RNA–Protein interactions for RNA: ENST00000637106.1

VGLL3-204, Transcript of vestigial like family member 3, humanhuman

TSL 5

Gene VGLL3, Length 1,240 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-204ENST00000637106 NISCHQ9Y2I1 1504 aa20.68■□□□□ 0.9
VGLL3-204ENST00000637106 AEBP2Q6ZN18 517 aaPredicted RBP20.34■□□□□ 0.85
VGLL3-204ENST00000637106 CHIC1Q5VXU3 224 aa19.94■□□□□ 0.78
VGLL3-204ENST00000637106 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
VGLL3-204ENST00000637106 ABCC9O60706 1549 aa18.59■□□□□ 0.57
VGLL3-204ENST00000637106 PELP1Q8IZL8 1130 aaKnown RBP18.26■□□□□ 0.51
VGLL3-204ENST00000637106 MYT1Q01538 1121 aa17.97■□□□□ 0.47
VGLL3-204ENST00000637106 RB1CC1Q8TDY2 1594 aa17.77■□□□□ 0.44
VGLL3-204ENST00000637106 NACADO15069 1562 aa17.65■□□□□ 0.42
VGLL3-204ENST00000637106 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
VGLL3-204ENST00000637106 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
VGLL3-204ENST00000637106 HRCP23327 699 aa17.44■□□□□ 0.38
VGLL3-204ENST00000637106 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
VGLL3-204ENST00000637106 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
VGLL3-204ENST00000637106 DCAF8L2P0C7V8 631 aa17.4■□□□□ 0.38
VGLL3-204ENST00000637106 UNC13AQ9UPW8 1703 aa17.36■□□□□ 0.37
VGLL3-204ENST00000637106 PABPN1Q86U42 306 aaKnown RBP eCLIP17.26■□□□□ 0.35
VGLL3-204ENST00000637106 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
VGLL3-204ENST00000637106 TTBK1Q5TCY1 1321 aaPredicted RBP17.16■□□□□ 0.34
VGLL3-204ENST00000637106 DCAF1Q9Y4B6 1507 aa17.15■□□□□ 0.34
VGLL3-204ENST00000637106 ZCCHC6Q5VYS8 1495 aaKnown RBP17.12■□□□□ 0.33
VGLL3-204ENST00000637106 SHROOM4Q9ULL8 1493 aa17.08■□□□□ 0.32
VGLL3-204ENST00000637106 SCRIBQ14160 1630 aa16.88■□□□□ 0.29
VGLL3-204ENST00000637106 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
VGLL3-204ENST00000637106 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
VGLL3-204ENST00000637106 CECR2Q9BXF3 1484 aa16.79■□□□□ 0.28
VGLL3-204ENST00000637106 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
VGLL3-204ENST00000637106 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
VGLL3-204ENST00000637106 PPARGC1BQ86YN6 1023 aaKnown RBP16.43■□□□□ 0.22
VGLL3-204ENST00000637106 PCGF6Q9BYE7 350 aa16.43■□□□□ 0.22
VGLL3-204ENST00000637106 PLPPR3Q6T4P5 718 aa16.26■□□□□ 0.19
VGLL3-204ENST00000637106 NCAPD3P42695 1498 aa16.26■□□□□ 0.19
VGLL3-204ENST00000637106 ACIN1Q9UKV3 1341 aaKnown RBP16.23■□□□□ 0.19
VGLL3-204ENST00000637106 TRIM26Q12899 539 aaPredicted RBP16.21■□□□□ 0.19
VGLL3-204ENST00000637106 SMARCA2P51531 1590 aa16.17■□□□□ 0.18
VGLL3-204ENST00000637106 ATAD2BQ9ULI0 1458 aa16.17■□□□□ 0.18
VGLL3-204ENST00000637106 DNAJC5Q9H3Z4 198 aa16.17■□□□□ 0.18
VGLL3-204ENST00000637106 CENPBP07199 599 aaPredicted RBP16.16■□□□□ 0.18
VGLL3-204ENST00000637106 HMGXB3Q12766 1538 aa16.15■□□□□ 0.18
VGLL3-204ENST00000637106 SMARCA4P51532 1647 aa16.15■□□□□ 0.18
VGLL3-204ENST00000637106 CUX2O14529 1486 aa16.15■□□□□ 0.18
VGLL3-204ENST00000637106 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
VGLL3-204ENST00000637106 BAZ1AQ9NRL2 1556 aaPredicted RBP16.09■□□□□ 0.17
VGLL3-204ENST00000637106 FOXD1Q16676 465 aa16.07■□□□□ 0.16
VGLL3-204ENST00000637106 PEG3Q9GZU2 1588 aa16.04■□□□□ 0.16
VGLL3-204ENST00000637106 BAZ1BQ9UIG0 1483 aaKnown RBP16.02■□□□□ 0.15
VGLL3-204ENST00000637106 ERICH6Q7L0X2 663 aa15.96■□□□□ 0.15
VGLL3-204ENST00000637106 LAMC3Q9Y6N6 1575 aa15.93■□□□□ 0.14
VGLL3-204ENST00000637106 NESP48681 1621 aa15.93■□□□□ 0.14
VGLL3-204ENST00000637106 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
VGLL3-204ENST00000637106 MROH2BQ7Z745 1585 aa15.88■□□□□ 0.13
VGLL3-204ENST00000637106 NEUROD1Q13562 356 aa15.88■□□□□ 0.13
VGLL3-204ENST00000637106 BCL11AQ9H165 835 aa15.88■□□□□ 0.13
VGLL3-204ENST00000637106 THOC2Q8NI27 1593 aaKnown RBP15.85■□□□□ 0.13
VGLL3-204ENST00000637106 CLSPNQ9HAW4 1339 aa15.84■□□□□ 0.13
VGLL3-204ENST00000637106 PDS5BQ9NTI5 1447 aa15.83■□□□□ 0.12
VGLL3-204ENST00000637106 KIF21AQ7Z4S6 1674 aa15.79■□□□□ 0.12
VGLL3-204ENST00000637106 CADPSQ9ULU8 1353 aa15.75■□□□□ 0.11
VGLL3-204ENST00000637106 SUPT5HO00267 1087 aaKnown RBP15.74■□□□□ 0.11
VGLL3-204ENST00000637106 WIZO95785 1651 aa15.7■□□□□ 0.1
VGLL3-204ENST00000637106 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
VGLL3-204ENST00000637106 MRC2Q9UBG0 1479 aa15.66■□□□□ 0.1
VGLL3-204ENST00000637106 PRKCSHP14314 528 aaPredicted RBP15.64■□□□□ 0.09
VGLL3-204ENST00000637106 WDR62O43379 1518 aa15.63■□□□□ 0.09
VGLL3-204ENST00000637106 CEP164Q9UPV0 1460 aa15.59■□□□□ 0.09
VGLL3-204ENST00000637106 APLP2Q06481 763 aa15.59■□□□□ 0.09
VGLL3-204ENST00000637106 FAM9AQ8IZU1 332 aaPredicted RBP15.57■□□□□ 0.08
VGLL3-204ENST00000637106 DIEXFQ68CQ4 756 aaKnown RBP15.56■□□□□ 0.08
VGLL3-204ENST00000637106 CFTRP13569 1480 aa15.56■□□□□ 0.08
VGLL3-204ENST00000637106 FANCD2Q9BXW9 1451 aa15.55■□□□□ 0.08
VGLL3-204ENST00000637106 RSF1Q96T23 1441 aaPredicted RBP15.55■□□□□ 0.08
VGLL3-204ENST00000637106 TOP2AP11388 1531 aaKnown RBP15.54■□□□□ 0.08
VGLL3-204ENST00000637106 PRDM2Q13029 1718 aa15.48■□□□□ 0.07
VGLL3-204ENST00000637106 ADRA2BP18089 450 aa15.43■□□□□ 0.06
VGLL3-204ENST00000637106 PPP6R1Q9UPN7 881 aa15.42■□□□□ 0.06
VGLL3-204ENST00000637106 URB2Q14146 1524 aaKnown RBP15.4■□□□□ 0.06
VGLL3-204ENST00000637106 TRIM41Q8WV44 630 aa15.39■□□□□ 0.05
VGLL3-204ENST00000637106 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
VGLL3-204ENST00000637106 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
VGLL3-204ENST00000637106 LOC105371045A0A1W2PR82 267 aa15.33■□□□□ 0.04
VGLL3-204ENST00000637106 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
VGLL3-204ENST00000637106 ABCC8Q09428 1581 aa15.31■□□□□ 0.04
VGLL3-204ENST00000637106 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
VGLL3-204ENST00000637106 ZNF316A6NFI3 1004 aaPredicted RBP15.27■□□□□ 0.04
VGLL3-204ENST00000637106 TOPBP1Q92547 1522 aa15.25■□□□□ 0.03
VGLL3-204ENST00000637106 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
VGLL3-204ENST00000637106 CCER1Q8TC90 406 aaPredicted RBP15.22■□□□□ 0.03
VGLL3-204ENST00000637106 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
VGLL3-204ENST00000637106 PIAS4Q8N2W9 510 aaPredicted RBP15.21■□□□□ 0.03
VGLL3-204ENST00000637106 TSHZ2Q9NRE2 1034 aa15.2■□□□□ 0.02
VGLL3-204ENST00000637106 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
VGLL3-204ENST00000637106 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
VGLL3-204ENST00000637106 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
VGLL3-204ENST00000637106 RIMBP3BA6NNM3 1639 aa15.15■□□□□ 0.02
VGLL3-204ENST00000637106 RIMBP3Q9UFD9 1639 aa15.15■□□□□ 0.02
VGLL3-204ENST00000637106 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
VGLL3-204ENST00000637106 SUPT16HQ9Y5B9 1047 aaKnown RBP15.12■□□□□ 0.01
VGLL3-204ENST00000637106 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
VGLL3-204ENST00000637106 POLA1P09884 1462 aaPredicted RBP15.08■□□□□ 0.01
VGLL3-204ENST00000637106 CHD1O14646 1710 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms