RNA–Protein interactions for RNA: YBR223W-A

YBR223W-A, Transcript of Dubious open reading frame, yeastyeast

Gene YBR223W-A, Length 120 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YBR223W-AYBR223W-A YBR056W-AI2HB52 66 aa0.15□□□□□ -2.39
YBR223W-AYBR223W-A FMP27Q06179 2628 aa-0.01□□□□□ -2.41
YBR223W-AYBR223W-A NUM1Q00402 2748 aa-0.03□□□□□ -2.41
YBR223W-AYBR223W-A MDN1Q12019 4910 aaKnown RBP-0.05□□□□□ -2.42
YBR223W-AYBR223W-A GCN1P33892 2672 aaKnown RBP-0.08□□□□□ -2.42
YBR223W-AYBR223W-A CSF1Q12150 2958 aa-0.08□□□□□ -2.42
YBR223W-AYBR223W-A IRA2P19158 3079 aa-0.11□□□□□ -2.43
YBR223W-AYBR223W-A YPR117WQ06116 2489 aa-0.12□□□□□ -2.43
YBR223W-AYBR223W-A TEL1P38110 2787 aa-0.13□□□□□ -2.43
YBR223W-AYBR223W-A PRP8P33334 2413 aaKnown RBP-0.13□□□□□ -2.43
YBR223W-AYBR223W-A NSR1P27476 414 aaKnown RBP RIP-Chip data-0.15□□□□□ -2.43not detected
YBR223W-AYBR223W-A TAO3P40468 2376 aa-0.15□□□□□ -2.43
YBR223W-AYBR223W-A TOR1P35169 2470 aa-0.17□□□□□ -2.44
YBR223W-AYBR223W-A TOM1Q03280 3268 aa-0.18□□□□□ -2.44
YBR223W-AYBR223W-A VPS13Q07878 3144 aa-0.18□□□□□ -2.44
YBR223W-AYBR223W-A TOR2P32600 2474 aaKnown RBP-0.18□□□□□ -2.44
YBR223W-AYBR223W-A IRA1P18963 3092 aa-0.2□□□□□ -2.44
YBR223W-AYBR223W-A UTP20P35194 2493 aaKnown RBP-0.21□□□□□ -2.44
YBR223W-AYBR223W-A FAB1P34756 2278 aa-0.23□□□□□ -2.45
YBR223W-AYBR223W-A TRA1P38811 3744 aa-0.26□□□□□ -2.45
YBR223W-AYBR223W-A DBP2P24783 546 aaKnown RBP-0.28□□□□□ -2.45
YBR223W-AYBR223W-A SKI2P35207 1287 aaKnown RBP RIP-Chip data-0.28□□□□□ -2.45not detected
YBR223W-AYBR223W-A NPL3Q01560 414 aaKnown RBP RIP-Chip data-0.28□□□□□ -2.45not detected
YBR223W-AYBR223W-A SEC16P48415 2195 aaKnown RBP-0.28□□□□□ -2.45
YBR223W-AYBR223W-A MEC1P38111 2368 aa-0.28□□□□□ -2.45
YBR223W-AYBR223W-A DYN1P36022 4092 aa-0.28□□□□□ -2.46
YBR223W-AYBR223W-A YDR344CQ05510 147 aa-0.29□□□□□ -2.46
YBR223W-AYBR223W-A ACC1Q00955 2233 aaKnown RBP-0.29□□□□□ -2.46
YBR223W-AYBR223W-A URA2P07259 2214 aaKnown RBP-0.3□□□□□ -2.46
YBR223W-AYBR223W-A NOP1P15646 327 aaKnown RBP-0.3□□□□□ -2.46
YBR223W-AYBR223W-A SEA4P38164 1038 aa-0.31□□□□□ -2.46
YBR223W-AYBR223W-A SNF2P22082 1703 aa-0.32□□□□□ -2.46
YBR223W-AYBR223W-A RGA2Q06407 1009 aa-0.32□□□□□ -2.46
YBR223W-AYBR223W-A YMR206WQ03695 313 aa-0.34□□□□□ -2.46
YBR223W-AYBR223W-A SCD6P45978 349 aaKnown RBP RIP-Chip data-0.35□□□□□ -2.47not detected
YBR223W-AYBR223W-A CUP1-1P0CX80 61 aa-0.37□□□□□ -2.47
YBR223W-AYBR223W-A CUP1-2P0CX81 61 aa-0.37□□□□□ -2.47
YBR223W-AYBR223W-A SCJ1P25303 377 aa-0.37□□□□□ -2.47
YBR223W-AYBR223W-A GLT1Q12680 2145 aaKnown RBP-0.38□□□□□ -2.47
YBR223W-AYBR223W-A MPE1P35728 441 aaKnown RBP-0.38□□□□□ -2.47
YBR223W-AYBR223W-A LAS17Q12446 633 aa-0.38□□□□□ -2.47
YBR223W-AYBR223W-A HFA1P32874 2273 aa-0.39□□□□□ -2.47
YBR223W-AYBR223W-A PEX2P32800 271 aa-0.39□□□□□ -2.47
YBR223W-AYBR223W-A FAP1P53971 965 aa-0.39□□□□□ -2.47
YBR223W-AYBR223W-A ILV3P39522 585 aaKnown RBP-0.4□□□□□ -2.47
YBR223W-AYBR223W-A SEN1Q00416 2231 aaKnown RBP-0.41□□□□□ -2.47
YBR223W-AYBR223W-A AIR2Q12476 344 aaKnown RBP-0.41□□□□□ -2.48
YBR223W-AYBR223W-A BEM2P39960 2167 aaKnown RBP-0.42□□□□□ -2.48
YBR223W-AYBR223W-A POL2P21951 2222 aaKnown RBP-0.42□□□□□ -2.48
YBR223W-AYBR223W-A YEF3P16521 1044 aaKnown RBP-0.42□□□□□ -2.48
YBR223W-AYBR223W-A FKH1P40466 484 aa-0.42□□□□□ -2.48
YBR223W-AYBR223W-A ATS1P31386 333 aa-0.43□□□□□ -2.48
YBR223W-AYBR223W-A MOT2P34909 587 aaKnown RBP-0.43□□□□□ -2.48
YBR223W-AYBR223W-A UBA4P38820 440 aa-0.43□□□□□ -2.48
YBR223W-AYBR223W-A CLA4P48562 842 aa-0.43□□□□□ -2.48
YBR223W-AYBR223W-A SRC1Q03707 834 aa-0.43□□□□□ -2.48
YBR223W-AYBR223W-A DED1P06634 604 aaKnown RBP-0.44□□□□□ -2.48
YBR223W-AYBR223W-A SDH2P21801 266 aa-0.44□□□□□ -2.48
YBR223W-AYBR223W-A NAB2P32505 525 aaKnown RBP RIP-Chip data-0.44□□□□□ -2.48not detected
YBR223W-AYBR223W-A YKR023WP36119 530 aaKnown RBP-0.44□□□□□ -2.48
YBR223W-AYBR223W-A LSM4P40070 187 aaKnown RBP-0.44□□□□□ -2.48
YBR223W-AYBR223W-A PSP2P50109 593 aaKnown RBP-0.44□□□□□ -2.48
YBR223W-AYBR223W-A IGO1P53897 168 aa-0.44□□□□□ -2.48
YBR223W-AYBR223W-A RPS29AP41057 56 aaKnown RBP-0.45□□□□□ -2.48
YBR223W-AYBR223W-A DUR1,2P32528 1835 aaKnown RBP-0.45□□□□□ -2.48
YBR223W-AYBR223W-A RPO21P04050 1733 aaKnown RBP-0.46□□□□□ -2.48
YBR223W-AYBR223W-A KTR4P38131 464 aa-0.46□□□□□ -2.48
YBR223W-AYBR223W-A BOI2P39969 1040 aa-0.46□□□□□ -2.48
YBR223W-AYBR223W-A RRD1P40454 393 aaKnown RBP-0.46□□□□□ -2.48
YBR223W-AYBR223W-A ITT1Q04638 464 aa-0.46□□□□□ -2.48
YBR223W-AYBR223W-A GSC2P40989 1895 aa-0.46□□□□□ -2.48
YBR223W-AYBR223W-A RIF1P29539 1916 aa-0.48□□□□□ -2.49
YBR223W-AYBR223W-A ASH1P34233 588 aa-0.48□□□□□ -2.49
YBR223W-AYBR223W-A DRE2P36152 348 aa-0.48□□□□□ -2.49
YBR223W-AYBR223W-A ABZ1P37254 787 aaPredicted RBP-0.48□□□□□ -2.49
YBR223W-AYBR223W-A DUO1P53168 247 aaKnown RBP-0.48□□□□□ -2.49
YBR223W-AYBR223W-A CAF40P53829 373 aa-0.48□□□□□ -2.49
YBR223W-AYBR223W-A TYW1Q08960 810 aaKnown RBP-0.48□□□□□ -2.49
YBR223W-AYBR223W-A RPS2P25443 254 aaKnown RBP-0.49□□□□□ -2.49
YBR223W-AYBR223W-A UTR2P32623 467 aa-0.49□□□□□ -2.49
YBR223W-AYBR223W-A YPR015CQ12531 247 aa-0.49□□□□□ -2.49
YBR223W-AYBR223W-A FAS1P07149 2051 aaKnown RBP-0.49□□□□□ -2.49
YBR223W-AYBR223W-A SBP1P10080 294 aaKnown RBP-0.5□□□□□ -2.49
YBR223W-AYBR223W-A MBR1P23493 339 aa-0.5□□□□□ -2.49
YBR223W-AYBR223W-A SIS1P25294 352 aaKnown RBP-0.5□□□□□ -2.49
YBR223W-AYBR223W-A GAR1P28007 205 aaKnown RBP-0.5□□□□□ -2.49
YBR223W-AYBR223W-A PSD2P53037 1138 aaKnown RBP-0.5□□□□□ -2.49
YBR223W-AYBR223W-A RIM15P43565 1770 aa-0.5□□□□□ -2.49
YBR223W-AYBR223W-A TIF3P34167 436 aaKnown RBP-0.51□□□□□ -2.49
YBR223W-AYBR223W-A MTC4P38335 694 aaKnown RBP-0.51□□□□□ -2.49
YBR223W-AYBR223W-A YLR278CQ05854 1341 aa-0.51□□□□□ -2.49
YBR223W-AYBR223W-A ERF2Q06551 359 aa-0.51□□□□□ -2.49
YBR223W-AYBR223W-A SEC23P15303 768 aaKnown RBP-0.52□□□□□ -2.49
YBR223W-AYBR223W-A PKC1P24583 1151 aa-0.52□□□□□ -2.49
YBR223W-AYBR223W-A YJL068CP40363 299 aa-0.52□□□□□ -2.49
YBR223W-AYBR223W-A LSB3P43603 459 aaKnown RBP-0.52□□□□□ -2.49
YBR223W-AYBR223W-A HEF3P53978 1044 aaKnown RBP-0.52□□□□□ -2.49
YBR223W-AYBR223W-A GLO2Q05584 274 aa-0.52□□□□□ -2.49
YBR223W-AYBR223W-A TFC6Q06339 672 aa-0.52□□□□□ -2.49
YBR223W-AYBR223W-A FRT1Q99332 602 aa-0.52□□□□□ -2.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms