RNA–Protein interactions for RNA: ENST00000626258.2

LINC01378-206, Transcript of long intergenic non-protein coding RNA 1378, humanhuman

TSL 5

Gene LINC01378, Length 512 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01378-206ENST00000626258 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
LINC01378-206ENST00000626258 CHIC1Q5VXU3 224 aa22.54■■□□□ 1.2
LINC01378-206ENST00000626258 NISCHQ9Y2I1 1504 aa20.69■□□□□ 0.9
LINC01378-206ENST00000626258 SENP3Q9H4L4 574 aaPredicted RBP20.09■□□□□ 0.81
LINC01378-206ENST00000626258 PHF23Q9BUL5 403 aaPredicted RBP19.88■□□□□ 0.77
LINC01378-206ENST00000626258 FOXD1Q16676 465 aa18.79■□□□□ 0.6
LINC01378-206ENST00000626258 PLPPR3Q6T4P5 718 aa18.57■□□□□ 0.56
LINC01378-206ENST00000626258 CCDC180Q9P1Z9 1646 aa18.37■□□□□ 0.53
LINC01378-206ENST00000626258 ABCC9O60706 1549 aa17.81■□□□□ 0.44
LINC01378-206ENST00000626258 POTEDQ86YR6 584 aa17.78■□□□□ 0.44
LINC01378-206ENST00000626258 MSH5O43196 834 aa17.67■□□□□ 0.42
LINC01378-206ENST00000626258 PIAS4Q8N2W9 510 aaPredicted RBP17.45■□□□□ 0.38
LINC01378-206ENST00000626258 ADRA2BP18089 450 aa17.39■□□□□ 0.37
LINC01378-206ENST00000626258 PPP6R1Q9UPN7 881 aa17.38■□□□□ 0.37
LINC01378-206ENST00000626258 ZCCHC6Q5VYS8 1495 aaKnown RBP17.28■□□□□ 0.36
LINC01378-206ENST00000626258 NACADO15069 1562 aa17.23■□□□□ 0.35
LINC01378-206ENST00000626258 MYO15BQ96JP2 1530 aa17.21■□□□□ 0.35
LINC01378-206ENST00000626258 RB1CC1Q8TDY2 1594 aa17.2■□□□□ 0.34
LINC01378-206ENST00000626258 DCAF1Q9Y4B6 1507 aa17.17■□□□□ 0.34
LINC01378-206ENST00000626258 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
LINC01378-206ENST00000626258 UNC13AQ9UPW8 1703 aa16.84■□□□□ 0.29
LINC01378-206ENST00000626258 BICRAQ9NZM4 1560 aa16.73■□□□□ 0.27
LINC01378-206ENST00000626258 SCRIBQ14160 1630 aa16.71■□□□□ 0.27
LINC01378-206ENST00000626258 KCNA4P22459 653 aa16.71■□□□□ 0.27
LINC01378-206ENST00000626258 PABPN1Q86U42 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
LINC01378-206ENST00000626258 SHROOM4Q9ULL8 1493 aa16.57■□□□□ 0.24
LINC01378-206ENST00000626258 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
LINC01378-206ENST00000626258 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
LINC01378-206ENST00000626258 EIF4G1Q04637 1599 aaKnown RBP16.25■□□□□ 0.19
LINC01378-206ENST00000626258 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
LINC01378-206ENST00000626258 NCBP3Q53F19 620 aaKnown RBP16.2■□□□□ 0.18
LINC01378-206ENST00000626258 CC2D2AQ9P2K1 1620 aa16.15■□□□□ 0.18
LINC01378-206ENST00000626258 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
LINC01378-206ENST00000626258 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
LINC01378-206ENST00000626258 SMARCA4P51532 1647 aa16.03■□□□□ 0.16
LINC01378-206ENST00000626258 BAZ1AQ9NRL2 1556 aaPredicted RBP16.02■□□□□ 0.16
LINC01378-206ENST00000626258 MROH2BQ7Z745 1585 aa15.95■□□□□ 0.14
LINC01378-206ENST00000626258 MAPK8IP2Q13387 824 aaPredicted RBP15.94■□□□□ 0.14
LINC01378-206ENST00000626258 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
LINC01378-206ENST00000626258 ATAD2BQ9ULI0 1458 aa15.93■□□□□ 0.14
LINC01378-206ENST00000626258 NPM3O75607 178 aaKnown RBP15.93■□□□□ 0.14
LINC01378-206ENST00000626258 PEG3Q9GZU2 1588 aa15.92■□□□□ 0.14
LINC01378-206ENST00000626258 NCAPD3P42695 1498 aa15.91■□□□□ 0.14
LINC01378-206ENST00000626258 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
LINC01378-206ENST00000626258 SMARCA2P51531 1590 aa15.89■□□□□ 0.13
LINC01378-206ENST00000626258 CNKSR2Q8WXI2 1034 aa15.85■□□□□ 0.13
LINC01378-206ENST00000626258 HMGXB3Q12766 1538 aa15.84■□□□□ 0.13
LINC01378-206ENST00000626258 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
LINC01378-206ENST00000626258 CSRNP3Q8WYN3 585 aa15.8■□□□□ 0.12
LINC01378-206ENST00000626258 BAZ1BQ9UIG0 1483 aaKnown RBP15.76■□□□□ 0.11
LINC01378-206ENST00000626258 WIZO95785 1651 aa15.76■□□□□ 0.11
LINC01378-206ENST00000626258 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
LINC01378-206ENST00000626258 NESP48681 1621 aa15.46■□□□□ 0.07
LINC01378-206ENST00000626258 LAMC3Q9Y6N6 1575 aa15.45■□□□□ 0.06
LINC01378-206ENST00000626258 CADPSQ9ULU8 1353 aa15.43■□□□□ 0.06
LINC01378-206ENST00000626258 CCDC88BA6NC98 1476 aa15.42■□□□□ 0.06
LINC01378-206ENST00000626258 RNF216Q9NWF9 866 aaPredicted RBP15.39■□□□□ 0.05
LINC01378-206ENST00000626258 CFTRP13569 1480 aa15.38■□□□□ 0.05
LINC01378-206ENST00000626258 ZBTB22O15209 634 aa15.37■□□□□ 0.05
LINC01378-206ENST00000626258 SUPT5HO00267 1087 aaKnown RBP15.36■□□□□ 0.05
LINC01378-206ENST00000626258 PDS5BQ9NTI5 1447 aa15.32■□□□□ 0.04
LINC01378-206ENST00000626258 CACNB1Q02641 598 aaPredicted RBP15.31■□□□□ 0.04
LINC01378-206ENST00000626258 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
LINC01378-206ENST00000626258 KIF21AQ7Z4S6 1674 aa15.28■□□□□ 0.04
LINC01378-206ENST00000626258 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
LINC01378-206ENST00000626258 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
LINC01378-206ENST00000626258 FANCD2Q9BXW9 1451 aa15.24■□□□□ 0.03
LINC01378-206ENST00000626258 HOXD11P31277 338 aaPredicted RBP15.22■□□□□ 0.03
LINC01378-206ENST00000626258 CEP164Q9UPV0 1460 aa15.2■□□□□ 0.02
LINC01378-206ENST00000626258 FOXD4L1Q9NU39 408 aa15.2■□□□□ 0.02
LINC01378-206ENST00000626258 CUX2O14529 1486 aa15.18■□□□□ 0.02
LINC01378-206ENST00000626258 MRC2Q9UBG0 1479 aa15.17■□□□□ 0.02
LINC01378-206ENST00000626258 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
LINC01378-206ENST00000626258 WDR62O43379 1518 aa15.15■□□□□ 0.02
LINC01378-206ENST00000626258 URB2Q14146 1524 aaKnown RBP15.11■□□□□ 0.01
LINC01378-206ENST00000626258 RNF39Q9H2S5 420 aa15.08■□□□□ 0
LINC01378-206ENST00000626258 TOPBP1Q92547 1522 aa15.02■□□□□ -0
LINC01378-206ENST00000626258 DNMBPQ6XZF7 1577 aa15.02□□□□□ -0.01
LINC01378-206ENST00000626258 ABCC8Q09428 1581 aa15.01□□□□□ -0.01
LINC01378-206ENST00000626258 CUX1P39880 1505 aa14.96□□□□□ -0.02
LINC01378-206ENST00000626258 SLC4A2P04920 1241 aa14.91□□□□□ -0.02
LINC01378-206ENST00000626258 POLA1P09884 1462 aaPredicted RBP14.9□□□□□ -0.02
LINC01378-206ENST00000626258 IFT140Q96RY7 1462 aa14.89□□□□□ -0.03
LINC01378-206ENST00000626258 TARBP1Q13395 1621 aaKnown RBP14.88□□□□□ -0.03
LINC01378-206ENST00000626258 FGD5Q6ZNL6 1462 aa14.87□□□□□ -0.03
LINC01378-206ENST00000626258 WRNQ14191 1432 aaPredicted RBP eCLIP14.86□□□□□ -0.03
LINC01378-206ENST00000626258 BIVM-ERCC5R4GMW8 1640 aa14.86□□□□□ -0.03
LINC01378-206ENST00000626258 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
LINC01378-206ENST00000626258 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
LINC01378-206ENST00000626258 ZNF608Q9ULD9 1512 aaPredicted RBP14.82□□□□□ -0.04
LINC01378-206ENST00000626258 RAD54L2Q9Y4B4 1467 aa14.82□□□□□ -0.04
LINC01378-206ENST00000626258 C1QBPQ07021 282 aaKnown RBP14.81□□□□□ -0.04
LINC01378-206ENST00000626258 SOGA1O94964 1423 aa14.81□□□□□ -0.04
LINC01378-206ENST00000626258 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
LINC01378-206ENST00000626258 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.04
LINC01378-206ENST00000626258 ABCA10Q8WWZ4 1543 aa14.76□□□□□ -0.05
LINC01378-206ENST00000626258 AQRO60306 1485 aaKnown RBP eCLIP14.73□□□□□ -0.05
LINC01378-206ENST00000626258 TDRD9Q8NDG6 1382 aaKnown RBP14.72□□□□□ -0.05
LINC01378-206ENST00000626258 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
LINC01378-206ENST00000626258 ABCA5Q8WWZ7 1642 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms