Protein–RNA interactions for Protein: A0A0C4DH67

IGKV1-8, Immunoglobulin kappa variable 1-8, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-8A0A0C4DH67 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
IGKV1-8A0A0C4DH67 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
IGKV1-8A0A0C4DH67 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
IGKV1-8A0A0C4DH67 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
IGKV1-8A0A0C4DH67 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
IGKV1-8A0A0C4DH67 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC24.26■■□□□ 1.47
IGKV1-8A0A0C4DH67 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
IGKV1-8A0A0C4DH67 AC008813.1-201ENST00000536597 885 ntBASIC24.25■■□□□ 1.47
IGKV1-8A0A0C4DH67 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC24.25■■□□□ 1.47
IGKV1-8A0A0C4DH67 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
IGKV1-8A0A0C4DH67 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.24■■□□□ 1.47
IGKV1-8A0A0C4DH67 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
IGKV1-8A0A0C4DH67 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
IGKV1-8A0A0C4DH67 AC018358.1-201ENST00000631079 1402 ntBASIC24.23■■□□□ 1.47
IGKV1-8A0A0C4DH67 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
IGKV1-8A0A0C4DH67 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
IGKV1-8A0A0C4DH67 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
IGKV1-8A0A0C4DH67 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
IGKV1-8A0A0C4DH67 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
IGKV1-8A0A0C4DH67 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
IGKV1-8A0A0C4DH67 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
IGKV1-8A0A0C4DH67 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.2■■□□□ 1.47
IGKV1-8A0A0C4DH67 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
IGKV1-8A0A0C4DH67 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
IGKV1-8A0A0C4DH67 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
IGKV1-8A0A0C4DH67 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
IGKV1-8A0A0C4DH67 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
IGKV1-8A0A0C4DH67 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC24.19■■□□□ 1.46
IGKV1-8A0A0C4DH67 MIR4449-201ENST00000578365 66 ntBASIC24.19■■□□□ 1.46
IGKV1-8A0A0C4DH67 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
IGKV1-8A0A0C4DH67 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
IGKV1-8A0A0C4DH67 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.18■■□□□ 1.46
IGKV1-8A0A0C4DH67 AC148477.6-201ENST00000623746 465 ntBASIC24.18■■□□□ 1.46
IGKV1-8A0A0C4DH67 LINC01003-201ENST00000564834 1764 ntBASIC24.18■■□□□ 1.46
IGKV1-8A0A0C4DH67 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
IGKV1-8A0A0C4DH67 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
IGKV1-8A0A0C4DH67 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
IGKV1-8A0A0C4DH67 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
IGKV1-8A0A0C4DH67 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.16■■□□□ 1.46
IGKV1-8A0A0C4DH67 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
IGKV1-8A0A0C4DH67 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
IGKV1-8A0A0C4DH67 MIR219A2-201ENST00000608502 1504 ntBASIC24.15■■□□□ 1.46
IGKV1-8A0A0C4DH67 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
IGKV1-8A0A0C4DH67 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.15■■□□□ 1.46
IGKV1-8A0A0C4DH67 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.15■■□□□ 1.46
IGKV1-8A0A0C4DH67 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
IGKV1-8A0A0C4DH67 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
IGKV1-8A0A0C4DH67 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
IGKV1-8A0A0C4DH67 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
IGKV1-8A0A0C4DH67 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
IGKV1-8A0A0C4DH67 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
IGKV1-8A0A0C4DH67 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
IGKV1-8A0A0C4DH67 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
IGKV1-8A0A0C4DH67 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
IGKV1-8A0A0C4DH67 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
IGKV1-8A0A0C4DH67 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
IGKV1-8A0A0C4DH67 BX255925.1-201ENST00000566954 1854 ntBASIC24.12■■□□□ 1.45
IGKV1-8A0A0C4DH67 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
IGKV1-8A0A0C4DH67 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
IGKV1-8A0A0C4DH67 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC24.11■■□□□ 1.45
IGKV1-8A0A0C4DH67 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
IGKV1-8A0A0C4DH67 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
IGKV1-8A0A0C4DH67 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.09■■□□□ 1.45
IGKV1-8A0A0C4DH67 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
IGKV1-8A0A0C4DH67 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
IGKV1-8A0A0C4DH67 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
IGKV1-8A0A0C4DH67 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
IGKV1-8A0A0C4DH67 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
IGKV1-8A0A0C4DH67 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.06■■□□□ 1.44
IGKV1-8A0A0C4DH67 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
IGKV1-8A0A0C4DH67 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.06■■□□□ 1.44
IGKV1-8A0A0C4DH67 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC24.06■■□□□ 1.44
IGKV1-8A0A0C4DH67 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms