Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ABCB10P3-201ENST00000561950 2166 ntBASIC25.21■■□□□ 1.63
TBC1D3FA6NER0 ABCB10P1-201ENST00000614297 2181 ntBASIC25.21■■□□□ 1.63
TBC1D3FA6NER0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D3FA6NER0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
TBC1D3FA6NER0 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.63
TBC1D3FA6NER0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.2■■□□□ 1.63
TBC1D3FA6NER0 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
TBC1D3FA6NER0 NTF6A-201ENST00000591175 560 ntBASIC25.2■■□□□ 1.62
TBC1D3FA6NER0 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.2■■□□□ 1.62
TBC1D3FA6NER0 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.2■■□□□ 1.62
TBC1D3FA6NER0 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
TBC1D3FA6NER0 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TBC1D3FA6NER0 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
TBC1D3FA6NER0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.19■■□□□ 1.62
TBC1D3FA6NER0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
TBC1D3FA6NER0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
TBC1D3FA6NER0 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.19■■□□□ 1.62
TBC1D3FA6NER0 AC092296.2-201ENST00000589470 999 ntBASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
TBC1D3FA6NER0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TBC1D3FA6NER0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
TBC1D3FA6NER0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.16■■□□□ 1.62
TBC1D3FA6NER0 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.16■■□□□ 1.62
TBC1D3FA6NER0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.16■■□□□ 1.62
TBC1D3FA6NER0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
TBC1D3FA6NER0 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.15■■□□□ 1.62
TBC1D3FA6NER0 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TBC1D3FA6NER0 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
TBC1D3FA6NER0 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
TBC1D3FA6NER0 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TBC1D3FA6NER0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TBC1D3FA6NER0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
TBC1D3FA6NER0 ECEL1P2-201ENST00000461596 1295 ntBASIC25.14■■□□□ 1.62
TBC1D3FA6NER0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.13■■□□□ 1.61
TBC1D3FA6NER0 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.13■■□□□ 1.61
TBC1D3FA6NER0 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TBC1D3FA6NER0 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TBC1D3FA6NER0 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.13■■□□□ 1.61
TBC1D3FA6NER0 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.12■■□□□ 1.61
TBC1D3FA6NER0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.12■■□□□ 1.61
TBC1D3FA6NER0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D3FA6NER0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.11■■□□□ 1.61
TBC1D3FA6NER0 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
TBC1D3FA6NER0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TBC1D3FA6NER0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
TBC1D3FA6NER0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.1■■□□□ 1.61
TBC1D3FA6NER0 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.1■■□□□ 1.61
TBC1D3FA6NER0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.1■■□□□ 1.61
TBC1D3FA6NER0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TBC1D3FA6NER0 U85056.1-201ENST00000616429 682 ntBASIC25.09■■□□□ 1.61
TBC1D3FA6NER0 AC012354.3-201ENST00000623734 483 ntBASIC25.09■■□□□ 1.61
TBC1D3FA6NER0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TBC1D3FA6NER0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TBC1D3FA6NER0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D3FA6NER0 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.08■■□□□ 1.61
TBC1D3FA6NER0 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.08■■□□□ 1.61
TBC1D3FA6NER0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
TBC1D3FA6NER0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
TBC1D3FA6NER0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.08■■□□□ 1.6
TBC1D3FA6NER0 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TBC1D3FA6NER0 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
TBC1D3FA6NER0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
TBC1D3FA6NER0 AL359258.2-201ENST00000564063 1566 ntBASIC25.06■■□□□ 1.6
TBC1D3FA6NER0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.06■■□□□ 1.6
TBC1D3FA6NER0 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TBC1D3FA6NER0 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
TBC1D3FA6NER0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D3FA6NER0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D3FA6NER0 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D3FA6NER0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
TBC1D3FA6NER0 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.05■■□□□ 1.6
TBC1D3FA6NER0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
TBC1D3FA6NER0 AP002414.2-202ENST00000590929 1450 ntBASIC25.04■■□□□ 1.6
TBC1D3FA6NER0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
TBC1D3FA6NER0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.04■■□□□ 1.6
TBC1D3FA6NER0 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
TBC1D3FA6NER0 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.03■■□□□ 1.6
TBC1D3FA6NER0 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
TBC1D3FA6NER0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.03■■□□□ 1.6
TBC1D3FA6NER0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
TBC1D3FA6NER0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.03■■□□□ 1.6
TBC1D3FA6NER0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
TBC1D3FA6NER0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
TBC1D3FA6NER0 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TBC1D3FA6NER0 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
TBC1D3FA6NER0 AL157400.5-201ENST00000507624 621 ntBASIC25.02■■□□□ 1.6
TBC1D3FA6NER0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms