RNA–Protein interactions for RNA: ENST00000624627.3

CU633967.1-204, humanhuman

TSL 2 BASIC

Gene CU633967.1, Length 1,604 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CU633967.1-204ENST00000624627 AEBP2Q6ZN18 517 aaPredicted RBP25.33■■□□□ 1.65
CU633967.1-204ENST00000624627 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
CU633967.1-204ENST00000624627 SENP3Q9H4L4 574 aaPredicted RBP21.74■■□□□ 1.07
CU633967.1-204ENST00000624627 PHF23Q9BUL5 403 aaPredicted RBP21.33■■□□□ 1
CU633967.1-204ENST00000624627 FOXD1Q16676 465 aa20.35■□□□□ 0.85
CU633967.1-204ENST00000624627 POTEDQ86YR6 584 aa20.24■□□□□ 0.83
CU633967.1-204ENST00000624627 MSH5O43196 834 aa19.37■□□□□ 0.69
CU633967.1-204ENST00000624627 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
CU633967.1-204ENST00000624627 PIAS4Q8N2W9 510 aaPredicted RBP18.82■□□□□ 0.6
CU633967.1-204ENST00000624627 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
CU633967.1-204ENST00000624627 ADRA2BP18089 450 aa18.29■□□□□ 0.52
CU633967.1-204ENST00000624627 PLPPR3Q6T4P5 718 aa18.25■□□□□ 0.51
CU633967.1-204ENST00000624627 DMRT2Q9Y5R5 561 aa17.12■□□□□ 0.33
CU633967.1-204ENST00000624627 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
CU633967.1-204ENST00000624627 MAPK8IP2Q13387 824 aaPredicted RBP17.03■□□□□ 0.32
CU633967.1-204ENST00000624627 CCDC180Q9P1Z9 1646 aa16.87■□□□□ 0.29
CU633967.1-204ENST00000624627 SCAF1Q9H7N4 1312 aaKnown RBP16.76■□□□□ 0.27
CU633967.1-204ENST00000624627 RNF39Q9H2S5 420 aa16.45■□□□□ 0.22
CU633967.1-204ENST00000624627 DCAF8L1A6NGE4 600 aa16.41■□□□□ 0.22
CU633967.1-204ENST00000624627 ABCC9O60706 1549 aa16.39■□□□□ 0.21
CU633967.1-204ENST00000624627 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
CU633967.1-204ENST00000624627 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
CU633967.1-204ENST00000624627 DCAF8L2P0C7V8 631 aa16.05■□□□□ 0.16
CU633967.1-204ENST00000624627 ZCCHC6Q5VYS8 1495 aaKnown RBP16.05■□□□□ 0.16
CU633967.1-204ENST00000624627 PPP4R3CPQ6ZMV5 832 aa15.88■□□□□ 0.13
CU633967.1-204ENST00000624627 DCAF1Q9Y4B6 1507 aa15.86■□□□□ 0.13
CU633967.1-204ENST00000624627 RNF216Q9NWF9 866 aaPredicted RBP15.85■□□□□ 0.13
CU633967.1-204ENST00000624627 NACADO15069 1562 aa15.85■□□□□ 0.13
CU633967.1-204ENST00000624627 MYO15BQ96JP2 1530 aa15.82■□□□□ 0.12
CU633967.1-204ENST00000624627 DNAJC5BQ9UF47 199 aa15.81■□□□□ 0.12
CU633967.1-204ENST00000624627 RB1CC1Q8TDY2 1594 aa15.79■□□□□ 0.12
CU633967.1-204ENST00000624627 CNKSR2Q8WXI2 1034 aa15.78■□□□□ 0.12
CU633967.1-204ENST00000624627 POTEHQ6S545 545 aa15.71■□□□□ 0.11
CU633967.1-204ENST00000624627 SCRIBQ14160 1630 aa15.5■□□□□ 0.07
CU633967.1-204ENST00000624627 UNC13AQ9UPW8 1703 aa15.44■□□□□ 0.06
CU633967.1-204ENST00000624627 SHROOM4Q9ULL8 1493 aa15.44■□□□□ 0.06
CU633967.1-204ENST00000624627 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
CU633967.1-204ENST00000624627 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.05
CU633967.1-204ENST00000624627 BICRAQ9NZM4 1560 aa15.36■□□□□ 0.05
CU633967.1-204ENST00000624627 DSG3P32926 999 aa15.13■□□□□ 0.01
CU633967.1-204ENST00000624627 NCBP3Q53F19 620 aaKnown RBP15.04■□□□□ -0
CU633967.1-204ENST00000624627 CAPN15O75808 1086 aa15□□□□□ -0.01
CU633967.1-204ENST00000624627 CECR2Q9BXF3 1484 aa15□□□□□ -0.01
CU633967.1-204ENST00000624627 SPINK5Q9NQ38 1064 aaPredicted RBP14.99□□□□□ -0.01
CU633967.1-204ENST00000624627 U3KPZ7 1027 aaPredicted RBP14.99□□□□□ -0.01
CU633967.1-204ENST00000624627 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
CU633967.1-204ENST00000624627 MROH2BQ7Z745 1585 aa14.84□□□□□ -0.03
CU633967.1-204ENST00000624627 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
CU633967.1-204ENST00000624627 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
CU633967.1-204ENST00000624627 NPM3O75607 178 aaKnown RBP14.81□□□□□ -0.04
CU633967.1-204ENST00000624627 CC2D2AQ9P2K1 1620 aa14.79□□□□□ -0.04
CU633967.1-204ENST00000624627 RSF1Q96T23 1441 aaPredicted RBP14.78□□□□□ -0.04
CU633967.1-204ENST00000624627 ATAD2BQ9ULI0 1458 aa14.72□□□□□ -0.05
CU633967.1-204ENST00000624627 WIZO95785 1651 aa14.68□□□□□ -0.06
CU633967.1-204ENST00000624627 PEG3Q9GZU2 1588 aa14.67□□□□□ -0.06
CU633967.1-204ENST00000624627 NCAPD3P42695 1498 aa14.66□□□□□ -0.06
CU633967.1-204ENST00000624627 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
CU633967.1-204ENST00000624627 SUPT5HO00267 1087 aaKnown RBP14.66□□□□□ -0.06
CU633967.1-204ENST00000624627 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
CU633967.1-204ENST00000624627 ABCB7O75027 752 aa14.59□□□□□ -0.07
CU633967.1-204ENST00000624627 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
CU633967.1-204ENST00000624627 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
CU633967.1-204ENST00000624627 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
CU633967.1-204ENST00000624627 APLP2Q06481 763 aa14.51□□□□□ -0.09
CU633967.1-204ENST00000624627 TOP2AP11388 1531 aaKnown RBP14.5□□□□□ -0.09
CU633967.1-204ENST00000624627 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
CU633967.1-204ENST00000624627 CHRDL2Q6WN34 429 aa14.45□□□□□ -0.1
CU633967.1-204ENST00000624627 CCDC88BA6NC98 1476 aa14.39□□□□□ -0.11
CU633967.1-204ENST00000624627 SP7Q8TDD2 431 aaPredicted RBP14.36□□□□□ -0.11
CU633967.1-204ENST00000624627 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
CU633967.1-204ENST00000624627 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
CU633967.1-204ENST00000624627 HNRNPUL2Q1KMD3 747 aaKnown RBP14.3□□□□□ -0.12
CU633967.1-204ENST00000624627 NESP48681 1621 aa14.28□□□□□ -0.12
CU633967.1-204ENST00000624627 CADPSQ9ULU8 1353 aa14.27□□□□□ -0.13
CU633967.1-204ENST00000624627 CFTRP13569 1480 aa14.23□□□□□ -0.13
CU633967.1-204ENST00000624627 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
CU633967.1-204ENST00000624627 SAMD1Q6SPF0 538 aaPredicted RBP14.18□□□□□ -0.14
CU633967.1-204ENST00000624627 PDS5BQ9NTI5 1447 aa14.11□□□□□ -0.15
CU633967.1-204ENST00000624627 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
CU633967.1-204ENST00000624627 ERCC6Q03468 1493 aa14.07□□□□□ -0.16
CU633967.1-204ENST00000624627 KIF21AQ7Z4S6 1674 aa14.04□□□□□ -0.16
CU633967.1-204ENST00000624627 PRDM2Q13029 1718 aa14.02□□□□□ -0.16
CU633967.1-204ENST00000624627 CEP164Q9UPV0 1460 aa14.02□□□□□ -0.17
CU633967.1-204ENST00000624627 POLA2Q14181 598 aa14□□□□□ -0.17
CU633967.1-204ENST00000624627 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
CU633967.1-204ENST00000624627 MRC2Q9UBG0 1479 aa13.94□□□□□ -0.18
CU633967.1-204ENST00000624627 ABCC8Q09428 1581 aa13.94□□□□□ -0.18
CU633967.1-204ENST00000624627 URB2Q14146 1524 aaKnown RBP13.94□□□□□ -0.18
CU633967.1-204ENST00000624627 PIP4P2Q8N4L2 257 aa13.93□□□□□ -0.18
CU633967.1-204ENST00000624627 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
CU633967.1-204ENST00000624627 WRNQ14191 1432 aaPredicted RBP eCLIP13.9□□□□□ -0.18
CU633967.1-204ENST00000624627 CUX1P39880 1505 aa13.89□□□□□ -0.19
CU633967.1-204ENST00000624627 WDR62O43379 1518 aa13.89□□□□□ -0.19
CU633967.1-204ENST00000624627 TOPBP1Q92547 1522 aa13.89□□□□□ -0.19
CU633967.1-204ENST00000624627 HAX1O00165 279 aa13.88□□□□□ -0.19
CU633967.1-204ENST00000624627 DNMBPQ6XZF7 1577 aa13.86□□□□□ -0.19
CU633967.1-204ENST00000624627 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
CU633967.1-204ENST00000624627 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
CU633967.1-204ENST00000624627 KCNA4P22459 653 aa13.81□□□□□ -0.2
CU633967.1-204ENST00000624627 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms