Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV24A0A0B4J272 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV24A0A0B4J272 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV24A0A0B4J272 DUX4L29-201ENST00000425409 679 ntBASIC21.11■□□□□ 0.97
TRAV24A0A0B4J272 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
TRAV24A0A0B4J272 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV24A0A0B4J272 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAV24A0A0B4J272 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.11■□□□□ 0.97
TRAV24A0A0B4J272 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV24A0A0B4J272 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
TRAV24A0A0B4J272 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.1■□□□□ 0.97
TRAV24A0A0B4J272 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
TRAV24A0A0B4J272 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV24A0A0B4J272 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
TRAV24A0A0B4J272 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
TRAV24A0A0B4J272 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV24A0A0B4J272 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV24A0A0B4J272 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV24A0A0B4J272 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRAV24A0A0B4J272 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV24A0A0B4J272 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV24A0A0B4J272 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV24A0A0B4J272 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV24A0A0B4J272 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.08■□□□□ 0.96
TRAV24A0A0B4J272 AC110285.7-201ENST00000624417 1536 ntBASIC21.08■□□□□ 0.96
TRAV24A0A0B4J272 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV24A0A0B4J272 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRAV24A0A0B4J272 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.07■□□□□ 0.96
TRAV24A0A0B4J272 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV24A0A0B4J272 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV24A0A0B4J272 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV24A0A0B4J272 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV24A0A0B4J272 RPS2P35-201ENST00000443417 897 ntBASIC21.06■□□□□ 0.96
TRAV24A0A0B4J272 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV24A0A0B4J272 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV24A0A0B4J272 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV24A0A0B4J272 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAV24A0A0B4J272 PEX7-203ENST00000541292 945 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAV24A0A0B4J272 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV24A0A0B4J272 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV24A0A0B4J272 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV24A0A0B4J272 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV24A0A0B4J272 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TRAV24A0A0B4J272 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAV24A0A0B4J272 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.03■□□□□ 0.96
TRAV24A0A0B4J272 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.03■□□□□ 0.96
TRAV24A0A0B4J272 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV24A0A0B4J272 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV24A0A0B4J272 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV24A0A0B4J272 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.02■□□□□ 0.95
TRAV24A0A0B4J272 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRAV24A0A0B4J272 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRAV24A0A0B4J272 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV24A0A0B4J272 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV24A0A0B4J272 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TRAV24A0A0B4J272 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.99■□□□□ 0.95
TRAV24A0A0B4J272 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV24A0A0B4J272 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAV24A0A0B4J272 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRAV24A0A0B4J272 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.99■□□□□ 0.95
TRAV24A0A0B4J272 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRAV24A0A0B4J272 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
TRAV24A0A0B4J272 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV24A0A0B4J272 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV24A0A0B4J272 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV24A0A0B4J272 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
TRAV24A0A0B4J272 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC20.98■□□□□ 0.95
TRAV24A0A0B4J272 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRAV24A0A0B4J272 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
TRAV24A0A0B4J272 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
TRAV24A0A0B4J272 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV24A0A0B4J272 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV24A0A0B4J272 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.96■□□□□ 0.95
TRAV24A0A0B4J272 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV24A0A0B4J272 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRAV24A0A0B4J272 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.95■□□□□ 0.94
TRAV24A0A0B4J272 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
TRAV24A0A0B4J272 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV24A0A0B4J272 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
TRAV24A0A0B4J272 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.95■□□□□ 0.94
TRAV24A0A0B4J272 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.94■□□□□ 0.94
TRAV24A0A0B4J272 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV24A0A0B4J272 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRAV24A0A0B4J272 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAV24A0A0B4J272 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.94■□□□□ 0.94
TRAV24A0A0B4J272 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRAV24A0A0B4J272 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV24A0A0B4J272 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.93■□□□□ 0.94
TRAV24A0A0B4J272 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
TRAV24A0A0B4J272 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRAV24A0A0B4J272 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.93■□□□□ 0.94
TRAV24A0A0B4J272 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRAV24A0A0B4J272 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms