Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC005559.1-201ENST00000589661 871 ntBASIC21.05■□□□□ 0.96
TRBV6-7A0A0A0MS04 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV6-7A0A0A0MS04 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV6-7A0A0A0MS04 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV6-7A0A0A0MS04 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV6-7A0A0A0MS04 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.04■□□□□ 0.96
TRBV6-7A0A0A0MS04 AC091060.1-201ENST00000623524 1766 ntBASIC21.04■□□□□ 0.96
TRBV6-7A0A0A0MS04 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV6-7A0A0A0MS04 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
TRBV6-7A0A0A0MS04 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
TRBV6-7A0A0A0MS04 AC135983.2-203ENST00000454486 1613 ntBASIC21.03■□□□□ 0.96
TRBV6-7A0A0A0MS04 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.03■□□□□ 0.96
TRBV6-7A0A0A0MS04 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV6-7A0A0A0MS04 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.02■□□□□ 0.96
TRBV6-7A0A0A0MS04 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRBV6-7A0A0A0MS04 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.02■□□□□ 0.96
TRBV6-7A0A0A0MS04 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.02■□□□□ 0.96
TRBV6-7A0A0A0MS04 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
TRBV6-7A0A0A0MS04 SUZ12P1-203ENST00000578195 985 ntBASIC21.01■□□□□ 0.95
TRBV6-7A0A0A0MS04 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRBV6-7A0A0A0MS04 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TRBV6-7A0A0A0MS04 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TRBV6-7A0A0A0MS04 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21■□□□□ 0.95
TRBV6-7A0A0A0MS04 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
TRBV6-7A0A0A0MS04 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV6-7A0A0A0MS04 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TRBV6-7A0A0A0MS04 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.99■□□□□ 0.95
TRBV6-7A0A0A0MS04 AC108673.1-201ENST00000510422 1159 ntBASIC20.99■□□□□ 0.95
TRBV6-7A0A0A0MS04 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.99■□□□□ 0.95
TRBV6-7A0A0A0MS04 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRBV6-7A0A0A0MS04 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRBV6-7A0A0A0MS04 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV6-7A0A0A0MS04 AC020928.2-201ENST00000588717 2197 ntBASIC20.98■□□□□ 0.95
TRBV6-7A0A0A0MS04 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV6-7A0A0A0MS04 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.98■□□□□ 0.95
TRBV6-7A0A0A0MS04 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV6-7A0A0A0MS04 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRBV6-7A0A0A0MS04 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV6-7A0A0A0MS04 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV6-7A0A0A0MS04 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV6-7A0A0A0MS04 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV6-7A0A0A0MS04 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.97■□□□□ 0.95
TRBV6-7A0A0A0MS04 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRBV6-7A0A0A0MS04 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV6-7A0A0A0MS04 AC018358.1-201ENST00000631079 1402 ntBASIC20.96■□□□□ 0.95
TRBV6-7A0A0A0MS04 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.96■□□□□ 0.95
TRBV6-7A0A0A0MS04 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRBV6-7A0A0A0MS04 WHAMMP2-203ENST00000563942 1603 ntBASIC20.96■□□□□ 0.95
TRBV6-7A0A0A0MS04 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV6-7A0A0A0MS04 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRBV6-7A0A0A0MS04 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.95■□□□□ 0.95
TRBV6-7A0A0A0MS04 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-7A0A0A0MS04 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-7A0A0A0MS04 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRBV6-7A0A0A0MS04 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-7A0A0A0MS04 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
TRBV6-7A0A0A0MS04 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-7A0A0A0MS04 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV6-7A0A0A0MS04 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRBV6-7A0A0A0MS04 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.94■□□□□ 0.94
TRBV6-7A0A0A0MS04 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRBV6-7A0A0A0MS04 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.93■□□□□ 0.94
TRBV6-7A0A0A0MS04 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV6-7A0A0A0MS04 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRBV6-7A0A0A0MS04 MIR6090-201ENST00000622481 60 ntBASIC20.93■□□□□ 0.94
TRBV6-7A0A0A0MS04 LINC00273-201ENST00000539813 1452 ntBASIC20.93■□□□□ 0.94
TRBV6-7A0A0A0MS04 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 AC093323.1-202ENST00000635031 2045 ntBASIC20.92■□□□□ 0.94
TRBV6-7A0A0A0MS04 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV6-7A0A0A0MS04 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV6-7A0A0A0MS04 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV6-7A0A0A0MS04 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TRBV6-7A0A0A0MS04 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
TRBV6-7A0A0A0MS04 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV6-7A0A0A0MS04 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TRBV6-7A0A0A0MS04 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.9■□□□□ 0.94
TRBV6-7A0A0A0MS04 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.89■□□□□ 0.94
TRBV6-7A0A0A0MS04 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRBV6-7A0A0A0MS04 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 AC145676.1-201ENST00000514988 2004 ntBASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 DUX4L28-201ENST00000623687 678 ntBASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRBV6-7A0A0A0MS04 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRBV6-7A0A0A0MS04 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
TRBV6-7A0A0A0MS04 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.88■□□□□ 0.93
TRBV6-7A0A0A0MS04 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRBV6-7A0A0A0MS04 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms