RNA–Protein interactions for RNA: ENST00000636254.1

ARID1B-215, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 3,848 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-215ENST00000636254 NISCHQ9Y2I1 1504 aa16.23■□□□□ 0.19
ARID1B-215ENST00000636254 DCAF8L2P0C7V8 631 aa13.98□□□□□ -0.17
ARID1B-215ENST00000636254 CCDC180Q9P1Z9 1646 aa13.97□□□□□ -0.17
ARID1B-215ENST00000636254 ZCCHC6Q5VYS8 1495 aaKnown RBP13.68□□□□□ -0.22
ARID1B-215ENST00000636254 SHROOM4Q9ULL8 1493 aa13.67□□□□□ -0.22
ARID1B-215ENST00000636254 SUPT5HO00267 1087 aaKnown RBP13.66□□□□□ -0.22
ARID1B-215ENST00000636254 SLC24A1O60721 1099 aa13.62□□□□□ -0.23
ARID1B-215ENST00000636254 MYT1Q01538 1121 aa13.35□□□□□ -0.27
ARID1B-215ENST00000636254 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
ARID1B-215ENST00000636254 DCAF1Q9Y4B6 1507 aa13.3□□□□□ -0.28
ARID1B-215ENST00000636254 ABCC9O60706 1549 aa13.22□□□□□ -0.29
ARID1B-215ENST00000636254 EHMT2Q96KQ7 1210 aa13.12□□□□□ -0.31
ARID1B-215ENST00000636254 SCRIBQ14160 1630 aa13.05□□□□□ -0.32
ARID1B-215ENST00000636254 MYO15BQ96JP2 1530 aa13.04□□□□□ -0.32
ARID1B-215ENST00000636254 PRKCSHP14314 528 aaPredicted RBP13.02□□□□□ -0.33
ARID1B-215ENST00000636254 TTBK1Q5TCY1 1321 aaPredicted RBP12.99□□□□□ -0.33
ARID1B-215ENST00000636254 NACADO15069 1562 aa12.95□□□□□ -0.34
ARID1B-215ENST00000636254 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
ARID1B-215ENST00000636254 FAM9AQ8IZU1 332 aaPredicted RBP12.83□□□□□ -0.36
ARID1B-215ENST00000636254 RB1CC1Q8TDY2 1594 aa12.81□□□□□ -0.36
ARID1B-215ENST00000636254 UNC13AQ9UPW8 1703 aa12.79□□□□□ -0.36
ARID1B-215ENST00000636254 ERICH6Q7L0X2 663 aa12.76□□□□□ -0.37
ARID1B-215ENST00000636254 CECR2Q9BXF3 1484 aa12.73□□□□□ -0.37
ARID1B-215ENST00000636254 RSF1Q96T23 1441 aaPredicted RBP12.71□□□□□ -0.38
ARID1B-215ENST00000636254 APLP2Q06481 763 aa12.67□□□□□ -0.38
ARID1B-215ENST00000636254 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
ARID1B-215ENST00000636254 DAXXQ9UER7 740 aaPredicted RBP12.65□□□□□ -0.38
ARID1B-215ENST00000636254 MROH2BQ7Z745 1585 aa12.64□□□□□ -0.39
ARID1B-215ENST00000636254 CHIC1Q5VXU3 224 aa12.62□□□□□ -0.39
ARID1B-215ENST00000636254 BICRAQ9NZM4 1560 aa12.61□□□□□ -0.39
ARID1B-215ENST00000636254 PABPN1Q86U42 306 aaKnown RBP eCLIP12.59□□□□□ -0.39
ARID1B-215ENST00000636254 WIZO95785 1651 aa12.57□□□□□ -0.4
ARID1B-215ENST00000636254 PPARGC1BQ86YN6 1023 aaKnown RBP12.55□□□□□ -0.4
ARID1B-215ENST00000636254 TRIM41Q8WV44 630 aa12.47□□□□□ -0.41
ARID1B-215ENST00000636254 SMARCA4P51532 1647 aa12.46□□□□□ -0.42
ARID1B-215ENST00000636254 BAZ1AQ9NRL2 1556 aaPredicted RBP12.46□□□□□ -0.42
ARID1B-215ENST00000636254 HRCP23327 699 aa12.4□□□□□ -0.42
ARID1B-215ENST00000636254 RANGAP1P46060 587 aaPredicted RBP12.35□□□□□ -0.43
ARID1B-215ENST00000636254 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
ARID1B-215ENST00000636254 EIF4G1Q04637 1599 aaKnown RBP12.31□□□□□ -0.44
ARID1B-215ENST00000636254 SMARCA2P51531 1590 aa12.27□□□□□ -0.44
ARID1B-215ENST00000636254 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
ARID1B-215ENST00000636254 PEG3Q9GZU2 1588 aa12.25□□□□□ -0.45
ARID1B-215ENST00000636254 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
ARID1B-215ENST00000636254 ATAD2BQ9ULI0 1458 aa12.19□□□□□ -0.46
ARID1B-215ENST00000636254 BCL11AQ9H165 835 aa12.19□□□□□ -0.46
ARID1B-215ENST00000636254 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
ARID1B-215ENST00000636254 ABCC8Q09428 1581 aa12.15□□□□□ -0.46
ARID1B-215ENST00000636254 EIF5BO60841 1220 aaKnown RBP12.15□□□□□ -0.46
ARID1B-215ENST00000636254 UBTFP17480 764 aaKnown RBP12.13□□□□□ -0.47
ARID1B-215ENST00000636254 BAZ1BQ9UIG0 1483 aaKnown RBP12.1□□□□□ -0.47
ARID1B-215ENST00000636254 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.07□□□□□ -0.48
ARID1B-215ENST00000636254 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
ARID1B-215ENST00000636254 YTHDC1Q96MU7 727 aaKnown RBP12□□□□□ -0.49
ARID1B-215ENST00000636254 NCAPD3P42695 1498 aa12□□□□□ -0.49
ARID1B-215ENST00000636254 ZEB1P37275 1124 aaPredicted RBP11.99□□□□□ -0.49
ARID1B-215ENST00000636254 HMGXB3Q12766 1538 aa11.99□□□□□ -0.49
ARID1B-215ENST00000636254 SYNJ1O43426 1573 aa11.96□□□□□ -0.5
ARID1B-215ENST00000636254 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
ARID1B-215ENST00000636254 CC2D2AQ9P2K1 1620 aa11.94□□□□□ -0.5
ARID1B-215ENST00000636254 RUSC2Q8N2Y8 1516 aa11.94□□□□□ -0.5
ARID1B-215ENST00000636254 SOGA1O94964 1423 aa11.93□□□□□ -0.5
ARID1B-215ENST00000636254 HNRNPUL2Q1KMD3 747 aaKnown RBP11.93□□□□□ -0.5
ARID1B-215ENST00000636254 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
ARID1B-215ENST00000636254 RTN4Q9NQC3 1192 aaKnown RBP11.91□□□□□ -0.5
ARID1B-215ENST00000636254 WRNQ14191 1432 aaPredicted RBP eCLIP11.89□□□□□ -0.51
ARID1B-215ENST00000636254 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
ARID1B-215ENST00000636254 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
ARID1B-215ENST00000636254 ITGAEP38570 1179 aa11.83□□□□□ -0.52
ARID1B-215ENST00000636254 CFTRP13569 1480 aa11.82□□□□□ -0.52
ARID1B-215ENST00000636254 TOP2BQ02880 1626 aa11.79□□□□□ -0.52
ARID1B-215ENST00000636254 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
ARID1B-215ENST00000636254 CUX1P39880 1505 aa11.79□□□□□ -0.52
ARID1B-215ENST00000636254 BIVM-ERCC5R4GMW8 1640 aa11.78□□□□□ -0.52
ARID1B-215ENST00000636254 CENPBP07199 599 aaPredicted RBP11.77□□□□□ -0.53
ARID1B-215ENST00000636254 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
ARID1B-215ENST00000636254 NESP48681 1621 aa11.73□□□□□ -0.53
ARID1B-215ENST00000636254 DIEXFQ68CQ4 756 aaKnown RBP11.73□□□□□ -0.53
ARID1B-215ENST00000636254 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.53
ARID1B-215ENST00000636254 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.54
ARID1B-215ENST00000636254 KLHL34Q8N239 644 aa11.69□□□□□ -0.54
ARID1B-215ENST00000636254 TIMELESSQ9UNS1 1208 aa11.68□□□□□ -0.54
ARID1B-215ENST00000636254 EEA1Q15075 1411 aa11.66□□□□□ -0.54
ARID1B-215ENST00000636254 RAPGEF2Q9Y4G8 1499 aa11.65□□□□□ -0.54
ARID1B-215ENST00000636254 CEP162Q5TB80 1403 aa11.65□□□□□ -0.54
ARID1B-215ENST00000636254 KIF21BO75037 1637 aa11.64□□□□□ -0.55
ARID1B-215ENST00000636254 GOLGA3Q08378 1498 aa11.62□□□□□ -0.55
ARID1B-215ENST00000636254 FANCD2Q9BXW9 1451 aa11.62□□□□□ -0.55
ARID1B-215ENST00000636254 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
ARID1B-215ENST00000636254 ARXQ96QS3 562 aa11.61□□□□□ -0.55
ARID1B-215ENST00000636254 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
ARID1B-215ENST00000636254 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
ARID1B-215ENST00000636254 FGD5Q6ZNL6 1462 aa11.59□□□□□ -0.55
ARID1B-215ENST00000636254 CEP164Q9UPV0 1460 aa11.59□□□□□ -0.55
ARID1B-215ENST00000636254 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
ARID1B-215ENST00000636254 KIF21AQ7Z4S6 1674 aa11.55□□□□□ -0.56
ARID1B-215ENST00000636254 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
ARID1B-215ENST00000636254 URB2Q14146 1524 aaKnown RBP11.54□□□□□ -0.56
ARID1B-215ENST00000636254 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
ARID1B-215ENST00000636254 TOPBP1Q92547 1522 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms