RNA–Protein interactions for RNA: ENST00000628473.1

ZEB2-228, Transcript of zinc finger E-box binding homeobox 2, humanhuman

Gene ZEB2, Length 2,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-228ENST00000628473 NISCHQ9Y2I1 1504 aa14.66□□□□□ -0.06
ZEB2-228ENST00000628473 CCDC180Q9P1Z9 1646 aa12.63□□□□□ -0.39
ZEB2-228ENST00000628473 ZCCHC6Q5VYS8 1495 aaKnown RBP12.43□□□□□ -0.42
ZEB2-228ENST00000628473 DCAF1Q9Y4B6 1507 aa12.22□□□□□ -0.45
ZEB2-228ENST00000628473 SHROOM4Q9ULL8 1493 aa12.11□□□□□ -0.47
ZEB2-228ENST00000628473 MYO15BQ96JP2 1530 aa11.92□□□□□ -0.5
ZEB2-228ENST00000628473 SUPT5HO00267 1087 aaKnown RBP11.92□□□□□ -0.5
ZEB2-228ENST00000628473 DCAF8L2P0C7V8 631 aa11.76□□□□□ -0.53
ZEB2-228ENST00000628473 CHIC1Q5VXU3 224 aa11.73□□□□□ -0.53
ZEB2-228ENST00000628473 ABCC9O60706 1549 aa11.73□□□□□ -0.53
ZEB2-228ENST00000628473 NACADO15069 1562 aa11.64□□□□□ -0.55
ZEB2-228ENST00000628473 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
ZEB2-228ENST00000628473 RSF1Q96T23 1441 aaPredicted RBP11.52□□□□□ -0.56
ZEB2-228ENST00000628473 RB1CC1Q8TDY2 1594 aa11.51□□□□□ -0.57
ZEB2-228ENST00000628473 HRCP23327 699 aa11.41□□□□□ -0.58
ZEB2-228ENST00000628473 AEBP2Q6ZN18 517 aaPredicted RBP11.4□□□□□ -0.58
ZEB2-228ENST00000628473 BAZ1AQ9NRL2 1556 aaPredicted RBP11.31□□□□□ -0.6
ZEB2-228ENST00000628473 MROH2BQ7Z745 1585 aa11.29□□□□□ -0.6
ZEB2-228ENST00000628473 CECR2Q9BXF3 1484 aa11.26□□□□□ -0.61
ZEB2-228ENST00000628473 TRIM41Q8WV44 630 aa11.25□□□□□ -0.61
ZEB2-228ENST00000628473 PCGF6Q9BYE7 350 aa11.25□□□□□ -0.61
ZEB2-228ENST00000628473 TRIM26Q12899 539 aaPredicted RBP11.24□□□□□ -0.61
ZEB2-228ENST00000628473 WIZO95785 1651 aa11.22□□□□□ -0.61
ZEB2-228ENST00000628473 LOC105371045A0A1W2PR82 267 aa11.22□□□□□ -0.61
ZEB2-228ENST00000628473 EIF4G1Q04637 1599 aaKnown RBP11.2□□□□□ -0.62
ZEB2-228ENST00000628473 TOP2AP11388 1531 aaKnown RBP11.19□□□□□ -0.62
ZEB2-228ENST00000628473 SMARCA4P51532 1647 aa11.16□□□□□ -0.62
ZEB2-228ENST00000628473 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
ZEB2-228ENST00000628473 UNC13AQ9UPW8 1703 aa11.13□□□□□ -0.63
ZEB2-228ENST00000628473 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
ZEB2-228ENST00000628473 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
ZEB2-228ENST00000628473 EEA1Q15075 1411 aa11.04□□□□□ -0.64
ZEB2-228ENST00000628473 CCDC88BA6NC98 1476 aa11.03□□□□□ -0.64
ZEB2-228ENST00000628473 BICRAQ9NZM4 1560 aa10.99□□□□□ -0.65
ZEB2-228ENST00000628473 WRNQ14191 1432 aaPredicted RBP eCLIP10.97□□□□□ -0.65
ZEB2-228ENST00000628473 FAM9AQ8IZU1 332 aaPredicted RBP10.94□□□□□ -0.66
ZEB2-228ENST00000628473 TNIKQ9UKE5 1360 aa10.91□□□□□ -0.66
ZEB2-228ENST00000628473 ABCC8Q09428 1581 aa10.9□□□□□ -0.66
ZEB2-228ENST00000628473 PPARGC1BQ86YN6 1023 aaKnown RBP10.9□□□□□ -0.66
ZEB2-228ENST00000628473 GOLGA3Q08378 1498 aa10.84□□□□□ -0.67
ZEB2-228ENST00000628473 ATAD2BQ9ULI0 1458 aa10.84□□□□□ -0.67
ZEB2-228ENST00000628473 KIF21BO75037 1637 aa10.84□□□□□ -0.67
ZEB2-228ENST00000628473 CEP162Q5TB80 1403 aa10.83□□□□□ -0.68
ZEB2-228ENST00000628473 CSRNP3Q8WYN3 585 aa10.82□□□□□ -0.68
ZEB2-228ENST00000628473 BAZ1BQ9UIG0 1483 aaKnown RBP10.81□□□□□ -0.68
ZEB2-228ENST00000628473 CEP164Q9UPV0 1460 aa10.8□□□□□ -0.68
ZEB2-228ENST00000628473 SOGA1O94964 1423 aa10.8□□□□□ -0.68
ZEB2-228ENST00000628473 HMGXB3Q12766 1538 aa10.76□□□□□ -0.69
ZEB2-228ENST00000628473 SYNJ1O43426 1573 aa10.76□□□□□ -0.69
ZEB2-228ENST00000628473 TOP2BQ02880 1626 aa10.74□□□□□ -0.69
ZEB2-228ENST00000628473 BIVM-ERCC5R4GMW8 1640 aa10.73□□□□□ -0.69
ZEB2-228ENST00000628473 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
ZEB2-228ENST00000628473 NCAPD3P42695 1498 aa10.71□□□□□ -0.69
ZEB2-228ENST00000628473 RUSC2Q8N2Y8 1516 aa10.7□□□□□ -0.7
ZEB2-228ENST00000628473 ERICH3Q5RHP9 1530 aa10.69□□□□□ -0.7
ZEB2-228ENST00000628473 EHMT2Q96KQ7 1210 aa10.68□□□□□ -0.7
ZEB2-228ENST00000628473 UBTFP17480 764 aaKnown RBP10.68□□□□□ -0.7
ZEB2-228ENST00000628473 CCER1Q8TC90 406 aaPredicted RBP10.66□□□□□ -0.7
ZEB2-228ENST00000628473 VPS8Q8N3P4 1428 aa10.66□□□□□ -0.7
ZEB2-228ENST00000628473 CLIP1P30622 1438 aa10.64□□□□□ -0.71
ZEB2-228ENST00000628473 PRDM2Q13029 1718 aa10.63□□□□□ -0.71
ZEB2-228ENST00000628473 PRXQ9BXM0 1461 aa10.6□□□□□ -0.71
ZEB2-228ENST00000628473 CFTRP13569 1480 aa10.59□□□□□ -0.71
ZEB2-228ENST00000628473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.58□□□□□ -0.72
ZEB2-228ENST00000628473 RAPGEF2Q9Y4G8 1499 aa10.58□□□□□ -0.72
ZEB2-228ENST00000628473 KIF27Q86VH2 1401 aa10.55□□□□□ -0.72
ZEB2-228ENST00000628473 APLP2Q06481 763 aa10.54□□□□□ -0.72
ZEB2-228ENST00000628473 CUX1P39880 1505 aa10.54□□□□□ -0.72
ZEB2-228ENST00000628473 CLSPNQ9HAW4 1339 aa10.53□□□□□ -0.72
ZEB2-228ENST00000628473 PELP1Q8IZL8 1130 aaKnown RBP10.51□□□□□ -0.73
ZEB2-228ENST00000628473 ARAP1Q96P48 1450 aa10.48□□□□□ -0.73
ZEB2-228ENST00000628473 DIEXFQ68CQ4 756 aaKnown RBP10.47□□□□□ -0.73
ZEB2-228ENST00000628473 MAP3K1Q13233 1512 aa10.47□□□□□ -0.73
ZEB2-228ENST00000628473 ZNF316A6NFI3 1004 aaPredicted RBP10.46□□□□□ -0.74
ZEB2-228ENST00000628473 CENPBP07199 599 aaPredicted RBP10.44□□□□□ -0.74
ZEB2-228ENST00000628473 CADPSQ9ULU8 1353 aa10.44□□□□□ -0.74
ZEB2-228ENST00000628473 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
ZEB2-228ENST00000628473 CUX2O14529 1486 aa10.44□□□□□ -0.74
ZEB2-228ENST00000628473 ACIN1Q9UKV3 1341 aaKnown RBP10.41□□□□□ -0.74
ZEB2-228ENST00000628473 SCAF1Q9H7N4 1312 aaKnown RBP10.39□□□□□ -0.75
ZEB2-228ENST00000628473 ARHGAP35Q9NRY4 1499 aa10.39□□□□□ -0.75
ZEB2-228ENST00000628473 TTBK1Q5TCY1 1321 aaPredicted RBP10.38□□□□□ -0.75
ZEB2-228ENST00000628473 IGF1RP08069 1367 aa10.37□□□□□ -0.75
ZEB2-228ENST00000628473 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
ZEB2-228ENST00000628473 FHAD1B1AJZ9 1412 aa10.35□□□□□ -0.75
ZEB2-228ENST00000628473 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
ZEB2-228ENST00000628473 DNMBPQ6XZF7 1577 aa10.35□□□□□ -0.75
ZEB2-228ENST00000628473 FGD5Q6ZNL6 1462 aa10.34□□□□□ -0.75
ZEB2-228ENST00000628473 TIAM1Q13009 1591 aa10.34□□□□□ -0.75
ZEB2-228ENST00000628473 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
ZEB2-228ENST00000628473 CUL7Q14999 1698 aa10.33□□□□□ -0.76
ZEB2-228ENST00000628473 CARMIL1Q5VZK9 1371 aa10.33□□□□□ -0.76
ZEB2-228ENST00000628473 DHX57Q6P158 1386 aaKnown RBP10.33□□□□□ -0.76
ZEB2-228ENST00000628473 CCNB3Q8WWL7 1395 aa10.33□□□□□ -0.76
ZEB2-228ENST00000628473 ABCA10Q8WWZ4 1543 aa10.32□□□□□ -0.76
ZEB2-228ENST00000628473 CFAP43Q8NDM7 1665 aa10.32□□□□□ -0.76
ZEB2-228ENST00000628473 AQRO60306 1485 aaKnown RBP eCLIP10.31□□□□□ -0.76
ZEB2-228ENST00000628473 FANCD2Q9BXW9 1451 aa10.31□□□□□ -0.76
ZEB2-228ENST00000628473 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.29□□□□□ -0.76
ZEB2-228ENST00000628473 NEUROD1Q13562 356 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms