RNA–Protein interactions for RNA: ENST00000636898.1

CHRNA7-221, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,057 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-221ENST00000636898 NISCHQ9Y2I1 1504 aa33.63■■■□□ 2.97
CHRNA7-221ENST00000636898 CCDC180Q9P1Z9 1646 aa28.76■■■□□ 2.2
CHRNA7-221ENST00000636898 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
CHRNA7-221ENST00000636898 SHROOM4Q9ULL8 1493 aa28.29■■■□□ 2.12
CHRNA7-221ENST00000636898 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
CHRNA7-221ENST00000636898 SUPT5HO00267 1087 aaKnown RBP27.75■■■□□ 2.03
CHRNA7-221ENST00000636898 DCAF8L2P0C7V8 631 aa27.5■■□□□ 1.99
CHRNA7-221ENST00000636898 CHIC1Q5VXU3 224 aa27.12■■□□□ 1.93
CHRNA7-221ENST00000636898 MYO15BQ96JP2 1530 aa27.02■■□□□ 1.92
CHRNA7-221ENST00000636898 ABCC9O60706 1549 aa26.86■■□□□ 1.89
CHRNA7-221ENST00000636898 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
CHRNA7-221ENST00000636898 NACADO15069 1562 aa26.55■■□□□ 1.84
CHRNA7-221ENST00000636898 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
CHRNA7-221ENST00000636898 RB1CC1Q8TDY2 1594 aa26.33■■□□□ 1.81
CHRNA7-221ENST00000636898 HRCP23327 699 aa26.24■■□□□ 1.79
CHRNA7-221ENST00000636898 LOC105371045A0A1W2PR82 267 aa26.16■■□□□ 1.78
CHRNA7-221ENST00000636898 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
CHRNA7-221ENST00000636898 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
CHRNA7-221ENST00000636898 MROH2BQ7Z745 1585 aa26.05■■□□□ 1.76
CHRNA7-221ENST00000636898 TRIM41Q8WV44 630 aa25.98■■□□□ 1.75
CHRNA7-221ENST00000636898 WIZO95785 1651 aa25.91■■□□□ 1.74
CHRNA7-221ENST00000636898 BAZ1AQ9NRL2 1556 aaPredicted RBP25.88■■□□□ 1.73
CHRNA7-221ENST00000636898 TRIM26Q12899 539 aaPredicted RBP25.81■■□□□ 1.72
CHRNA7-221ENST00000636898 EIF4G1Q04637 1599 aaKnown RBP25.68■■□□□ 1.7
CHRNA7-221ENST00000636898 UNC13AQ9UPW8 1703 aa25.65■■□□□ 1.7
CHRNA7-221ENST00000636898 SMARCA4P51532 1647 aa25.62■■□□□ 1.69
CHRNA7-221ENST00000636898 TOP2AP11388 1531 aaKnown RBP25.62■■□□□ 1.69
CHRNA7-221ENST00000636898 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
CHRNA7-221ENST00000636898 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
CHRNA7-221ENST00000636898 SMARCA2P51531 1590 aa25.43■■□□□ 1.66
CHRNA7-221ENST00000636898 CCDC88BA6NC98 1476 aa25.42■■□□□ 1.66
CHRNA7-221ENST00000636898 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
CHRNA7-221ENST00000636898 BICRAQ9NZM4 1560 aa25.31■■□□□ 1.64
CHRNA7-221ENST00000636898 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
CHRNA7-221ENST00000636898 PEG3Q9GZU2 1588 aa25.25■■□□□ 1.63
CHRNA7-221ENST00000636898 EHMT2Q96KQ7 1210 aa25.21■■□□□ 1.63
CHRNA7-221ENST00000636898 EEA1Q15075 1411 aa25.12■■□□□ 1.61
CHRNA7-221ENST00000636898 PABPN1Q86U42 306 aaKnown RBP eCLIP25.08■■□□□ 1.6
CHRNA7-221ENST00000636898 WRNQ14191 1432 aaPredicted RBP eCLIP25.04■■□□□ 1.6
CHRNA7-221ENST00000636898 SOGA1O94964 1423 aa25.01■■□□□ 1.6
CHRNA7-221ENST00000636898 TNIKQ9UKE5 1360 aa24.98■■□□□ 1.59
CHRNA7-221ENST00000636898 CEP162Q5TB80 1403 aa24.95■■□□□ 1.58
CHRNA7-221ENST00000636898 ATAD2BQ9ULI0 1458 aa24.94■■□□□ 1.58
CHRNA7-221ENST00000636898 CSRNP3Q8WYN3 585 aa24.92■■□□□ 1.58
CHRNA7-221ENST00000636898 BAZ1BQ9UIG0 1483 aaKnown RBP24.86■■□□□ 1.57
CHRNA7-221ENST00000636898 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
CHRNA7-221ENST00000636898 GOLGA3Q08378 1498 aa24.84■■□□□ 1.57
CHRNA7-221ENST00000636898 SYNJ1O43426 1573 aa24.8■■□□□ 1.56
CHRNA7-221ENST00000636898 KIF21BO75037 1637 aa24.75■■□□□ 1.55
CHRNA7-221ENST00000636898 CEP164Q9UPV0 1460 aa24.72■■□□□ 1.55
CHRNA7-221ENST00000636898 UBTFP17480 764 aaKnown RBP24.71■■□□□ 1.55
CHRNA7-221ENST00000636898 CCER1Q8TC90 406 aaPredicted RBP24.62■■□□□ 1.53
CHRNA7-221ENST00000636898 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.61■■□□□ 1.53
CHRNA7-221ENST00000636898 TOP2BQ02880 1626 aa24.59■■□□□ 1.53
CHRNA7-221ENST00000636898 HMGXB3Q12766 1538 aa24.57■■□□□ 1.52
CHRNA7-221ENST00000636898 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
CHRNA7-221ENST00000636898 NCAPD3P42695 1498 aa24.52■■□□□ 1.52
CHRNA7-221ENST00000636898 CLIP1P30622 1438 aa24.5■■□□□ 1.51
CHRNA7-221ENST00000636898 RAPGEF2Q9Y4G8 1499 aa24.44■■□□□ 1.5
CHRNA7-221ENST00000636898 VPS8Q8N3P4 1428 aa24.44■■□□□ 1.5
CHRNA7-221ENST00000636898 TTBK1Q5TCY1 1321 aaPredicted RBP24.43■■□□□ 1.5
CHRNA7-221ENST00000636898 ERICH3Q5RHP9 1530 aa24.38■■□□□ 1.49
CHRNA7-221ENST00000636898 PRXQ9BXM0 1461 aa24.32■■□□□ 1.48
CHRNA7-221ENST00000636898 CFTRP13569 1480 aa24.3■■□□□ 1.48
CHRNA7-221ENST00000636898 CUX1P39880 1505 aa24.28■■□□□ 1.48
CHRNA7-221ENST00000636898 APLP2Q06481 763 aa24.23■■□□□ 1.47
CHRNA7-221ENST00000636898 PRDM2Q13029 1718 aa24.21■■□□□ 1.47
CHRNA7-221ENST00000636898 KIF27Q86VH2 1401 aa24.2■■□□□ 1.46
CHRNA7-221ENST00000636898 DIEXFQ68CQ4 756 aaKnown RBP24.13■■□□□ 1.45
CHRNA7-221ENST00000636898 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
CHRNA7-221ENST00000636898 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
CHRNA7-221ENST00000636898 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
CHRNA7-221ENST00000636898 ZNF316A6NFI3 1004 aaPredicted RBP24.02■■□□□ 1.44
CHRNA7-221ENST00000636898 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
CHRNA7-221ENST00000636898 CADPSQ9ULU8 1353 aa23.99■■□□□ 1.43
CHRNA7-221ENST00000636898 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
CHRNA7-221ENST00000636898 ARHGAP35Q9NRY4 1499 aa23.93■■□□□ 1.42
CHRNA7-221ENST00000636898 CLSPNQ9HAW4 1339 aa23.91■■□□□ 1.42
CHRNA7-221ENST00000636898 CUX2O14529 1486 aa23.9■■□□□ 1.42
CHRNA7-221ENST00000636898 RRBP1Q9P2E9 1410 aaKnown RBP23.89■■□□□ 1.42
CHRNA7-221ENST00000636898 IGF1RP08069 1367 aa23.89■■□□□ 1.42
CHRNA7-221ENST00000636898 KANK4Q5T7N3 995 aaPredicted RBP23.86■■□□□ 1.41
CHRNA7-221ENST00000636898 CENPBP07199 599 aaPredicted RBP23.85■■□□□ 1.41
CHRNA7-221ENST00000636898 FGD5Q6ZNL6 1462 aa23.84■■□□□ 1.41
CHRNA7-221ENST00000636898 CC2D2AQ9P2K1 1620 aa23.83■■□□□ 1.4
CHRNA7-221ENST00000636898 NEUROD1Q13562 356 aa23.82■■□□□ 1.4
CHRNA7-221ENST00000636898 MAP3K1Q13233 1512 aa23.8■■□□□ 1.4
CHRNA7-221ENST00000636898 CARMIL1Q5VZK9 1371 aa23.78■■□□□ 1.4
CHRNA7-221ENST00000636898 DHX57Q6P158 1386 aaKnown RBP23.78■■□□□ 1.4
CHRNA7-221ENST00000636898 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
CHRNA7-221ENST00000636898 CCNB3Q8WWL7 1395 aa23.74■■□□□ 1.39
CHRNA7-221ENST00000636898 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
CHRNA7-221ENST00000636898 TIAM1Q13009 1591 aa23.71■■□□□ 1.39
CHRNA7-221ENST00000636898 DNMBPQ6XZF7 1577 aa23.7■■□□□ 1.38
CHRNA7-221ENST00000636898 ABCA10Q8WWZ4 1543 aa23.65■■□□□ 1.38
CHRNA7-221ENST00000636898 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.38
CHRNA7-221ENST00000636898 TOPBP1Q92547 1522 aa23.6■■□□□ 1.37
CHRNA7-221ENST00000636898 LRRC9Q6ZRR7 1453 aa23.6■■□□□ 1.37
CHRNA7-221ENST00000636898 CFAP43Q8NDM7 1665 aa23.58■■□□□ 1.37
CHRNA7-221ENST00000636898 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms