RNA–Protein interactions for RNA: ENST00000641043.1

SAMMSON-205, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

Gene SAMMSON, Length 1,377 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-205ENST00000641043 AEBP2Q6ZN18 517 aaPredicted RBP23.17■■□□□ 1.3
SAMMSON-205ENST00000641043 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
SAMMSON-205ENST00000641043 SENP3Q9H4L4 574 aaPredicted RBP19.83■□□□□ 0.76
SAMMSON-205ENST00000641043 PHF23Q9BUL5 403 aaPredicted RBP19.46■□□□□ 0.71
SAMMSON-205ENST00000641043 FOXD1Q16676 465 aa18.48■□□□□ 0.55
SAMMSON-205ENST00000641043 POTEDQ86YR6 584 aa18.01■□□□□ 0.47
SAMMSON-205ENST00000641043 MSH5O43196 834 aa17.61■□□□□ 0.41
SAMMSON-205ENST00000641043 PIAS4Q8N2W9 510 aaPredicted RBP17.17■□□□□ 0.34
SAMMSON-205ENST00000641043 PPP6R1Q9UPN7 881 aa17.08■□□□□ 0.32
SAMMSON-205ENST00000641043 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
SAMMSON-205ENST00000641043 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
SAMMSON-205ENST00000641043 ADRA2BP18089 450 aa16.98■□□□□ 0.31
SAMMSON-205ENST00000641043 ABCC9O60706 1549 aa16.56■□□□□ 0.24
SAMMSON-205ENST00000641043 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
SAMMSON-205ENST00000641043 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
SAMMSON-205ENST00000641043 CCDC180Q9P1Z9 1646 aa15.61■□□□□ 0.09
SAMMSON-205ENST00000641043 DMRT2Q9Y5R5 561 aa15.58■□□□□ 0.08
SAMMSON-205ENST00000641043 SCAF1Q9H7N4 1312 aaKnown RBP15.48■□□□□ 0.07
SAMMSON-205ENST00000641043 DNAJC5Q9H3Z4 198 aa15.48■□□□□ 0.07
SAMMSON-205ENST00000641043 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
SAMMSON-205ENST00000641043 PABPN1Q86U42 306 aaKnown RBP eCLIP15.32■□□□□ 0.04
SAMMSON-205ENST00000641043 RB1CC1Q8TDY2 1594 aa15.29■□□□□ 0.04
SAMMSON-205ENST00000641043 DCAF8L1A6NGE4 600 aa15.07■□□□□ 0
SAMMSON-205ENST00000641043 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
SAMMSON-205ENST00000641043 NACADO15069 1562 aa14.96□□□□□ -0.01
SAMMSON-205ENST00000641043 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.02
SAMMSON-205ENST00000641043 PPP4R3CPQ6ZMV5 832 aa14.94□□□□□ -0.02
SAMMSON-205ENST00000641043 BICRAQ9NZM4 1560 aa14.92□□□□□ -0.02
SAMMSON-205ENST00000641043 DCAF8L2P0C7V8 631 aa14.88□□□□□ -0.03
SAMMSON-205ENST00000641043 HOXD11P31277 338 aaPredicted RBP14.86□□□□□ -0.03
SAMMSON-205ENST00000641043 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
SAMMSON-205ENST00000641043 CC2D2AQ9P2K1 1620 aa14.86□□□□□ -0.03
SAMMSON-205ENST00000641043 C1QBPQ07021 282 aaKnown RBP14.7□□□□□ -0.06
SAMMSON-205ENST00000641043 CNKSR2Q8WXI2 1034 aa14.7□□□□□ -0.06
SAMMSON-205ENST00000641043 RNF216Q9NWF9 866 aaPredicted RBP14.65□□□□□ -0.06
SAMMSON-205ENST00000641043 EIF4G1Q04637 1599 aaKnown RBP14.62□□□□□ -0.07
SAMMSON-205ENST00000641043 TRIM41Q8WV44 630 aa14.56□□□□□ -0.08
SAMMSON-205ENST00000641043 CUX2O14529 1486 aa14.5□□□□□ -0.09
SAMMSON-205ENST00000641043 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
SAMMSON-205ENST00000641043 MYO15BQ96JP2 1530 aa14.42□□□□□ -0.1
SAMMSON-205ENST00000641043 ERCC6Q03468 1493 aa14.32□□□□□ -0.12
SAMMSON-205ENST00000641043 SCRIBQ14160 1630 aa14.3□□□□□ -0.12
SAMMSON-205ENST00000641043 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.18□□□□□ -0.14
SAMMSON-205ENST00000641043 NCBP3Q53F19 620 aaKnown RBP14.17□□□□□ -0.14
SAMMSON-205ENST00000641043 NPM3O75607 178 aaKnown RBP14.08□□□□□ -0.16
SAMMSON-205ENST00000641043 POTEHQ6S545 545 aa14.05□□□□□ -0.16
SAMMSON-205ENST00000641043 NESP48681 1621 aa14□□□□□ -0.17
SAMMSON-205ENST00000641043 ZCCHC6Q5VYS8 1495 aaKnown RBP13.96□□□□□ -0.17
SAMMSON-205ENST00000641043 DCAF1Q9Y4B6 1507 aa13.96□□□□□ -0.17
SAMMSON-205ENST00000641043 THOC2Q8NI27 1593 aaKnown RBP13.96□□□□□ -0.17
SAMMSON-205ENST00000641043 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
SAMMSON-205ENST00000641043 SMARCA2P51531 1590 aa13.86□□□□□ -0.19
SAMMSON-205ENST00000641043 NCAPD3P42695 1498 aa13.83□□□□□ -0.19
SAMMSON-205ENST00000641043 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
SAMMSON-205ENST00000641043 CAPN15O75808 1086 aa13.77□□□□□ -0.21
SAMMSON-205ENST00000641043 DSG3P32926 999 aa13.77□□□□□ -0.21
SAMMSON-205ENST00000641043 BAZ1AQ9NRL2 1556 aaPredicted RBP13.77□□□□□ -0.21
SAMMSON-205ENST00000641043 KIF21AQ7Z4S6 1674 aa13.75□□□□□ -0.21
SAMMSON-205ENST00000641043 OSCARQ8IYS5 282 aa13.73□□□□□ -0.21
SAMMSON-205ENST00000641043 ATAD2BQ9ULI0 1458 aa13.72□□□□□ -0.21
SAMMSON-205ENST00000641043 RIMBP3CA6NJZ7 1639 aa13.69□□□□□ -0.22
SAMMSON-205ENST00000641043 RIMBP3BA6NNM3 1639 aa13.69□□□□□ -0.22
SAMMSON-205ENST00000641043 RIMBP3Q9UFD9 1639 aa13.69□□□□□ -0.22
SAMMSON-205ENST00000641043 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
SAMMSON-205ENST00000641043 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
SAMMSON-205ENST00000641043 HMGXB3Q12766 1538 aa13.65□□□□□ -0.22
SAMMSON-205ENST00000641043 PDS5BQ9NTI5 1447 aa13.61□□□□□ -0.23
SAMMSON-205ENST00000641043 MRC2Q9UBG0 1479 aa13.58□□□□□ -0.24
SAMMSON-205ENST00000641043 SLC4A2P04920 1241 aa13.56□□□□□ -0.24
SAMMSON-205ENST00000641043 WDR62O43379 1518 aa13.55□□□□□ -0.24
SAMMSON-205ENST00000641043 BAZ1BQ9UIG0 1483 aaKnown RBP13.55□□□□□ -0.24
SAMMSON-205ENST00000641043 ARHGEF11O15085 1522 aa13.54□□□□□ -0.24
SAMMSON-205ENST00000641043 CYB5RLQ6IPT4 315 aa13.54□□□□□ -0.24
SAMMSON-205ENST00000641043 KCNA4P22459 653 aa13.53□□□□□ -0.24
SAMMSON-205ENST00000641043 APLP2Q06481 763 aa13.52□□□□□ -0.25
SAMMSON-205ENST00000641043 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
SAMMSON-205ENST00000641043 ABCB7O75027 752 aa13.45□□□□□ -0.26
SAMMSON-205ENST00000641043 ILDR1Q86SU0 546 aaPredicted RBP13.45□□□□□ -0.26
SAMMSON-205ENST00000641043 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
SAMMSON-205ENST00000641043 CADPSQ9ULU8 1353 aa13.4□□□□□ -0.26
SAMMSON-205ENST00000641043 ARAP1Q96P48 1450 aa13.38□□□□□ -0.27
SAMMSON-205ENST00000641043 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
SAMMSON-205ENST00000641043 PEG3Q9GZU2 1588 aa13.31□□□□□ -0.28
SAMMSON-205ENST00000641043 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.31□□□□□ -0.28
SAMMSON-205ENST00000641043 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
SAMMSON-205ENST00000641043 FANCD2Q9BXW9 1451 aa13.28□□□□□ -0.28
SAMMSON-205ENST00000641043 RBM42Q9BTD8 480 aaKnown RBP13.28□□□□□ -0.28
SAMMSON-205ENST00000641043 URB2Q14146 1524 aaKnown RBP13.25□□□□□ -0.29
SAMMSON-205ENST00000641043 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
SAMMSON-205ENST00000641043 MROH2BQ7Z745 1585 aa13.19□□□□□ -0.3
SAMMSON-205ENST00000641043 SAMD1Q6SPF0 538 aaPredicted RBP13.17□□□□□ -0.3
SAMMSON-205ENST00000641043 CHD1O14646 1710 aa13.15□□□□□ -0.3
SAMMSON-205ENST00000641043 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
SAMMSON-205ENST00000641043 FBLN2P98095 1184 aa13.12□□□□□ -0.31
SAMMSON-205ENST00000641043 IFT140Q96RY7 1462 aa13.11□□□□□ -0.31
SAMMSON-205ENST00000641043 CHRDL2Q6WN34 429 aa13.1□□□□□ -0.31
SAMMSON-205ENST00000641043 EIF4G3O43432 1585 aaKnown RBP13.08□□□□□ -0.31
SAMMSON-205ENST00000641043 CFTRP13569 1480 aa13.07□□□□□ -0.32
SAMMSON-205ENST00000641043 POLA2Q14181 598 aa13.03□□□□□ -0.32
SAMMSON-205ENST00000641043 AQRO60306 1485 aaKnown RBP eCLIP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms