RNA–Protein interactions for RNA: ENST00000640791.1

SCN2A-218, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,169 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-218ENST00000640791 MYO15BQ96JP2 1530 aa4.52□□□□□ -1.69
SCN2A-218ENST00000640791 NISCHQ9Y2I1 1504 aa4.36□□□□□ -1.71
SCN2A-218ENST00000640791 DCAF1Q9Y4B6 1507 aa4.27□□□□□ -1.73
SCN2A-218ENST00000640791 SHROOM4Q9ULL8 1493 aa4.27□□□□□ -1.73
SCN2A-218ENST00000640791 BICRAQ9NZM4 1560 aa3.97□□□□□ -1.77
SCN2A-218ENST00000640791 PEG3Q9GZU2 1588 aa3.9□□□□□ -1.78
SCN2A-218ENST00000640791 CCDC180Q9P1Z9 1646 aa3.89□□□□□ -1.79
SCN2A-218ENST00000640791 ZCCHC6Q5VYS8 1495 aaKnown RBP3.84□□□□□ -1.79
SCN2A-218ENST00000640791 DNAJC5BQ9UF47 199 aa3.79□□□□□ -1.8
SCN2A-218ENST00000640791 NACADO15069 1562 aa3.75□□□□□ -1.81
SCN2A-218ENST00000640791 NCAPD3P42695 1498 aa3.75□□□□□ -1.81
SCN2A-218ENST00000640791 RYR1P21817 5038 aa3.7□□□□□ -1.82
SCN2A-218ENST00000640791 EIF4G1Q04637 1599 aaKnown RBP3.64□□□□□ -1.83
SCN2A-218ENST00000640791 HMGXB3Q12766 1538 aa3.61□□□□□ -1.83
SCN2A-218ENST00000640791 CUX2O14529 1486 aa3.45□□□□□ -1.86
SCN2A-218ENST00000640791 ATAD2BQ9ULI0 1458 aa3.44□□□□□ -1.86
SCN2A-218ENST00000640791 BAZ1BQ9UIG0 1483 aaKnown RBP3.42□□□□□ -1.86
SCN2A-218ENST00000640791 CFTRP13569 1480 aa3.41□□□□□ -1.86
SCN2A-218ENST00000640791 THOC2Q8NI27 1593 aaKnown RBP3.4□□□□□ -1.86
SCN2A-218ENST00000640791 KDM5BQ9UGL1 1544 aa3.39□□□□□ -1.87
SCN2A-218ENST00000640791 RB1CC1Q8TDY2 1594 aa3.37□□□□□ -1.87
SCN2A-218ENST00000640791 WDR62O43379 1518 aa3.36□□□□□ -1.87
SCN2A-218ENST00000640791 COL17A1Q9UMD9 1497 aaPredicted RBP3.35□□□□□ -1.87
SCN2A-218ENST00000640791 CLASP1Q7Z460 1538 aa3.33□□□□□ -1.88
SCN2A-218ENST00000640791 SMARCA2P51531 1590 aa3.32□□□□□ -1.88
SCN2A-218ENST00000640791 CECR2Q9BXF3 1484 aa3.3□□□□□ -1.88
SCN2A-218ENST00000640791 NUP160Q12769 1436 aa3.3□□□□□ -1.88
SCN2A-218ENST00000640791 WDR97A6NE52 1622 aa3.29□□□□□ -1.88
SCN2A-218ENST00000640791 PCLOQ9Y6V0 5065 aa3.29□□□□□ -1.88
SCN2A-218ENST00000640791 RUSC2Q8N2Y8 1516 aa3.28□□□□□ -1.88
SCN2A-218ENST00000640791 AEBP2Q6ZN18 517 aaPredicted RBP3.28□□□□□ -1.88
SCN2A-218ENST00000640791 ABCC9O60706 1549 aa3.28□□□□□ -1.88
SCN2A-218ENST00000640791 CADPSQ9ULU8 1353 aa3.28□□□□□ -1.88
SCN2A-218ENST00000640791 DNAJC5Q9H3Z4 198 aa3.25□□□□□ -1.89
SCN2A-218ENST00000640791 RSF1Q96T23 1441 aaPredicted RBP3.24□□□□□ -1.89
SCN2A-218ENST00000640791 SHROOM2Q13796 1616 aa3.23□□□□□ -1.89
SCN2A-218ENST00000640791 NESP48681 1621 aa3.23□□□□□ -1.89
SCN2A-218ENST00000640791 PELP1Q8IZL8 1130 aaKnown RBP3.23□□□□□ -1.89
SCN2A-218ENST00000640791 MROH2BQ7Z745 1585 aa3.22□□□□□ -1.89
SCN2A-218ENST00000640791 MYT1Q01538 1121 aa3.21□□□□□ -1.9
SCN2A-218ENST00000640791 SCRIBQ14160 1630 aa3.2□□□□□ -1.9
SCN2A-218ENST00000640791 UNC13AQ9UPW8 1703 aa3.2□□□□□ -1.9
SCN2A-218ENST00000640791 TARBP1Q13395 1621 aaKnown RBP3.19□□□□□ -1.9
SCN2A-218ENST00000640791 URB2Q14146 1524 aaKnown RBP3.19□□□□□ -1.9
SCN2A-218ENST00000640791 PRAG1Q86YV5 1406 aa3.19□□□□□ -1.9
SCN2A-218ENST00000640791 BAZ1AQ9NRL2 1556 aaPredicted RBP3.19□□□□□ -1.9
SCN2A-218ENST00000640791 ZNF518AQ6AHZ1 1483 aa3.18□□□□□ -1.9
SCN2A-218ENST00000640791 ABCA10Q8WWZ4 1543 aa3.16□□□□□ -1.9
SCN2A-218ENST00000640791 LAMC3Q9Y6N6 1575 aa3.16□□□□□ -1.9
SCN2A-218ENST00000640791 ZNF608Q9ULD9 1512 aaPredicted RBP3.15□□□□□ -1.9
SCN2A-218ENST00000640791 SMARCA4P51532 1647 aa3.14□□□□□ -1.91
SCN2A-218ENST00000640791 TOP2AP11388 1531 aaKnown RBP3.12□□□□□ -1.91
SCN2A-218ENST00000640791 CC2D2AQ9P2K1 1620 aa3.12□□□□□ -1.91
SCN2A-218ENST00000640791 KAT6BQ8WYB5 2073 aa3.11□□□□□ -1.91
SCN2A-218ENST00000640791 UHRF1BP1LA0JNW5 1464 aa3.11□□□□□ -1.91
SCN2A-218ENST00000640791 TOP2BQ02880 1626 aa3.11□□□□□ -1.91
SCN2A-218ENST00000640791 ZEB1P37275 1124 aaPredicted RBP3.1□□□□□ -1.91
SCN2A-218ENST00000640791 ABCA5Q8WWZ7 1642 aa3.1□□□□□ -1.91
SCN2A-218ENST00000640791 KDM6BO15054 1643 aa3.1□□□□□ -1.91
SCN2A-218ENST00000640791 ALKQ9UM73 1620 aa3.09□□□□□ -1.92
SCN2A-218ENST00000640791 MAPKBP1O60336 1514 aa3.09□□□□□ -1.92
SCN2A-218ENST00000640791 PRXQ9BXM0 1461 aa3.08□□□□□ -1.92
SCN2A-218ENST00000640791 ARHGEF11O15085 1522 aa3.08□□□□□ -1.92
SCN2A-218ENST00000640791 GLI2P10070 1586 aa3.07□□□□□ -1.92
SCN2A-218ENST00000640791 PRDM2Q13029 1718 aa3.06□□□□□ -1.92
SCN2A-218ENST00000640791 CCER1Q8TC90 406 aaPredicted RBP3.06□□□□□ -1.92
SCN2A-218ENST00000640791 ARAP1Q96P48 1450 aa3.05□□□□□ -1.92
SCN2A-218ENST00000640791 REREQ9P2R6 1566 aa3.05□□□□□ -1.92
SCN2A-218ENST00000640791 FAM9AQ8IZU1 332 aaPredicted RBP3.05□□□□□ -1.92
SCN2A-218ENST00000640791 ARAP3Q8WWN8 1544 aa3.05□□□□□ -1.92
SCN2A-218ENST00000640791 CAMSAP2Q08AD1 1489 aa3.05□□□□□ -1.92
SCN2A-218ENST00000640791 IFT140Q96RY7 1462 aa3.05□□□□□ -1.92
SCN2A-218ENST00000640791 ERICH3Q5RHP9 1530 aa3.04□□□□□ -1.92
SCN2A-218ENST00000640791 RYR2Q92736 4967 aa3.03□□□□□ -1.92
SCN2A-218ENST00000640791 MRC2Q9UBG0 1479 aa3.01□□□□□ -1.93
SCN2A-218ENST00000640791 POLA1P09884 1462 aaPredicted RBP3.01□□□□□ -1.93
SCN2A-218ENST00000640791 TOPBP1Q92547 1522 aa3□□□□□ -1.93
SCN2A-218ENST00000640791 DISP1Q96F81 1524 aa3□□□□□ -1.93
SCN2A-218ENST00000640791 CENPBP07199 599 aaPredicted RBP2.99□□□□□ -1.93
SCN2A-218ENST00000640791 APLP2Q06481 763 aa2.98□□□□□ -1.93
SCN2A-218ENST00000640791 PLB1Q6P1J6 1458 aa2.98□□□□□ -1.93
SCN2A-218ENST00000640791 HYDINQ4G0P3 5121 aa2.98□□□□□ -1.93
SCN2A-218ENST00000640791 CUX1P39880 1505 aa2.97□□□□□ -1.93
SCN2A-218ENST00000640791 YTHDC1Q96MU7 727 aaKnown RBP2.97□□□□□ -1.93
SCN2A-218ENST00000640791 KDM5DQ9BY66 1539 aa2.96□□□□□ -1.94
SCN2A-218ENST00000640791 VWDEQ8N2E2 1590 aa2.96□□□□□ -1.94
SCN2A-218ENST00000640791 DNMBPQ6XZF7 1577 aa2.96□□□□□ -1.94
SCN2A-218ENST00000640791 SNAPC4Q5SXM2 1469 aa2.95□□□□□ -1.94
SCN2A-218ENST00000640791 BIVM-ERCC5R4GMW8 1640 aa2.95□□□□□ -1.94
SCN2A-218ENST00000640791 SETD1BQ9UPS6 1966 aaKnown RBP2.94□□□□□ -1.94
SCN2A-218ENST00000640791 TTBK1Q5TCY1 1321 aaPredicted RBP2.94□□□□□ -1.94
SCN2A-218ENST00000640791 ZMYM4Q5VZL5 1548 aa2.94□□□□□ -1.94
SCN2A-218ENST00000640791 MAGI1Q96QZ7 1491 aaPredicted RBP2.94□□□□□ -1.94
SCN2A-218ENST00000640791 CCDC88BA6NC98 1476 aa2.93□□□□□ -1.94
SCN2A-218ENST00000640791 AGLP35573 1532 aa2.93□□□□□ -1.94
SCN2A-218ENST00000640791 MAGI3Q5TCQ9 1506 aa2.93□□□□□ -1.94
SCN2A-218ENST00000640791 FRMPD1Q5SYB0 1578 aa2.93□□□□□ -1.94
SCN2A-218ENST00000640791 ABCC10Q5T3U5 1492 aa2.93□□□□□ -1.94
SCN2A-218ENST00000640791 ADAMTS12P58397 1594 aa2.93□□□□□ -1.94
SCN2A-218ENST00000640791 UGGT2Q9NYU1 1516 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms