RNA–Protein interactions for RNA: ENST00000640525.1

RTTN-219, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,136 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-219ENST00000640525 AEBP2Q6ZN18 517 aaPredicted RBP15.13■□□□□ 0.01
RTTN-219ENST00000640525 CHIC1Q5VXU3 224 aa14.71□□□□□ -0.05
RTTN-219ENST00000640525 PHF23Q9BUL5 403 aaPredicted RBP13.11□□□□□ -0.31
RTTN-219ENST00000640525 SENP3Q9H4L4 574 aaPredicted RBP12.73□□□□□ -0.37
RTTN-219ENST00000640525 POTEDQ86YR6 584 aa12.64□□□□□ -0.39
RTTN-219ENST00000640525 NISCHQ9Y2I1 1504 aa12.02□□□□□ -0.49
RTTN-219ENST00000640525 PLPPR3Q6T4P5 718 aa11.93□□□□□ -0.5
RTTN-219ENST00000640525 FOXD1Q16676 465 aa11.85□□□□□ -0.51
RTTN-219ENST00000640525 PPP6R1Q9UPN7 881 aa11.59□□□□□ -0.55
RTTN-219ENST00000640525 ADRA2BP18089 450 aa11.54□□□□□ -0.56
RTTN-219ENST00000640525 MSH5O43196 834 aa11.15□□□□□ -0.62
RTTN-219ENST00000640525 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
RTTN-219ENST00000640525 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
RTTN-219ENST00000640525 KCNA4P22459 653 aa10.58□□□□□ -0.72
RTTN-219ENST00000640525 CCDC180Q9P1Z9 1646 aa10.52□□□□□ -0.73
RTTN-219ENST00000640525 MAPK8IP2Q13387 824 aaPredicted RBP10.49□□□□□ -0.73
RTTN-219ENST00000640525 SCAF1Q9H7N4 1312 aaKnown RBP10.26□□□□□ -0.77
RTTN-219ENST00000640525 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
RTTN-219ENST00000640525 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.78
RTTN-219ENST00000640525 ABCC9O60706 1549 aa10.19□□□□□ -0.78
RTTN-219ENST00000640525 NCBP3Q53F19 620 aaKnown RBP10.19□□□□□ -0.78
RTTN-219ENST00000640525 CACNB1Q02641 598 aaPredicted RBP10.15□□□□□ -0.79
RTTN-219ENST00000640525 DMRT2Q9Y5R5 561 aa10.1□□□□□ -0.79
RTTN-219ENST00000640525 DCAF8L2P0C7V8 631 aa10.09□□□□□ -0.79
RTTN-219ENST00000640525 ZCCHC6Q5VYS8 1495 aaKnown RBP10.05□□□□□ -0.8
RTTN-219ENST00000640525 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
RTTN-219ENST00000640525 RNF216Q9NWF9 866 aaPredicted RBP9.97□□□□□ -0.81
RTTN-219ENST00000640525 EHMT2Q96KQ7 1210 aa9.95□□□□□ -0.82
RTTN-219ENST00000640525 HOXD11P31277 338 aaPredicted RBP9.94□□□□□ -0.82
RTTN-219ENST00000640525 DCAF1Q9Y4B6 1507 aa9.88□□□□□ -0.83
RTTN-219ENST00000640525 NACADO15069 1562 aa9.85□□□□□ -0.83
RTTN-219ENST00000640525 RB1CC1Q8TDY2 1594 aa9.82□□□□□ -0.84
RTTN-219ENST00000640525 MYO15BQ96JP2 1530 aa9.81□□□□□ -0.84
RTTN-219ENST00000640525 ZBTB22O15209 634 aa9.8□□□□□ -0.84
RTTN-219ENST00000640525 SHROOM4Q9ULL8 1493 aa9.8□□□□□ -0.84
RTTN-219ENST00000640525 CSRNP3Q8WYN3 585 aa9.77□□□□□ -0.85
RTTN-219ENST00000640525 DCAF8L1A6NGE4 600 aa9.74□□□□□ -0.85
RTTN-219ENST00000640525 SCRIBQ14160 1630 aa9.73□□□□□ -0.85
RTTN-219ENST00000640525 DNAJC5BQ9UF47 199 aa9.73□□□□□ -0.85
RTTN-219ENST00000640525 POTEHQ6S545 545 aa9.71□□□□□ -0.86
RTTN-219ENST00000640525 SLC4A2P04920 1241 aa9.7□□□□□ -0.86
RTTN-219ENST00000640525 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
RTTN-219ENST00000640525 PABPN1Q86U42 306 aaKnown RBP eCLIP9.61□□□□□ -0.87
RTTN-219ENST00000640525 FOXD4L1Q9NU39 408 aa9.55□□□□□ -0.88
RTTN-219ENST00000640525 BICRAQ9NZM4 1560 aa9.54□□□□□ -0.88
RTTN-219ENST00000640525 RNF39Q9H2S5 420 aa9.49□□□□□ -0.89
RTTN-219ENST00000640525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.47□□□□□ -0.89
RTTN-219ENST00000640525 U3KPZ7 1027 aaPredicted RBP9.41□□□□□ -0.9
RTTN-219ENST00000640525 CECR2Q9BXF3 1484 aa9.4□□□□□ -0.91
RTTN-219ENST00000640525 C1QBPQ07021 282 aaKnown RBP9.37□□□□□ -0.91
RTTN-219ENST00000640525 SUPT5HO00267 1087 aaKnown RBP9.34□□□□□ -0.91
RTTN-219ENST00000640525 MYCNP04198 464 aaPredicted RBP9.33□□□□□ -0.92
RTTN-219ENST00000640525 ATF5Q9Y2D1 282 aaPredicted RBP9.32□□□□□ -0.92
RTTN-219ENST00000640525 MROH2BQ7Z745 1585 aa9.31□□□□□ -0.92
RTTN-219ENST00000640525 BAZ1AQ9NRL2 1556 aaPredicted RBP9.28□□□□□ -0.92
RTTN-219ENST00000640525 RSF1Q96T23 1441 aaPredicted RBP9.28□□□□□ -0.92
RTTN-219ENST00000640525 SMARCA4P51532 1647 aa9.27□□□□□ -0.92
RTTN-219ENST00000640525 EIF4G1Q04637 1599 aaKnown RBP9.27□□□□□ -0.93
RTTN-219ENST00000640525 WIZO95785 1651 aa9.23□□□□□ -0.93
RTTN-219ENST00000640525 SPINK5Q9NQ38 1064 aaPredicted RBP9.19□□□□□ -0.94
RTTN-219ENST00000640525 CC2D2AQ9P2K1 1620 aa9.18□□□□□ -0.94
RTTN-219ENST00000640525 ATAD2BQ9ULI0 1458 aa9.17□□□□□ -0.94
RTTN-219ENST00000640525 SMARCA2P51531 1590 aa9.14□□□□□ -0.95
RTTN-219ENST00000640525 PEG3Q9GZU2 1588 aa9.13□□□□□ -0.95
RTTN-219ENST00000640525 BAZ1BQ9UIG0 1483 aaKnown RBP9.12□□□□□ -0.95
RTTN-219ENST00000640525 SAMD1Q6SPF0 538 aaPredicted RBP9.11□□□□□ -0.95
RTTN-219ENST00000640525 ATXN8OSP0DMR3 200 aa9.11□□□□□ -0.95
RTTN-219ENST00000640525 NCAPD3P42695 1498 aa9.1□□□□□ -0.95
RTTN-219ENST00000640525 TOP2AP11388 1531 aaKnown RBP9.09□□□□□ -0.95
RTTN-219ENST00000640525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.09□□□□□ -0.95
RTTN-219ENST00000640525 HNRNPUL2Q1KMD3 747 aaKnown RBP9.09□□□□□ -0.95
RTTN-219ENST00000640525 TRHP20396 242 aaPredicted RBP9.06□□□□□ -0.96
RTTN-219ENST00000640525 HMGXB3Q12766 1538 aa9.06□□□□□ -0.96
RTTN-219ENST00000640525 CAPN15O75808 1086 aa9.04□□□□□ -0.96
RTTN-219ENST00000640525 CCDC88BA6NC98 1476 aa9.02□□□□□ -0.96
RTTN-219ENST00000640525 ZNF219Q9P2Y4 722 aaPredicted RBP9□□□□□ -0.97
RTTN-219ENST00000640525 ABCB7O75027 752 aa8.96□□□□□ -0.98
RTTN-219ENST00000640525 POLA2Q14181 598 aa8.95□□□□□ -0.98
RTTN-219ENST00000640525 NESP48681 1621 aa8.9□□□□□ -0.98
RTTN-219ENST00000640525 DSG3P32926 999 aa8.89□□□□□ -0.99
RTTN-219ENST00000640525 APLP2Q06481 763 aa8.88□□□□□ -0.99
RTTN-219ENST00000640525 CADPSQ9ULU8 1353 aa8.87□□□□□ -0.99
RTTN-219ENST00000640525 MKRN4PQ13434 485 aaPredicted RBP8.87□□□□□ -0.99
RTTN-219ENST00000640525 CFTRP13569 1480 aa8.86□□□□□ -0.99
RTTN-219ENST00000640525 ABCC8Q09428 1581 aa8.81□□□□□ -1
RTTN-219ENST00000640525 LAMC3Q9Y6N6 1575 aa8.81□□□□□ -1
RTTN-219ENST00000640525 FANCD2Q9BXW9 1451 aa8.79□□□□□ -1
RTTN-219ENST00000640525 PRDM2Q13029 1718 aa8.77□□□□□ -1.01
RTTN-219ENST00000640525 FKBP8Q14318 412 aa8.77□□□□□ -1.01
RTTN-219ENST00000640525 PDS5BQ9NTI5 1447 aa8.76□□□□□ -1.01
RTTN-219ENST00000640525 KIF21AQ7Z4S6 1674 aa8.76□□□□□ -1.01
RTTN-219ENST00000640525 TRIM41Q8WV44 630 aa8.75□□□□□ -1.01
RTTN-219ENST00000640525 CEP164Q9UPV0 1460 aa8.74□□□□□ -1.01
RTTN-219ENST00000640525 ERCC6Q03468 1493 aa8.74□□□□□ -1.01
RTTN-219ENST00000640525 WRNQ14191 1432 aaPredicted RBP eCLIP8.73□□□□□ -1.01
RTTN-219ENST00000640525 SYNJ1O43426 1573 aa8.72□□□□□ -1.01
RTTN-219ENST00000640525 CUX1P39880 1505 aa8.71□□□□□ -1.02
RTTN-219ENST00000640525 URB2Q14146 1524 aaKnown RBP8.7□□□□□ -1.02
RTTN-219ENST00000640525 MRC2Q9UBG0 1479 aa8.67□□□□□ -1.02
RTTN-219ENST00000640525 TOPBP1Q92547 1522 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms