RNA–Protein interactions for RNA: ENST00000636762.1

CACNB4-232, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 5

Gene CACNB4, Length 3,191 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-232ENST00000636762 NISCHQ9Y2I1 1504 aa17.13■□□□□ 0.33
CACNB4-232ENST00000636762 SHROOM4Q9ULL8 1493 aa15.08■□□□□ 0.01
CACNB4-232ENST00000636762 DCAF8L2P0C7V8 631 aa15.05■□□□□ -0
CACNB4-232ENST00000636762 SUPT5HO00267 1087 aaKnown RBP14.73□□□□□ -0.05
CACNB4-232ENST00000636762 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
CACNB4-232ENST00000636762 CCDC180Q9P1Z9 1646 aa14.35□□□□□ -0.11
CACNB4-232ENST00000636762 ABCC9O60706 1549 aa14.09□□□□□ -0.15
CACNB4-232ENST00000636762 CHIC1Q5VXU3 224 aa13.93□□□□□ -0.18
CACNB4-232ENST00000636762 SCRIBQ14160 1630 aa13.88□□□□□ -0.19
CACNB4-232ENST00000636762 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.19
CACNB4-232ENST00000636762 DCAF1Q9Y4B6 1507 aa13.77□□□□□ -0.21
CACNB4-232ENST00000636762 MYO15BQ96JP2 1530 aa13.77□□□□□ -0.21
CACNB4-232ENST00000636762 LOC105371045A0A1W2PR82 267 aa13.75□□□□□ -0.21
CACNB4-232ENST00000636762 FAM9AQ8IZU1 332 aaPredicted RBP13.72□□□□□ -0.21
CACNB4-232ENST00000636762 PABPN1Q86U42 306 aaKnown RBP eCLIP13.65□□□□□ -0.23
CACNB4-232ENST00000636762 RSF1Q96T23 1441 aaPredicted RBP13.6□□□□□ -0.23
CACNB4-232ENST00000636762 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
CACNB4-232ENST00000636762 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
CACNB4-232ENST00000636762 PCGF6Q9BYE7 350 aa13.54□□□□□ -0.24
CACNB4-232ENST00000636762 NACADO15069 1562 aa13.47□□□□□ -0.25
CACNB4-232ENST00000636762 MROH2BQ7Z745 1585 aa13.43□□□□□ -0.26
CACNB4-232ENST00000636762 RB1CC1Q8TDY2 1594 aa13.42□□□□□ -0.26
CACNB4-232ENST00000636762 PPARGC1BQ86YN6 1023 aaKnown RBP13.36□□□□□ -0.27
CACNB4-232ENST00000636762 WIZO95785 1651 aa13.31□□□□□ -0.28
CACNB4-232ENST00000636762 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
CACNB4-232ENST00000636762 RANGAP1P46060 587 aaPredicted RBP13.14□□□□□ -0.31
CACNB4-232ENST00000636762 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
CACNB4-232ENST00000636762 HRCP23327 699 aa13.13□□□□□ -0.31
CACNB4-232ENST00000636762 ABCC8Q09428 1581 aa13.08□□□□□ -0.32
CACNB4-232ENST00000636762 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
CACNB4-232ENST00000636762 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
CACNB4-232ENST00000636762 UNC13AQ9UPW8 1703 aa13.05□□□□□ -0.32
CACNB4-232ENST00000636762 SMARCA4P51532 1647 aa13.04□□□□□ -0.32
CACNB4-232ENST00000636762 UBTFP17480 764 aaKnown RBP13.04□□□□□ -0.32
CACNB4-232ENST00000636762 BICRAQ9NZM4 1560 aa13.01□□□□□ -0.33
CACNB4-232ENST00000636762 SOGA1O94964 1423 aa12.97□□□□□ -0.33
CACNB4-232ENST00000636762 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
CACNB4-232ENST00000636762 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
CACNB4-232ENST00000636762 RUSC2Q8N2Y8 1516 aa12.92□□□□□ -0.34
CACNB4-232ENST00000636762 CSRNP3Q8WYN3 585 aa12.89□□□□□ -0.35
CACNB4-232ENST00000636762 BAZ1BQ9UIG0 1483 aaKnown RBP12.87□□□□□ -0.35
CACNB4-232ENST00000636762 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
CACNB4-232ENST00000636762 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.85□□□□□ -0.35
CACNB4-232ENST00000636762 WRNQ14191 1432 aaPredicted RBP eCLIP12.82□□□□□ -0.36
CACNB4-232ENST00000636762 EIF4G1Q04637 1599 aaKnown RBP12.78□□□□□ -0.36
CACNB4-232ENST00000636762 CCER1Q8TC90 406 aaPredicted RBP12.74□□□□□ -0.37
CACNB4-232ENST00000636762 CEP162Q5TB80 1403 aa12.74□□□□□ -0.37
CACNB4-232ENST00000636762 HNRNPUL2Q1KMD3 747 aaKnown RBP12.7□□□□□ -0.38
CACNB4-232ENST00000636762 SYNJ1O43426 1573 aa12.68□□□□□ -0.38
CACNB4-232ENST00000636762 APLP2Q06481 763 aa12.64□□□□□ -0.39
CACNB4-232ENST00000636762 DNAJC5BQ9UF47 199 aa12.64□□□□□ -0.39
CACNB4-232ENST00000636762 TNIKQ9UKE5 1360 aa12.63□□□□□ -0.39
CACNB4-232ENST00000636762 PEG3Q9GZU2 1588 aa12.61□□□□□ -0.39
CACNB4-232ENST00000636762 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
CACNB4-232ENST00000636762 GOLGA3Q08378 1498 aa12.6□□□□□ -0.39
CACNB4-232ENST00000636762 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
CACNB4-232ENST00000636762 P3H3Q8IVL6 736 aa12.57□□□□□ -0.4
CACNB4-232ENST00000636762 CLIP1P30622 1438 aa12.57□□□□□ -0.4
CACNB4-232ENST00000636762 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
CACNB4-232ENST00000636762 ZEB1P37275 1124 aaPredicted RBP12.55□□□□□ -0.4
CACNB4-232ENST00000636762 ITGAEP38570 1179 aa12.55□□□□□ -0.4
CACNB4-232ENST00000636762 EEA1Q15075 1411 aa12.54□□□□□ -0.4
CACNB4-232ENST00000636762 AEBP2Q6ZN18 517 aaPredicted RBP12.53□□□□□ -0.4
CACNB4-232ENST00000636762 CEP164Q9UPV0 1460 aa12.52□□□□□ -0.4
CACNB4-232ENST00000636762 CUX1P39880 1505 aa12.47□□□□□ -0.41
CACNB4-232ENST00000636762 KANK4Q5T7N3 995 aaPredicted RBP12.46□□□□□ -0.41
CACNB4-232ENST00000636762 NESP48681 1621 aa12.45□□□□□ -0.42
CACNB4-232ENST00000636762 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
CACNB4-232ENST00000636762 CUX2O14529 1486 aa12.44□□□□□ -0.42
CACNB4-232ENST00000636762 CFTRP13569 1480 aa12.44□□□□□ -0.42
CACNB4-232ENST00000636762 CC2D2AQ9P2K1 1620 aa12.44□□□□□ -0.42
CACNB4-232ENST00000636762 KIF27Q86VH2 1401 aa12.42□□□□□ -0.42
CACNB4-232ENST00000636762 HMGXB3Q12766 1538 aa12.42□□□□□ -0.42
CACNB4-232ENST00000636762 TOP2BQ02880 1626 aa12.41□□□□□ -0.42
CACNB4-232ENST00000636762 VPS8Q8N3P4 1428 aa12.38□□□□□ -0.43
CACNB4-232ENST00000636762 RAD54L2Q9Y4B4 1467 aa12.37□□□□□ -0.43
CACNB4-232ENST00000636762 ARID3CA6NKF2 412 aa12.36□□□□□ -0.43
CACNB4-232ENST00000636762 IGF1RP08069 1367 aa12.34□□□□□ -0.43
CACNB4-232ENST00000636762 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
CACNB4-232ENST00000636762 KIF21BO75037 1637 aa12.34□□□□□ -0.43
CACNB4-232ENST00000636762 FANCD2Q9BXW9 1451 aa12.34□□□□□ -0.43
CACNB4-232ENST00000636762 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
CACNB4-232ENST00000636762 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
CACNB4-232ENST00000636762 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
CACNB4-232ENST00000636762 ARAP1Q96P48 1450 aa12.32□□□□□ -0.44
CACNB4-232ENST00000636762 FAM50AQ14320 339 aaKnown RBP12.3□□□□□ -0.44
CACNB4-232ENST00000636762 DIEXFQ68CQ4 756 aaKnown RBP12.29□□□□□ -0.44
CACNB4-232ENST00000636762 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.45
CACNB4-232ENST00000636762 YTHDC1Q96MU7 727 aaKnown RBP12.27□□□□□ -0.45
CACNB4-232ENST00000636762 ARHGAP35Q9NRY4 1499 aa12.23□□□□□ -0.45
CACNB4-232ENST00000636762 FHOD3Q2V2M9 1422 aa12.21□□□□□ -0.46
CACNB4-232ENST00000636762 POLA1P09884 1462 aaPredicted RBP12.2□□□□□ -0.46
CACNB4-232ENST00000636762 FBLN2P98095 1184 aa12.19□□□□□ -0.46
CACNB4-232ENST00000636762 TOPBP1Q92547 1522 aa12.18□□□□□ -0.46
CACNB4-232ENST00000636762 ERICH3Q5RHP9 1530 aa12.17□□□□□ -0.46
CACNB4-232ENST00000636762 ZNF316A6NFI3 1004 aaPredicted RBP12.17□□□□□ -0.46
CACNB4-232ENST00000636762 NEUROD1Q13562 356 aa12.17□□□□□ -0.46
CACNB4-232ENST00000636762 URB2Q14146 1524 aaKnown RBP12.14□□□□□ -0.47
CACNB4-232ENST00000636762 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
CACNB4-232ENST00000636762 AQRO60306 1485 aaKnown RBP eCLIP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms