RNA–Protein interactions for RNA: ENST00000636239.1

CPT2-205, Transcript of carnitine palmitoyltransferase 2, humanhuman

TSL 5

Gene CPT2, Length 2,579 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT2-205ENST00000636239 NISCHQ9Y2I1 1504 aa39.27■■■■□ 3.88
CPT2-205ENST00000636239 SHROOM4Q9ULL8 1493 aa33.82■■■■□ 3
CPT2-205ENST00000636239 CCDC180Q9P1Z9 1646 aa33.43■■■□□ 2.94
CPT2-205ENST00000636239 ZCCHC6Q5VYS8 1495 aaKnown RBP33.21■■■□□ 2.91
CPT2-205ENST00000636239 SUPT5HO00267 1087 aaKnown RBP33.16■■■□□ 2.9
CPT2-205ENST00000636239 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
CPT2-205ENST00000636239 CHIC1Q5VXU3 224 aa32.17■■■□□ 2.74
CPT2-205ENST00000636239 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
CPT2-205ENST00000636239 DCAF1Q9Y4B6 1507 aa32.07■■■□□ 2.72
CPT2-205ENST00000636239 ABCC9O60706 1549 aa31.66■■■□□ 2.66
CPT2-205ENST00000636239 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
CPT2-205ENST00000636239 LOC105371045A0A1W2PR82 267 aa31.35■■■□□ 2.61
CPT2-205ENST00000636239 PCGF6Q9BYE7 350 aa31.32■■■□□ 2.6
CPT2-205ENST00000636239 HRCP23327 699 aa31.25■■■□□ 2.59
CPT2-205ENST00000636239 RSF1Q96T23 1441 aaPredicted RBP31.16■■■□□ 2.58
CPT2-205ENST00000636239 NACADO15069 1562 aa31.1■■■□□ 2.57
CPT2-205ENST00000636239 RB1CC1Q8TDY2 1594 aa30.89■■■□□ 2.54
CPT2-205ENST00000636239 PPARGC1BQ86YN6 1023 aaKnown RBP30.8■■■□□ 2.52
CPT2-205ENST00000636239 TRIM41Q8WV44 630 aa30.78■■■□□ 2.52
CPT2-205ENST00000636239 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.51
CPT2-205ENST00000636239 FAM9AQ8IZU1 332 aaPredicted RBP30.7■■■□□ 2.5
CPT2-205ENST00000636239 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
CPT2-205ENST00000636239 TRIM26Q12899 539 aaPredicted RBP30.57■■■□□ 2.48
CPT2-205ENST00000636239 EHMT2Q96KQ7 1210 aa30.56■■■□□ 2.48
CPT2-205ENST00000636239 WIZO95785 1651 aa30.48■■■□□ 2.47
CPT2-205ENST00000636239 UNC13AQ9UPW8 1703 aa30.27■■■□□ 2.44
CPT2-205ENST00000636239 PABPN1Q86U42 306 aaKnown RBP eCLIP30.21■■■□□ 2.43
CPT2-205ENST00000636239 BAZ1AQ9NRL2 1556 aaPredicted RBP30.17■■■□□ 2.42
CPT2-205ENST00000636239 EIF4G1Q04637 1599 aaKnown RBP29.99■■■□□ 2.39
CPT2-205ENST00000636239 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
CPT2-205ENST00000636239 SMARCA4P51532 1647 aa29.9■■■□□ 2.38
CPT2-205ENST00000636239 TOP2AP11388 1531 aaKnown RBP29.88■■■□□ 2.37
CPT2-205ENST00000636239 ABCC8Q09428 1581 aa29.87■■■□□ 2.37
CPT2-205ENST00000636239 CCDC88BA6NC98 1476 aa29.85■■■□□ 2.37
CPT2-205ENST00000636239 ZEB1P37275 1124 aaPredicted RBP29.82■■■□□ 2.36
CPT2-205ENST00000636239 PELP1Q8IZL8 1130 aaKnown RBP29.78■■■□□ 2.36
CPT2-205ENST00000636239 SMARCA2P51531 1590 aa29.77■■■□□ 2.36
CPT2-205ENST00000636239 SOGA1O94964 1423 aa29.59■■■□□ 2.33
CPT2-205ENST00000636239 TTBK1Q5TCY1 1321 aaPredicted RBP29.56■■■□□ 2.32
CPT2-205ENST00000636239 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.5■■■□□ 2.31
CPT2-205ENST00000636239 RUSC2Q8N2Y8 1516 aa29.48■■■□□ 2.31
CPT2-205ENST00000636239 CEP162Q5TB80 1403 aa29.43■■■□□ 2.3
CPT2-205ENST00000636239 CSRNP3Q8WYN3 585 aa29.38■■■□□ 2.29
CPT2-205ENST00000636239 CCER1Q8TC90 406 aaPredicted RBP29.35■■■□□ 2.29
CPT2-205ENST00000636239 UBTFP17480 764 aaKnown RBP29.35■■■□□ 2.29
CPT2-205ENST00000636239 TNIKQ9UKE5 1360 aa29.31■■■□□ 2.28
CPT2-205ENST00000636239 PEG3Q9GZU2 1588 aa29.3■■■□□ 2.28
CPT2-205ENST00000636239 WRNQ14191 1432 aaPredicted RBP eCLIP29.3■■■□□ 2.28
CPT2-205ENST00000636239 ATAD2BQ9ULI0 1458 aa29.3■■■□□ 2.28
CPT2-205ENST00000636239 EEA1Q15075 1411 aa29.23■■■□□ 2.27
CPT2-205ENST00000636239 BAZ1BQ9UIG0 1483 aaKnown RBP29.17■■■□□ 2.26
CPT2-205ENST00000636239 SYNJ1O43426 1573 aa29.15■■■□□ 2.26
CPT2-205ENST00000636239 GOLGA3Q08378 1498 aa29.14■■■□□ 2.26
CPT2-205ENST00000636239 CEP164Q9UPV0 1460 aa28.95■■■□□ 2.23
CPT2-205ENST00000636239 RANGAP1P46060 587 aaPredicted RBP28.92■■■□□ 2.22
CPT2-205ENST00000636239 SCAF1Q9H7N4 1312 aaKnown RBP28.91■■■□□ 2.22
CPT2-205ENST00000636239 KIF21BO75037 1637 aa28.88■■■□□ 2.21
CPT2-205ENST00000636239 CLIP1P30622 1438 aa28.86■■■□□ 2.21
CPT2-205ENST00000636239 RAPGEF2Q9Y4G8 1499 aa28.84■■■□□ 2.21
CPT2-205ENST00000636239 NCAPD3P42695 1498 aa28.83■■■□□ 2.21
CPT2-205ENST00000636239 HNRNPUL2Q1KMD3 747 aaKnown RBP28.8■■■□□ 2.2
CPT2-205ENST00000636239 MYT1Q01538 1121 aa28.78■■■□□ 2.2
CPT2-205ENST00000636239 DIEXFQ68CQ4 756 aaKnown RBP28.78■■■□□ 2.2
CPT2-205ENST00000636239 HMGXB3Q12766 1538 aa28.71■■■□□ 2.19
CPT2-205ENST00000636239 VPS8Q8N3P4 1428 aa28.7■■■□□ 2.19
CPT2-205ENST00000636239 TOP2BQ02880 1626 aa28.69■■■□□ 2.18
CPT2-205ENST00000636239 APLP2Q06481 763 aa28.63■■■□□ 2.17
CPT2-205ENST00000636239 NEUROD1Q13562 356 aa28.59■■■□□ 2.17
CPT2-205ENST00000636239 BIVM-ERCC5R4GMW8 1640 aa28.57■■■□□ 2.16
CPT2-205ENST00000636239 ACIN1Q9UKV3 1341 aaKnown RBP28.55■■■□□ 2.16
CPT2-205ENST00000636239 ZNF316A6NFI3 1004 aaPredicted RBP28.53■■■□□ 2.16
CPT2-205ENST00000636239 CUX1P39880 1505 aa28.48■■■□□ 2.15
CPT2-205ENST00000636239 PRXQ9BXM0 1461 aa28.45■■■□□ 2.15
CPT2-205ENST00000636239 CC2D2AQ9P2K1 1620 aa28.45■■■□□ 2.15
CPT2-205ENST00000636239 CFTRP13569 1480 aa28.42■■■□□ 2.14
CPT2-205ENST00000636239 ARAP1Q96P48 1450 aa28.39■■■□□ 2.14
CPT2-205ENST00000636239 ERICH3Q5RHP9 1530 aa28.39■■■□□ 2.13
CPT2-205ENST00000636239 KANK4Q5T7N3 995 aaPredicted RBP28.36■■■□□ 2.13
CPT2-205ENST00000636239 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
CPT2-205ENST00000636239 CENPBP07199 599 aaPredicted RBP28.32■■■□□ 2.12
CPT2-205ENST00000636239 GTF3C3Q9Y5Q9 886 aa28.29■■■□□ 2.12
CPT2-205ENST00000636239 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.11
CPT2-205ENST00000636239 YTHDC1Q96MU7 727 aaKnown RBP28.24■■■□□ 2.11
CPT2-205ENST00000636239 MIER1Q8N108 512 aa28.21■■■□□ 2.11
CPT2-205ENST00000636239 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.09
CPT2-205ENST00000636239 DHX57Q6P158 1386 aaKnown RBP28.11■■■□□ 2.09
CPT2-205ENST00000636239 CUX2O14529 1486 aa28.11■■■□□ 2.09
CPT2-205ENST00000636239 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
CPT2-205ENST00000636239 ITGAEP38570 1179 aa28.06■■■□□ 2.08
CPT2-205ENST00000636239 IGF1RP08069 1367 aa28.05■■■□□ 2.08
CPT2-205ENST00000636239 PRDM2Q13029 1718 aa28.05■■■□□ 2.08
CPT2-205ENST00000636239 NESP48681 1621 aa28.03■■■□□ 2.08
CPT2-205ENST00000636239 RRBP1Q9P2E9 1410 aaKnown RBP28.02■■■□□ 2.08
CPT2-205ENST00000636239 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
CPT2-205ENST00000636239 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
CPT2-205ENST00000636239 CCNB3Q8WWL7 1395 aa27.95■■■□□ 2.07
CPT2-205ENST00000636239 CARMIL1Q5VZK9 1371 aa27.93■■■□□ 2.06
CPT2-205ENST00000636239 CLSPNQ9HAW4 1339 aa27.93■■■□□ 2.06
CPT2-205ENST00000636239 P3H3Q8IVL6 736 aa27.88■■■□□ 2.05
CPT2-205ENST00000636239 TIAM1Q13009 1591 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms