RNA–Protein interactions for RNA: ENST00000635888.1

CPT2-204, Transcript of carnitine palmitoyltransferase 2, humanhuman

TSL 5

Gene CPT2, Length 2,889 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT2-204ENST00000635888 NISCHQ9Y2I1 1504 aa33.22■■■□□ 2.91
CPT2-204ENST00000635888 CCDC180Q9P1Z9 1646 aa28.74■■■□□ 2.19
CPT2-204ENST00000635888 SHROOM4Q9ULL8 1493 aa28.38■■■□□ 2.13
CPT2-204ENST00000635888 SUPT5HO00267 1087 aaKnown RBP28.07■■■□□ 2.08
CPT2-204ENST00000635888 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
CPT2-204ENST00000635888 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
CPT2-204ENST00000635888 ABCC9O60706 1549 aa27.57■■■□□ 2
CPT2-204ENST00000635888 MYO15BQ96JP2 1530 aa27.33■■□□□ 1.97
CPT2-204ENST00000635888 HRCP23327 699 aa27.3■■□□□ 1.96
CPT2-204ENST00000635888 DCAF1Q9Y4B6 1507 aa27.25■■□□□ 1.95
CPT2-204ENST00000635888 CHIC1Q5VXU3 224 aa27.25■■□□□ 1.95
CPT2-204ENST00000635888 PCGF6Q9BYE7 350 aa27.21■■□□□ 1.95
CPT2-204ENST00000635888 PPARGC1BQ86YN6 1023 aaKnown RBP27.07■■□□□ 1.92
CPT2-204ENST00000635888 NACADO15069 1562 aa26.82■■□□□ 1.88
CPT2-204ENST00000635888 SCRIBQ14160 1630 aa26.78■■□□□ 1.88
CPT2-204ENST00000635888 LOC105371045A0A1W2PR82 267 aa26.77■■□□□ 1.88
CPT2-204ENST00000635888 RB1CC1Q8TDY2 1594 aa26.63■■□□□ 1.85
CPT2-204ENST00000635888 TRIM26Q12899 539 aaPredicted RBP26.23■■□□□ 1.79
CPT2-204ENST00000635888 UNC13AQ9UPW8 1703 aa26.21■■□□□ 1.79
CPT2-204ENST00000635888 PABPN1Q86U42 306 aaKnown RBP eCLIP26.13■■□□□ 1.77
CPT2-204ENST00000635888 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
CPT2-204ENST00000635888 FAM9AQ8IZU1 332 aaPredicted RBP26.05■■□□□ 1.76
CPT2-204ENST00000635888 CECR2Q9BXF3 1484 aa26.01■■□□□ 1.75
CPT2-204ENST00000635888 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
CPT2-204ENST00000635888 RSF1Q96T23 1441 aaPredicted RBP25.88■■□□□ 1.73
CPT2-204ENST00000635888 TRIM41Q8WV44 630 aa25.86■■□□□ 1.73
CPT2-204ENST00000635888 MROH2BQ7Z745 1585 aa25.79■■□□□ 1.72
CPT2-204ENST00000635888 ZEB1P37275 1124 aaPredicted RBP25.7■■□□□ 1.7
CPT2-204ENST00000635888 SCAF1Q9H7N4 1312 aaKnown RBP25.67■■□□□ 1.7
CPT2-204ENST00000635888 BAZ1AQ9NRL2 1556 aaPredicted RBP25.59■■□□□ 1.69
CPT2-204ENST00000635888 WIZO95785 1651 aa25.59■■□□□ 1.69
CPT2-204ENST00000635888 SMARCA4P51532 1647 aa25.53■■□□□ 1.68
CPT2-204ENST00000635888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.42■■□□□ 1.66
CPT2-204ENST00000635888 TTBK1Q5TCY1 1321 aaPredicted RBP25.34■■□□□ 1.65
CPT2-204ENST00000635888 PELP1Q8IZL8 1130 aaKnown RBP25.31■■□□□ 1.64
CPT2-204ENST00000635888 CCER1Q8TC90 406 aaPredicted RBP25.26■■□□□ 1.63
CPT2-204ENST00000635888 NEUROD1Q13562 356 aa25.18■■□□□ 1.62
CPT2-204ENST00000635888 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
CPT2-204ENST00000635888 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
CPT2-204ENST00000635888 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.62
CPT2-204ENST00000635888 ACIN1Q9UKV3 1341 aaKnown RBP25.1■■□□□ 1.61
CPT2-204ENST00000635888 PEG3Q9GZU2 1588 aa25.08■■□□□ 1.61
CPT2-204ENST00000635888 CCDC88BA6NC98 1476 aa25.03■■□□□ 1.6
CPT2-204ENST00000635888 DIEXFQ68CQ4 756 aaKnown RBP25■■□□□ 1.59
CPT2-204ENST00000635888 BAZ1BQ9UIG0 1483 aaKnown RBP25■■□□□ 1.59
CPT2-204ENST00000635888 SMARCA2P51531 1590 aa25■■□□□ 1.59
CPT2-204ENST00000635888 GTF3C3Q9Y5Q9 886 aa24.99■■□□□ 1.59
CPT2-204ENST00000635888 NCAPD3P42695 1498 aa24.83■■□□□ 1.57
CPT2-204ENST00000635888 CC2D2AQ9P2K1 1620 aa24.81■■□□□ 1.56
CPT2-204ENST00000635888 CENPBP07199 599 aaPredicted RBP24.79■■□□□ 1.56
CPT2-204ENST00000635888 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
CPT2-204ENST00000635888 HMGXB3Q12766 1538 aa24.73■■□□□ 1.55
CPT2-204ENST00000635888 ABCC8Q09428 1581 aa24.72■■□□□ 1.55
CPT2-204ENST00000635888 UBTFP17480 764 aaKnown RBP24.65■■□□□ 1.54
CPT2-204ENST00000635888 CEP162Q5TB80 1403 aa24.65■■□□□ 1.54
CPT2-204ENST00000635888 SOGA1O94964 1423 aa24.63■■□□□ 1.53
CPT2-204ENST00000635888 ZNF316A6NFI3 1004 aaPredicted RBP24.57■■□□□ 1.52
CPT2-204ENST00000635888 DNAJC5BQ9UF47 199 aa24.56■■□□□ 1.52
CPT2-204ENST00000635888 HNRNPUL2Q1KMD3 747 aaKnown RBP24.55■■□□□ 1.52
CPT2-204ENST00000635888 RUSC2Q8N2Y8 1516 aa24.52■■□□□ 1.52
CPT2-204ENST00000635888 WRNQ14191 1432 aaPredicted RBP eCLIP24.5■■□□□ 1.51
CPT2-204ENST00000635888 MIER1Q8N108 512 aa24.48■■□□□ 1.51
CPT2-204ENST00000635888 CSRNP3Q8WYN3 585 aa24.47■■□□□ 1.51
CPT2-204ENST00000635888 TNIKQ9UKE5 1360 aa24.42■■□□□ 1.5
CPT2-204ENST00000635888 RANGAP1P46060 587 aaPredicted RBP24.42■■□□□ 1.5
CPT2-204ENST00000635888 CFTRP13569 1480 aa24.33■■□□□ 1.49
CPT2-204ENST00000635888 SYNJ1O43426 1573 aa24.28■■□□□ 1.48
CPT2-204ENST00000635888 CADPSQ9ULU8 1353 aa24.27■■□□□ 1.48
CPT2-204ENST00000635888 NESP48681 1621 aa24.24■■□□□ 1.47
CPT2-204ENST00000635888 GOLGA3Q08378 1498 aa24.19■■□□□ 1.46
CPT2-204ENST00000635888 EEA1Q15075 1411 aa24.11■■□□□ 1.45
CPT2-204ENST00000635888 APLP2Q06481 763 aa24.09■■□□□ 1.45
CPT2-204ENST00000635888 CUX1P39880 1505 aa24.08■■□□□ 1.45
CPT2-204ENST00000635888 CLIP1P30622 1438 aa24.08■■□□□ 1.44
CPT2-204ENST00000635888 PRDM2Q13029 1718 aa24.05■■□□□ 1.44
CPT2-204ENST00000635888 MYT1Q01538 1121 aa24.04■■□□□ 1.44
CPT2-204ENST00000635888 TOP2BQ02880 1626 aa24.04■■□□□ 1.44
CPT2-204ENST00000635888 FANCD2Q9BXW9 1451 aa24.04■■□□□ 1.44
CPT2-204ENST00000635888 BIVM-ERCC5R4GMW8 1640 aa23.97■■□□□ 1.43
CPT2-204ENST00000635888 CEP164Q9UPV0 1460 aa23.96■■□□□ 1.43
CPT2-204ENST00000635888 LAMC3Q9Y6N6 1575 aa23.93■■□□□ 1.42
CPT2-204ENST00000635888 VPS8Q8N3P4 1428 aa23.93■■□□□ 1.42
CPT2-204ENST00000635888 RAPGEF2Q9Y4G8 1499 aa23.92■■□□□ 1.42
CPT2-204ENST00000635888 SUPT16HQ9Y5B9 1047 aaKnown RBP23.83■■□□□ 1.41
CPT2-204ENST00000635888 FGD5Q6ZNL6 1462 aa23.81■■□□□ 1.4
CPT2-204ENST00000635888 PDS5BQ9NTI5 1447 aa23.81■■□□□ 1.4
CPT2-204ENST00000635888 KANK4Q5T7N3 995 aaPredicted RBP23.81■■□□□ 1.4
CPT2-204ENST00000635888 ITGAEP38570 1179 aa23.8■■□□□ 1.4
CPT2-204ENST00000635888 KIF21AQ7Z4S6 1674 aa23.8■■□□□ 1.4
CPT2-204ENST00000635888 KIF21BO75037 1637 aa23.79■■□□□ 1.4
CPT2-204ENST00000635888 DHX57Q6P158 1386 aaKnown RBP23.79■■□□□ 1.4
CPT2-204ENST00000635888 URB2Q14146 1524 aaKnown RBP23.77■■□□□ 1.4
CPT2-204ENST00000635888 TOPBP1Q92547 1522 aa23.77■■□□□ 1.4
CPT2-204ENST00000635888 KCNH8Q96L42 1107 aa23.74■■□□□ 1.39
CPT2-204ENST00000635888 DNMBPQ6XZF7 1577 aa23.73■■□□□ 1.39
CPT2-204ENST00000635888 RAD54L2Q9Y4B4 1467 aa23.73■■□□□ 1.39
CPT2-204ENST00000635888 CUX2O14529 1486 aa23.69■■□□□ 1.38
CPT2-204ENST00000635888 POLA1P09884 1462 aaPredicted RBP23.69■■□□□ 1.38
CPT2-204ENST00000635888 KIF27Q86VH2 1401 aa23.66■■□□□ 1.38
CPT2-204ENST00000635888 BCANQ96GW7 911 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms