RNA–Protein interactions for RNA: ENST00000626103.1

COMMD6-213, Transcript of COMM domain containing 6, humanhuman

TSL 5 BASIC

Gene COMMD6, Length 120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-213ENST00000626103 DNAJC5Q9H3Z4 198 aa5.72□□□□□ -1.49
COMMD6-213ENST00000626103 DNAJC5BQ9UF47 199 aa5.59□□□□□ -1.51
COMMD6-213ENST00000626103 ABCC9O60706 1549 aa5.18□□□□□ -1.58
COMMD6-213ENST00000626103 TRIM41Q8WV44 630 aa5.15□□□□□ -1.59
COMMD6-213ENST00000626103 AEBP2Q6ZN18 517 aaPredicted RBP5.09□□□□□ -1.59
COMMD6-213ENST00000626103 ILDR1Q86SU0 546 aaPredicted RBP5.08□□□□□ -1.6
COMMD6-213ENST00000626103 SLC24A1O60721 1099 aa4.79□□□□□ -1.64
COMMD6-213ENST00000626103 CUX2O14529 1486 aa4.78□□□□□ -1.64
COMMD6-213ENST00000626103 SOCS7O14512 581 aa4.76□□□□□ -1.65
COMMD6-213ENST00000626103 PABPN1Q86U42 306 aaKnown RBP eCLIP4.75□□□□□ -1.65
COMMD6-213ENST00000626103 CECR2Q9BXF3 1484 aa4.75□□□□□ -1.65
COMMD6-213ENST00000626103 LMTK3Q96Q04 1460 aa4.72□□□□□ -1.65
COMMD6-213ENST00000626103 NISCHQ9Y2I1 1504 aa4.71□□□□□ -1.66
COMMD6-213ENST00000626103 ILDR2Q71H61 639 aa4.65□□□□□ -1.67
COMMD6-213ENST00000626103 CC2D2AQ9P2K1 1620 aa4.63□□□□□ -1.67
COMMD6-213ENST00000626103 TRHP20396 242 aaPredicted RBP4.62□□□□□ -1.67
COMMD6-213ENST00000626103 FBXO41Q8TF61 875 aa4.57□□□□□ -1.68
COMMD6-213ENST00000626103 RB1CC1Q8TDY2 1594 aa4.55□□□□□ -1.68
COMMD6-213ENST00000626103 ERCC6Q03468 1493 aa4.53□□□□□ -1.68
COMMD6-213ENST00000626103 DISP3Q9P2K9 1392 aa4.52□□□□□ -1.69
COMMD6-213ENST00000626103 MYT1Q01538 1121 aa4.51□□□□□ -1.69
COMMD6-213ENST00000626103 RIMBP3CA6NJZ7 1639 aa4.47□□□□□ -1.69
COMMD6-213ENST00000626103 RIMBP3BA6NNM3 1639 aa4.47□□□□□ -1.69
COMMD6-213ENST00000626103 RIMBP3Q9UFD9 1639 aa4.47□□□□□ -1.69
COMMD6-213ENST00000626103 ERCC6L2Q5T890 1561 aa4.45□□□□□ -1.7
COMMD6-213ENST00000626103 BICRAQ9NZM4 1560 aa4.45□□□□□ -1.7
COMMD6-213ENST00000626103 UNC13AQ9UPW8 1703 aa4.44□□□□□ -1.7
COMMD6-213ENST00000626103 OSCARQ8IYS5 282 aa4.44□□□□□ -1.7
COMMD6-213ENST00000626103 TTBK1Q5TCY1 1321 aaPredicted RBP4.44□□□□□ -1.7
COMMD6-213ENST00000626103 EHMT2Q96KQ7 1210 aa4.42□□□□□ -1.7
COMMD6-213ENST00000626103 EIF4G1Q04637 1599 aaKnown RBP4.41□□□□□ -1.7
COMMD6-213ENST00000626103 CYB5RLQ6IPT4 315 aa4.4□□□□□ -1.71
COMMD6-213ENST00000626103 KDM4FA0A1W2PPD8 638 aa4.39□□□□□ -1.71
COMMD6-213ENST00000626103 PELP1Q8IZL8 1130 aaKnown RBP4.39□□□□□ -1.71
COMMD6-213ENST00000626103 DAXXQ9UER7 740 aaPredicted RBP4.39□□□□□ -1.71
COMMD6-213ENST00000626103 BAZ1AQ9NRL2 1556 aaPredicted RBP4.37□□□□□ -1.71
COMMD6-213ENST00000626103 ARHGEF11O15085 1522 aa4.36□□□□□ -1.71
COMMD6-213ENST00000626103 SPATA31D1Q6ZQQ2 1576 aa4.36□□□□□ -1.71
COMMD6-213ENST00000626103 HECW2Q9P2P5 1572 aa4.36□□□□□ -1.71
COMMD6-213ENST00000626103 CCDC180Q9P1Z9 1646 aa4.35□□□□□ -1.71
COMMD6-213ENST00000626103 ERICH6Q7L0X2 663 aa4.33□□□□□ -1.72
COMMD6-213ENST00000626103 THOC2Q8NI27 1593 aaKnown RBP4.32□□□□□ -1.72
COMMD6-213ENST00000626103 NACADO15069 1562 aa4.31□□□□□ -1.72
COMMD6-213ENST00000626103 CHIC1Q5VXU3 224 aa4.31□□□□□ -1.72
COMMD6-213ENST00000626103 SYNJ2O15056 1496 aa4.3□□□□□ -1.72
COMMD6-213ENST00000626103 SHROOM4Q9ULL8 1493 aa4.29□□□□□ -1.72
COMMD6-213ENST00000626103 ARAP1Q96P48 1450 aa4.28□□□□□ -1.72
COMMD6-213ENST00000626103 NCBP3Q53F19 620 aaKnown RBP4.25□□□□□ -1.73
COMMD6-213ENST00000626103 IFFO2Q5TF58 517 aa4.24□□□□□ -1.73
COMMD6-213ENST00000626103 NESP48681 1621 aa4.22□□□□□ -1.73
COMMD6-213ENST00000626103 RTN4Q9NQC3 1192 aaKnown RBP4.22□□□□□ -1.73
COMMD6-213ENST00000626103 RANGAP1P46060 587 aaPredicted RBP4.21□□□□□ -1.74
COMMD6-213ENST00000626103 AMER1Q5JTC6 1135 aaPredicted RBP4.21□□□□□ -1.74
COMMD6-213ENST00000626103 SMARCA2P51531 1590 aa4.21□□□□□ -1.74
COMMD6-213ENST00000626103 PLPPR3Q6T4P5 718 aa4.2□□□□□ -1.74
COMMD6-213ENST00000626103 APLP2Q06481 763 aa4.17□□□□□ -1.74
COMMD6-213ENST00000626103 DCAF8L2P0C7V8 631 aa4.16□□□□□ -1.74
COMMD6-213ENST00000626103 PRKCSHP14314 528 aaPredicted RBP4.15□□□□□ -1.75
COMMD6-213ENST00000626103 ADGRL1O94910 1474 aa4.15□□□□□ -1.75
COMMD6-213ENST00000626103 CERKQ8TCT0 537 aa4.14□□□□□ -1.75
COMMD6-213ENST00000626103 ARXQ96QS3 562 aa4.14□□□□□ -1.75
COMMD6-213ENST00000626103 KIF21AQ7Z4S6 1674 aa4.12□□□□□ -1.75
COMMD6-213ENST00000626103 RSF1Q96T23 1441 aaPredicted RBP4.09□□□□□ -1.75
COMMD6-213ENST00000626103 WDR62O43379 1518 aa4.08□□□□□ -1.76
COMMD6-213ENST00000626103 MRC2Q9UBG0 1479 aa4.06□□□□□ -1.76
COMMD6-213ENST00000626103 KDM6BO15054 1643 aa4.06□□□□□ -1.76
COMMD6-213ENST00000626103 PDS5BQ9NTI5 1447 aa4.05□□□□□ -1.76
COMMD6-213ENST00000626103 HOMEZQ8IX15 550 aa4.05□□□□□ -1.76
COMMD6-213ENST00000626103 KIF13AQ9H1H9 1805 aa4.05□□□□□ -1.76
COMMD6-213ENST00000626103 EIF5BO60841 1220 aaKnown RBP4.04□□□□□ -1.76
COMMD6-213ENST00000626103 LAMC3Q9Y6N6 1575 aa4.03□□□□□ -1.76
COMMD6-213ENST00000626103 KCNA4P22459 653 aa4.03□□□□□ -1.76
COMMD6-213ENST00000626103 TIMELESSQ9UNS1 1208 aa4.02□□□□□ -1.77
COMMD6-213ENST00000626103 SCRIBQ14160 1630 aa4.02□□□□□ -1.77
COMMD6-213ENST00000626103 TULP1O00294 542 aaPredicted RBP4.01□□□□□ -1.77
COMMD6-213ENST00000626103 NCAPD3P42695 1498 aa4□□□□□ -1.77
COMMD6-213ENST00000626103 SLC34A2O95436 690 aa4□□□□□ -1.77
COMMD6-213ENST00000626103 MED1Q15648 1581 aaPredicted RBP4□□□□□ -1.77
COMMD6-213ENST00000626103 BCANQ96GW7 911 aa3.99□□□□□ -1.77
COMMD6-213ENST00000626103 CSRNP3Q8WYN3 585 aa3.98□□□□□ -1.77
COMMD6-213ENST00000626103 CHD1O14646 1710 aa3.98□□□□□ -1.77
COMMD6-213ENST00000626103 MYO15BQ96JP2 1530 aa3.97□□□□□ -1.77
COMMD6-213ENST00000626103 PHF23Q9BUL5 403 aaPredicted RBP3.97□□□□□ -1.77
COMMD6-213ENST00000626103 PCDH10Q9P2E7 1040 aa3.97□□□□□ -1.77
COMMD6-213ENST00000626103 TAOK2Q9UL54 1235 aa3.97□□□□□ -1.77
COMMD6-213ENST00000626103 SRCAPQ6ZRS2 3230 aa3.97□□□□□ -1.77
COMMD6-213ENST00000626103 FAM69CQ0P6D2 419 aa3.96□□□□□ -1.78
COMMD6-213ENST00000626103 TPRNQ4KMQ1 711 aa3.95□□□□□ -1.78
COMMD6-213ENST00000626103 PODXL2Q9NZ53 605 aa3.95□□□□□ -1.78
COMMD6-213ENST00000626103 TOP2BQ02880 1626 aa3.95□□□□□ -1.78
COMMD6-213ENST00000626103 GAPVD1Q14C86 1478 aa3.94□□□□□ -1.78
COMMD6-213ENST00000626103 PCF11O94913 1555 aaKnown RBP3.93□□□□□ -1.78
COMMD6-213ENST00000626103 FBLN2P98095 1184 aa3.93□□□□□ -1.78
COMMD6-213ENST00000626103 SNAPC4Q5SXM2 1469 aa3.92□□□□□ -1.78
COMMD6-213ENST00000626103 ZNF608Q9ULD9 1512 aaPredicted RBP3.92□□□□□ -1.78
COMMD6-213ENST00000626103 CLASP1Q7Z460 1538 aa3.91□□□□□ -1.78
COMMD6-213ENST00000626103 ABCC10Q5T3U5 1492 aa3.91□□□□□ -1.78
COMMD6-213ENST00000626103 HAP1P54257 671 aaPredicted RBP3.9□□□□□ -1.79
COMMD6-213ENST00000626103 KLHL34Q8N239 644 aa3.9□□□□□ -1.79
COMMD6-213ENST00000626103 GTF3C3Q9Y5Q9 886 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms