Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CCDC187A0A096LP49 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCDC187A0A096LP49 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCDC187A0A096LP49 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCDC187A0A096LP49 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCDC187A0A096LP49 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.11■■□□□ 1.45
CCDC187A0A096LP49 AC007029.1-201ENST00000604183 313 ntBASIC24.11■■□□□ 1.45
CCDC187A0A096LP49 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCDC187A0A096LP49 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.1■■□□□ 1.45
CCDC187A0A096LP49 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC187A0A096LP49 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.09■■□□□ 1.45
CCDC187A0A096LP49 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC187A0A096LP49 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC187A0A096LP49 RARRES2P1-201ENST00000474487 481 ntBASIC24.08■■□□□ 1.45
CCDC187A0A096LP49 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.08■■□□□ 1.45
CCDC187A0A096LP49 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC187A0A096LP49 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.08■■□□□ 1.44
CCDC187A0A096LP49 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC187A0A096LP49 AP004833.2-201ENST00000532228 1454 ntBASIC24.07■■□□□ 1.44
CCDC187A0A096LP49 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC187A0A096LP49 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC187A0A096LP49 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC187A0A096LP49 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC187A0A096LP49 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC187A0A096LP49 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CCDC187A0A096LP49 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CCDC187A0A096LP49 AC129492.7-201ENST00000622992 756 ntBASIC24.04■■□□□ 1.44
CCDC187A0A096LP49 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
CCDC187A0A096LP49 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC187A0A096LP49 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC187A0A096LP49 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC187A0A096LP49 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CCDC187A0A096LP49 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCDC187A0A096LP49 AC133552.2-201ENST00000619106 1032 ntBASIC24.03■■□□□ 1.44
CCDC187A0A096LP49 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
CCDC187A0A096LP49 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC187A0A096LP49 AL592293.1-201ENST00000502889 1188 ntBASIC24.02■■□□□ 1.44
CCDC187A0A096LP49 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC187A0A096LP49 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCDC187A0A096LP49 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
CCDC187A0A096LP49 AC009831.1-201ENST00000580420 1582 ntBASIC24.01■■□□□ 1.43
CCDC187A0A096LP49 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.01■■□□□ 1.43
CCDC187A0A096LP49 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC187A0A096LP49 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC187A0A096LP49 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.01■■□□□ 1.43
CCDC187A0A096LP49 SMPD5-203ENST00000639008 1464 ntBASIC24■■□□□ 1.43
CCDC187A0A096LP49 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC187A0A096LP49 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.99■■□□□ 1.43
CCDC187A0A096LP49 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC187A0A096LP49 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.99■■□□□ 1.43
CCDC187A0A096LP49 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CCDC187A0A096LP49 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
CCDC187A0A096LP49 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CCDC187A0A096LP49 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC187A0A096LP49 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CCDC187A0A096LP49 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC187A0A096LP49 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.98■■□□□ 1.43
CCDC187A0A096LP49 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC187A0A096LP49 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CCDC187A0A096LP49 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CCDC187A0A096LP49 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.97■■□□□ 1.43
CCDC187A0A096LP49 DUX4L18-201ENST00000553347 1267 ntBASIC23.97■■□□□ 1.43
CCDC187A0A096LP49 AL359258.2-201ENST00000564063 1566 ntBASIC23.97■■□□□ 1.43
CCDC187A0A096LP49 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC23.96■■□□□ 1.43
CCDC187A0A096LP49 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
CCDC187A0A096LP49 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
CCDC187A0A096LP49 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.95■■□□□ 1.43
CCDC187A0A096LP49 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.95■■□□□ 1.42
CCDC187A0A096LP49 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.95■■□□□ 1.42
CCDC187A0A096LP49 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.95■■□□□ 1.42
CCDC187A0A096LP49 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CCDC187A0A096LP49 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC187A0A096LP49 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC187A0A096LP49 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC187A0A096LP49 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
CCDC187A0A096LP49 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
CCDC187A0A096LP49 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.94■■□□□ 1.42
CCDC187A0A096LP49 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
CCDC187A0A096LP49 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.92■■□□□ 1.42
CCDC187A0A096LP49 AC100797.4-201ENST00000631653 1827 ntBASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms