RNA–Protein interactions for RNA: ENST00000623351.1

AL139220.2-201, humanhuman

TSL 3

Gene AL139220.2, Length 482 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139220.2-201ENST00000623351 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
AL139220.2-201ENST00000623351 CHIC1Q5VXU3 224 aa24.5■■□□□ 1.51
AL139220.2-201ENST00000623351 SENP3Q9H4L4 574 aaPredicted RBP21.99■■□□□ 1.11
AL139220.2-201ENST00000623351 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
AL139220.2-201ENST00000623351 NISCHQ9Y2I1 1504 aa20.78■□□□□ 0.92
AL139220.2-201ENST00000623351 FOXD1Q16676 465 aa20.42■□□□□ 0.86
AL139220.2-201ENST00000623351 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
AL139220.2-201ENST00000623351 PIAS4Q8N2W9 510 aaPredicted RBP19.19■□□□□ 0.66
AL139220.2-201ENST00000623351 MSH5O43196 834 aa19.16■□□□□ 0.66
AL139220.2-201ENST00000623351 ADRA2BP18089 450 aa19.12■□□□□ 0.65
AL139220.2-201ENST00000623351 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
AL139220.2-201ENST00000623351 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
AL139220.2-201ENST00000623351 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
AL139220.2-201ENST00000623351 ABCC9O60706 1549 aa18.28■□□□□ 0.52
AL139220.2-201ENST00000623351 DNAJC5BQ9UF47 199 aa17.87■□□□□ 0.45
AL139220.2-201ENST00000623351 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
AL139220.2-201ENST00000623351 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
AL139220.2-201ENST00000623351 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
AL139220.2-201ENST00000623351 NACADO15069 1562 aa17.43■□□□□ 0.38
AL139220.2-201ENST00000623351 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
AL139220.2-201ENST00000623351 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
AL139220.2-201ENST00000623351 ZCCHC6Q5VYS8 1495 aaKnown RBP17.32■□□□□ 0.36
AL139220.2-201ENST00000623351 DCAF1Q9Y4B6 1507 aa17.27■□□□□ 0.36
AL139220.2-201ENST00000623351 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
AL139220.2-201ENST00000623351 UNC13AQ9UPW8 1703 aa17.21■□□□□ 0.35
AL139220.2-201ENST00000623351 DCAF8L2P0C7V8 631 aa17.1■□□□□ 0.33
AL139220.2-201ENST00000623351 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
AL139220.2-201ENST00000623351 BICRAQ9NZM4 1560 aa16.98■□□□□ 0.31
AL139220.2-201ENST00000623351 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
AL139220.2-201ENST00000623351 DCAF8L1A6NGE4 600 aa16.83■□□□□ 0.28
AL139220.2-201ENST00000623351 SCRIBQ14160 1630 aa16.82■□□□□ 0.28
AL139220.2-201ENST00000623351 DNAJC5Q9H3Z4 198 aa16.82■□□□□ 0.28
AL139220.2-201ENST00000623351 SHROOM4Q9ULL8 1493 aa16.8■□□□□ 0.28
AL139220.2-201ENST00000623351 HOXD11P31277 338 aaPredicted RBP16.77■□□□□ 0.28
AL139220.2-201ENST00000623351 RNF216Q9NWF9 866 aaPredicted RBP16.71■□□□□ 0.27
AL139220.2-201ENST00000623351 NCBP3Q53F19 620 aaKnown RBP16.67■□□□□ 0.26
AL139220.2-201ENST00000623351 CECR2Q9BXF3 1484 aa16.52■□□□□ 0.23
AL139220.2-201ENST00000623351 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
AL139220.2-201ENST00000623351 CC2D2AQ9P2K1 1620 aa16.42■□□□□ 0.22
AL139220.2-201ENST00000623351 CACNB1Q02641 598 aaPredicted RBP16.42■□□□□ 0.22
AL139220.2-201ENST00000623351 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
AL139220.2-201ENST00000623351 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
AL139220.2-201ENST00000623351 SMARCA4P51532 1647 aa16.16■□□□□ 0.18
AL139220.2-201ENST00000623351 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
AL139220.2-201ENST00000623351 BAZ1AQ9NRL2 1556 aaPredicted RBP16.11■□□□□ 0.17
AL139220.2-201ENST00000623351 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.1■□□□□ 0.17
AL139220.2-201ENST00000623351 KCNA4P22459 653 aa16.09■□□□□ 0.17
AL139220.2-201ENST00000623351 PEG3Q9GZU2 1588 aa16.07■□□□□ 0.16
AL139220.2-201ENST00000623351 NCAPD3P42695 1498 aa16.06■□□□□ 0.16
AL139220.2-201ENST00000623351 SMARCA2P51531 1590 aa16.04■□□□□ 0.16
AL139220.2-201ENST00000623351 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
AL139220.2-201ENST00000623351 HMGXB3Q12766 1538 aa16.03■□□□□ 0.16
AL139220.2-201ENST00000623351 MROH2BQ7Z745 1585 aa16■□□□□ 0.15
AL139220.2-201ENST00000623351 CUX2O14529 1486 aa15.96■□□□□ 0.14
AL139220.2-201ENST00000623351 BAZ1BQ9UIG0 1483 aaKnown RBP15.87■□□□□ 0.13
AL139220.2-201ENST00000623351 WIZO95785 1651 aa15.86■□□□□ 0.13
AL139220.2-201ENST00000623351 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
AL139220.2-201ENST00000623351 ERCC6Q03468 1493 aa15.78■□□□□ 0.12
AL139220.2-201ENST00000623351 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
AL139220.2-201ENST00000623351 LAMC3Q9Y6N6 1575 aa15.67■□□□□ 0.1
AL139220.2-201ENST00000623351 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
AL139220.2-201ENST00000623351 TOP2AP11388 1531 aaKnown RBP15.67■□□□□ 0.1
AL139220.2-201ENST00000623351 NESP48681 1621 aa15.64■□□□□ 0.09
AL139220.2-201ENST00000623351 KIF21AQ7Z4S6 1674 aa15.57■□□□□ 0.08
AL139220.2-201ENST00000623351 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
AL139220.2-201ENST00000623351 CADPSQ9ULU8 1353 aa15.54■□□□□ 0.08
AL139220.2-201ENST00000623351 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
AL139220.2-201ENST00000623351 THOC2Q8NI27 1593 aaKnown RBP15.52■□□□□ 0.07
AL139220.2-201ENST00000623351 CAPN15O75808 1086 aa15.49■□□□□ 0.07
AL139220.2-201ENST00000623351 CFTRP13569 1480 aa15.48■□□□□ 0.07
AL139220.2-201ENST00000623351 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
AL139220.2-201ENST00000623351 SPINK5Q9NQ38 1064 aaPredicted RBP15.44■□□□□ 0.06
AL139220.2-201ENST00000623351 CCDC88BA6NC98 1476 aa15.44■□□□□ 0.06
AL139220.2-201ENST00000623351 APLP2Q06481 763 aa15.39■□□□□ 0.05
AL139220.2-201ENST00000623351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.38■□□□□ 0.05
AL139220.2-201ENST00000623351 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
AL139220.2-201ENST00000623351 WDR62O43379 1518 aa15.36■□□□□ 0.05
AL139220.2-201ENST00000623351 FANCD2Q9BXW9 1451 aa15.35■□□□□ 0.05
AL139220.2-201ENST00000623351 MRC2Q9UBG0 1479 aa15.34■□□□□ 0.05
AL139220.2-201ENST00000623351 CEP164Q9UPV0 1460 aa15.34■□□□□ 0.05
AL139220.2-201ENST00000623351 DSG3P32926 999 aa15.29■□□□□ 0.04
AL139220.2-201ENST00000623351 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
AL139220.2-201ENST00000623351 SAMD1Q6SPF0 538 aaPredicted RBP15.26■□□□□ 0.03
AL139220.2-201ENST00000623351 SLC4A1APQ9BWU0 796 aaKnown RBP15.26■□□□□ 0.03
AL139220.2-201ENST00000623351 URB2Q14146 1524 aaKnown RBP15.24■□□□□ 0.03
AL139220.2-201ENST00000623351 ZNF219Q9P2Y4 722 aaPredicted RBP15.23■□□□□ 0.03
AL139220.2-201ENST00000623351 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
AL139220.2-201ENST00000623351 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
AL139220.2-201ENST00000623351 DNMBPQ6XZF7 1577 aa15.15■□□□□ 0.02
AL139220.2-201ENST00000623351 SUPT5HO00267 1087 aaKnown RBP15.14■□□□□ 0.01
AL139220.2-201ENST00000623351 ABCC8Q09428 1581 aa15.14■□□□□ 0.01
AL139220.2-201ENST00000623351 TOPBP1Q92547 1522 aa15.13■□□□□ 0.01
AL139220.2-201ENST00000623351 ABCB7O75027 752 aa15.11■□□□□ 0.01
AL139220.2-201ENST00000623351 TARBP1Q13395 1621 aaKnown RBP15.05■□□□□ -0
AL139220.2-201ENST00000623351 IFT140Q96RY7 1462 aa15.03■□□□□ -0
AL139220.2-201ENST00000623351 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
AL139220.2-201ENST00000623351 CUX1P39880 1505 aa15.02□□□□□ -0.01
AL139220.2-201ENST00000623351 POLA1P09884 1462 aaPredicted RBP15.01□□□□□ -0.01
AL139220.2-201ENST00000623351 WDR97A6NE52 1622 aa14.97□□□□□ -0.01
AL139220.2-201ENST00000623351 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms