6NKQ9 AC021231.2-201ENST00000594613 730 ntBASIC20.01■□□□□ 0.79
CGB1A6NKQ9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.01■□□□□ 0.79
CGB1A6NKQ9 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.01■□□□□ 0.79
CGB1A6NKQ9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CGB1A6NKQ9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CGB1A6NKQ9 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CGB1A6NKQ9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20■□□□□ 0.79
CGB1A6NKQ9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CGB1A6NKQ9 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CGB1A6NKQ9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CGB1A6NKQ9 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC19.99■□□□□ 0.79
CGB1A6NKQ9 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CGB1A6NKQ9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CGB1A6NKQ9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.98■□□□□ 0.79
CGB1A6NKQ9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CGB1A6NKQ9 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CGB1A6NKQ9 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.98■□□□□ 0.79
CGB1A6NKQ9 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CGB1A6NKQ9 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CGB1A6NKQ9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CGB1A6NKQ9 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CGB1A6NKQ9 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CGB1A6NKQ9 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CGB1A6NKQ9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CGB1A6NKQ9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC19.96■□□□□ 0.79
CGB1A6NKQ9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CGB1A6NKQ9 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CGB1A6NKQ9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.95■□□□□ 0.78
CGB1A6NKQ9 AC110285.7-201ENST00000624417 1536 ntBASIC19.95■□□□□ 0.78
CGB1A6NKQ9 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.95■□□□□ 0.78
CGB1A6NKQ9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGB1A6NKQ9 DUX4L29-201ENST00000425409 679 ntBASIC19.94■□□□□ 0.78
CGB1A6NKQ9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CGB1A6NKQ9 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CGB1A6NKQ9 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CGB1A6NKQ9 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC19.93■□□□□ 0.78
CGB1A6NKQ9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CGB1A6NKQ9 RPS2P35-201ENST00000443417 897 ntBASIC19.93■□□□□ 0.78
CGB1A6NKQ9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CGB1A6NKQ9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.92■□□□□ 0.78
CGB1A6NKQ9 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CGB1A6NKQ9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CGB1A6NKQ9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.91■□□□□ 0.78
CGB1A6NKQ9 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGB1A6NKQ9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CGB1A6NKQ9 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.9■□□□□ 0.78
CGB1A6NKQ9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGB1A6NKQ9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CGB1A6NKQ9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CGB1A6NKQ9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CGB1A6NKQ9 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGB1A6NKQ9 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CGB1A6NKQ9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CGB1A6NKQ9 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CGB1A6NKQ9 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CGB1A6NKQ9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.89■□□□□ 0.77
CGB1A6NKQ9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.89■□□□□ 0.77
CGB1A6NKQ9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGB1A6NKQ9 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGB1A6NKQ9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.88■□□□□ 0.77
CGB1A6NKQ9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CGB1A6NKQ9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.88■□□□□ 0.77
CGB1A6NKQ9 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CGB1A6NKQ9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.87■□□□□ 0.77
CGB1A6NKQ9 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CGB1A6NKQ9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CGB1A6NKQ9 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms