RNA–Protein interactions for RNA: ENST00000637855.1

ARHGEF9-236, Transcript of Cdc42 guanine nucleotide exchange factor 9, humanhuman

TSL 5

Gene ARHGEF9, Length 2,455 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9-236ENST00000637855 NISCHQ9Y2I1 1504 aa17.75■□□□□ 0.43
ARHGEF9-236ENST00000637855 CCDC180Q9P1Z9 1646 aa15.87■□□□□ 0.13
ARHGEF9-236ENST00000637855 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
ARHGEF9-236ENST00000637855 ABCC9O60706 1549 aa15.1■□□□□ 0.01
ARHGEF9-236ENST00000637855 MYT1Q01538 1121 aa15.05■□□□□ 0
ARHGEF9-236ENST00000637855 ZCCHC6Q5VYS8 1495 aaKnown RBP14.96□□□□□ -0.01
ARHGEF9-236ENST00000637855 PELP1Q8IZL8 1130 aaKnown RBP14.95□□□□□ -0.02
ARHGEF9-236ENST00000637855 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
ARHGEF9-236ENST00000637855 NACADO15069 1562 aa14.88□□□□□ -0.03
ARHGEF9-236ENST00000637855 DCAF1Q9Y4B6 1507 aa14.87□□□□□ -0.03
ARHGEF9-236ENST00000637855 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
ARHGEF9-236ENST00000637855 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
ARHGEF9-236ENST00000637855 SHROOM4Q9ULL8 1493 aa14.5□□□□□ -0.09
ARHGEF9-236ENST00000637855 UNC13AQ9UPW8 1703 aa14.35□□□□□ -0.11
ARHGEF9-236ENST00000637855 DCAF8L2P0C7V8 631 aa14.3□□□□□ -0.12
ARHGEF9-236ENST00000637855 BICRAQ9NZM4 1560 aa14.26□□□□□ -0.13
ARHGEF9-236ENST00000637855 PRKCSHP14314 528 aaPredicted RBP14.21□□□□□ -0.13
ARHGEF9-236ENST00000637855 APLP2Q06481 763 aa14.21□□□□□ -0.13
ARHGEF9-236ENST00000637855 DAXXQ9UER7 740 aaPredicted RBP14.19□□□□□ -0.14
ARHGEF9-236ENST00000637855 ERICH6Q7L0X2 663 aa14.18□□□□□ -0.14
ARHGEF9-236ENST00000637855 SCRIBQ14160 1630 aa14.13□□□□□ -0.15
ARHGEF9-236ENST00000637855 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
ARHGEF9-236ENST00000637855 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
ARHGEF9-236ENST00000637855 CC2D2AQ9P2K1 1620 aa13.79□□□□□ -0.2
ARHGEF9-236ENST00000637855 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
ARHGEF9-236ENST00000637855 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
ARHGEF9-236ENST00000637855 BAZ1AQ9NRL2 1556 aaPredicted RBP13.73□□□□□ -0.21
ARHGEF9-236ENST00000637855 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
ARHGEF9-236ENST00000637855 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
ARHGEF9-236ENST00000637855 SMARCA2P51531 1590 aa13.69□□□□□ -0.22
ARHGEF9-236ENST00000637855 PEG3Q9GZU2 1588 aa13.69□□□□□ -0.22
ARHGEF9-236ENST00000637855 SMARCA4P51532 1647 aa13.68□□□□□ -0.22
ARHGEF9-236ENST00000637855 NCAPD3P42695 1498 aa13.67□□□□□ -0.22
ARHGEF9-236ENST00000637855 HMGXB3Q12766 1538 aa13.65□□□□□ -0.22
ARHGEF9-236ENST00000637855 MROH2BQ7Z745 1585 aa13.62□□□□□ -0.23
ARHGEF9-236ENST00000637855 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
ARHGEF9-236ENST00000637855 TOP2AP11388 1531 aaKnown RBP13.49□□□□□ -0.25
ARHGEF9-236ENST00000637855 NCBP3Q53F19 620 aaKnown RBP13.48□□□□□ -0.25
ARHGEF9-236ENST00000637855 WIZO95785 1651 aa13.47□□□□□ -0.25
ARHGEF9-236ENST00000637855 BAZ1BQ9UIG0 1483 aaKnown RBP13.46□□□□□ -0.26
ARHGEF9-236ENST00000637855 CHIC1Q5VXU3 224 aa13.35□□□□□ -0.27
ARHGEF9-236ENST00000637855 LAMC3Q9Y6N6 1575 aa13.33□□□□□ -0.28
ARHGEF9-236ENST00000637855 EIF5BO60841 1220 aaKnown RBP13.29□□□□□ -0.28
ARHGEF9-236ENST00000637855 BCL11AQ9H165 835 aa13.29□□□□□ -0.28
ARHGEF9-236ENST00000637855 CCDC88BA6NC98 1476 aa13.26□□□□□ -0.29
ARHGEF9-236ENST00000637855 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
ARHGEF9-236ENST00000637855 CUX2O14529 1486 aa13.19□□□□□ -0.3
ARHGEF9-236ENST00000637855 CADPSQ9ULU8 1353 aa13.19□□□□□ -0.3
ARHGEF9-236ENST00000637855 ARXQ96QS3 562 aa13.16□□□□□ -0.3
ARHGEF9-236ENST00000637855 PRDM2Q13029 1718 aa13.16□□□□□ -0.3
ARHGEF9-236ENST00000637855 CFTRP13569 1480 aa13.14□□□□□ -0.31
ARHGEF9-236ENST00000637855 ERCC6Q03468 1493 aa13.11□□□□□ -0.31
ARHGEF9-236ENST00000637855 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
ARHGEF9-236ENST00000637855 RTN4Q9NQC3 1192 aaKnown RBP13.05□□□□□ -0.32
ARHGEF9-236ENST00000637855 NESP48681 1621 aa13.04□□□□□ -0.32
ARHGEF9-236ENST00000637855 MRC2Q9UBG0 1479 aa13.03□□□□□ -0.32
ARHGEF9-236ENST00000637855 ABCC8Q09428 1581 aa13.02□□□□□ -0.32
ARHGEF9-236ENST00000637855 TRIM41Q8WV44 630 aa13.02□□□□□ -0.32
ARHGEF9-236ENST00000637855 CEP164Q9UPV0 1460 aa13.02□□□□□ -0.33
ARHGEF9-236ENST00000637855 PLPPR3Q6T4P5 718 aa13.02□□□□□ -0.33
ARHGEF9-236ENST00000637855 WDR62O43379 1518 aa13.02□□□□□ -0.33
ARHGEF9-236ENST00000637855 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
ARHGEF9-236ENST00000637855 KIF21AQ7Z4S6 1674 aa13.01□□□□□ -0.33
ARHGEF9-236ENST00000637855 FAM9AQ8IZU1 332 aaPredicted RBP13□□□□□ -0.33
ARHGEF9-236ENST00000637855 FANCD2Q9BXW9 1451 aa13□□□□□ -0.33
ARHGEF9-236ENST00000637855 RANGAP1P46060 587 aaPredicted RBP12.98□□□□□ -0.33
ARHGEF9-236ENST00000637855 EEA1Q15075 1411 aa12.97□□□□□ -0.33
ARHGEF9-236ENST00000637855 WRNQ14191 1432 aaPredicted RBP eCLIP12.94□□□□□ -0.34
ARHGEF9-236ENST00000637855 BIVM-ERCC5R4GMW8 1640 aa12.89□□□□□ -0.35
ARHGEF9-236ENST00000637855 WDR97A6NE52 1622 aa12.88□□□□□ -0.35
ARHGEF9-236ENST00000637855 TOP2BQ02880 1626 aa12.88□□□□□ -0.35
ARHGEF9-236ENST00000637855 DNMBPQ6XZF7 1577 aa12.87□□□□□ -0.35
ARHGEF9-236ENST00000637855 SYNJ1O43426 1573 aa12.84□□□□□ -0.35
ARHGEF9-236ENST00000637855 URB2Q14146 1524 aaKnown RBP12.83□□□□□ -0.35
ARHGEF9-236ENST00000637855 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
ARHGEF9-236ENST00000637855 TOPBP1Q92547 1522 aa12.8□□□□□ -0.36
ARHGEF9-236ENST00000637855 TIMELESSQ9UNS1 1208 aa12.79□□□□□ -0.36
ARHGEF9-236ENST00000637855 PLEKHG5O94827 1062 aa12.77□□□□□ -0.37
ARHGEF9-236ENST00000637855 AMER1Q5JTC6 1135 aaPredicted RBP12.76□□□□□ -0.37
ARHGEF9-236ENST00000637855 CUX1P39880 1505 aa12.75□□□□□ -0.37
ARHGEF9-236ENST00000637855 KIF21BO75037 1637 aa12.73□□□□□ -0.37
ARHGEF9-236ENST00000637855 KLHL34Q8N239 644 aa12.71□□□□□ -0.37
ARHGEF9-236ENST00000637855 SOGA1O94964 1423 aa12.7□□□□□ -0.38
ARHGEF9-236ENST00000637855 TARBP1Q13395 1621 aaKnown RBP12.7□□□□□ -0.38
ARHGEF9-236ENST00000637855 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
ARHGEF9-236ENST00000637855 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
ARHGEF9-236ENST00000637855 HOMEZQ8IX15 550 aa12.67□□□□□ -0.38
ARHGEF9-236ENST00000637855 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
ARHGEF9-236ENST00000637855 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
ARHGEF9-236ENST00000637855 POLA1P09884 1462 aaPredicted RBP12.66□□□□□ -0.38
ARHGEF9-236ENST00000637855 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
ARHGEF9-236ENST00000637855 KIF27Q86VH2 1401 aa12.63□□□□□ -0.39
ARHGEF9-236ENST00000637855 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
ARHGEF9-236ENST00000637855 ABCA10Q8WWZ4 1543 aa12.62□□□□□ -0.39
ARHGEF9-236ENST00000637855 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
ARHGEF9-236ENST00000637855 RUSC2Q8N2Y8 1516 aa12.61□□□□□ -0.39
ARHGEF9-236ENST00000637855 PRXQ9BXM0 1461 aa12.61□□□□□ -0.39
ARHGEF9-236ENST00000637855 PODXL2Q9NZ53 605 aa12.61□□□□□ -0.39
ARHGEF9-236ENST00000637855 EIF4G3O43432 1585 aaKnown RBP12.59□□□□□ -0.39
ARHGEF9-236ENST00000637855 DNAJC5Q9H3Z4 198 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms