RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-223ENST00000619193 AEBP2Q6ZN18 517 aaPredicted RBP14.32□□□□□ -0.12
RDM1-223ENST00000619193 CHIC1Q5VXU3 224 aa13.85□□□□□ -0.19
RDM1-223ENST00000619193 NISCHQ9Y2I1 1504 aa12.53□□□□□ -0.4
RDM1-223ENST00000619193 SENP3Q9H4L4 574 aaPredicted RBP12.18□□□□□ -0.46
RDM1-223ENST00000619193 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.46
RDM1-223ENST00000619193 ABCC9O60706 1549 aa11.86□□□□□ -0.51
RDM1-223ENST00000619193 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
RDM1-223ENST00000619193 FOXD1Q16676 465 aa11.31□□□□□ -0.6
RDM1-223ENST00000619193 DNAJC5Q9H3Z4 198 aa11.29□□□□□ -0.6
RDM1-223ENST00000619193 PLPPR3Q6T4P5 718 aa11.17□□□□□ -0.62
RDM1-223ENST00000619193 CCDC180Q9P1Z9 1646 aa11.04□□□□□ -0.64
RDM1-223ENST00000619193 PABPN1Q86U42 306 aaKnown RBP eCLIP10.91□□□□□ -0.66
RDM1-223ENST00000619193 RB1CC1Q8TDY2 1594 aa10.85□□□□□ -0.67
RDM1-223ENST00000619193 PPP6R1Q9UPN7 881 aa10.76□□□□□ -0.69
RDM1-223ENST00000619193 UNC13AQ9UPW8 1703 aa10.75□□□□□ -0.69
RDM1-223ENST00000619193 ADRA2BP18089 450 aa10.74□□□□□ -0.69
RDM1-223ENST00000619193 CECR2Q9BXF3 1484 aa10.71□□□□□ -0.69
RDM1-223ENST00000619193 BICRAQ9NZM4 1560 aa10.69□□□□□ -0.7
RDM1-223ENST00000619193 CC2D2AQ9P2K1 1620 aa10.66□□□□□ -0.7
RDM1-223ENST00000619193 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
RDM1-223ENST00000619193 PIAS4Q8N2W9 510 aaPredicted RBP10.62□□□□□ -0.71
RDM1-223ENST00000619193 NACADO15069 1562 aa10.57□□□□□ -0.72
RDM1-223ENST00000619193 TRIM41Q8WV44 630 aa10.55□□□□□ -0.72
RDM1-223ENST00000619193 MSH5O43196 834 aa10.5□□□□□ -0.73
RDM1-223ENST00000619193 SHROOM4Q9ULL8 1493 aa10.48□□□□□ -0.73
RDM1-223ENST00000619193 EIF4G1Q04637 1599 aaKnown RBP10.43□□□□□ -0.74
RDM1-223ENST00000619193 CUX2O14529 1486 aa10.42□□□□□ -0.74
RDM1-223ENST00000619193 DCAF8L2P0C7V8 631 aa10.38□□□□□ -0.75
RDM1-223ENST00000619193 DCAF1Q9Y4B6 1507 aa10.38□□□□□ -0.75
RDM1-223ENST00000619193 MYO15BQ96JP2 1530 aa10.28□□□□□ -0.76
RDM1-223ENST00000619193 SUPT5HO00267 1087 aaKnown RBP10.23□□□□□ -0.77
RDM1-223ENST00000619193 ERCC6Q03468 1493 aa10.22□□□□□ -0.77
RDM1-223ENST00000619193 SCRIBQ14160 1630 aa10.11□□□□□ -0.79
RDM1-223ENST00000619193 THOC2Q8NI27 1593 aaKnown RBP10.05□□□□□ -0.8
RDM1-223ENST00000619193 NESP48681 1621 aa10.01□□□□□ -0.81
RDM1-223ENST00000619193 HRCP23327 699 aa9.95□□□□□ -0.82
RDM1-223ENST00000619193 SMARCA2P51531 1590 aa9.92□□□□□ -0.82
RDM1-223ENST00000619193 RSF1Q96T23 1441 aaPredicted RBP9.92□□□□□ -0.82
RDM1-223ENST00000619193 BAZ1AQ9NRL2 1556 aaPredicted RBP9.9□□□□□ -0.82
RDM1-223ENST00000619193 RIMBP3CA6NJZ7 1639 aa9.89□□□□□ -0.83
RDM1-223ENST00000619193 RIMBP3BA6NNM3 1639 aa9.89□□□□□ -0.83
RDM1-223ENST00000619193 RIMBP3Q9UFD9 1639 aa9.89□□□□□ -0.83
RDM1-223ENST00000619193 ILDR1Q86SU0 546 aaPredicted RBP9.86□□□□□ -0.83
RDM1-223ENST00000619193 KIF21AQ7Z4S6 1674 aa9.85□□□□□ -0.83
RDM1-223ENST00000619193 SCAF1Q9H7N4 1312 aaKnown RBP9.82□□□□□ -0.84
RDM1-223ENST00000619193 PPP4R3CPQ6ZMV5 832 aa9.81□□□□□ -0.84
RDM1-223ENST00000619193 POTEDQ86YR6 584 aa9.81□□□□□ -0.84
RDM1-223ENST00000619193 TRHP20396 242 aaPredicted RBP9.79□□□□□ -0.84
RDM1-223ENST00000619193 LOC105371045A0A1W2PR82 267 aa9.78□□□□□ -0.84
RDM1-223ENST00000619193 MAPK8IP2Q13387 824 aaPredicted RBP9.78□□□□□ -0.84
RDM1-223ENST00000619193 NCAPD3P42695 1498 aa9.78□□□□□ -0.84
RDM1-223ENST00000619193 OSCARQ8IYS5 282 aa9.77□□□□□ -0.85
RDM1-223ENST00000619193 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
RDM1-223ENST00000619193 MROH2BQ7Z745 1585 aa9.75□□□□□ -0.85
RDM1-223ENST00000619193 PCGF6Q9BYE7 350 aa9.74□□□□□ -0.85
RDM1-223ENST00000619193 DMRT2Q9Y5R5 561 aa9.7□□□□□ -0.86
RDM1-223ENST00000619193 ATAD2BQ9ULI0 1458 aa9.69□□□□□ -0.86
RDM1-223ENST00000619193 LAMC3Q9Y6N6 1575 aa9.69□□□□□ -0.86
RDM1-223ENST00000619193 PPARGC1BQ86YN6 1023 aaKnown RBP9.68□□□□□ -0.86
RDM1-223ENST00000619193 WIZO95785 1651 aa9.67□□□□□ -0.86
RDM1-223ENST00000619193 WDR62O43379 1518 aa9.67□□□□□ -0.86
RDM1-223ENST00000619193 CYB5RLQ6IPT4 315 aa9.67□□□□□ -0.86
RDM1-223ENST00000619193 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
RDM1-223ENST00000619193 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
RDM1-223ENST00000619193 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
RDM1-223ENST00000619193 TRIM26Q12899 539 aaPredicted RBP9.62□□□□□ -0.87
RDM1-223ENST00000619193 PDS5BQ9NTI5 1447 aa9.6□□□□□ -0.87
RDM1-223ENST00000619193 CNKSR2Q8WXI2 1034 aa9.58□□□□□ -0.88
RDM1-223ENST00000619193 TOP2AP11388 1531 aaKnown RBP9.56□□□□□ -0.88
RDM1-223ENST00000619193 SMARCA4P51532 1647 aa9.54□□□□□ -0.88
RDM1-223ENST00000619193 BAZ1BQ9UIG0 1483 aaKnown RBP9.53□□□□□ -0.88
RDM1-223ENST00000619193 NCBP3Q53F19 620 aaKnown RBP9.51□□□□□ -0.89
RDM1-223ENST00000619193 CCDC88BA6NC98 1476 aa9.47□□□□□ -0.89
RDM1-223ENST00000619193 CEP164Q9UPV0 1460 aa9.46□□□□□ -0.9
RDM1-223ENST00000619193 HOXD11P31277 338 aaPredicted RBP9.44□□□□□ -0.9
RDM1-223ENST00000619193 CADPSQ9ULU8 1353 aa9.44□□□□□ -0.9
RDM1-223ENST00000619193 ZNF608Q9ULD9 1512 aaPredicted RBP9.44□□□□□ -0.9
RDM1-223ENST00000619193 ABCC8Q09428 1581 aa9.44□□□□□ -0.9
RDM1-223ENST00000619193 CHD1O14646 1710 aa9.43□□□□□ -0.9
RDM1-223ENST00000619193 PEG3Q9GZU2 1588 aa9.43□□□□□ -0.9
RDM1-223ENST00000619193 WRNQ14191 1432 aaPredicted RBP eCLIP9.43□□□□□ -0.9
RDM1-223ENST00000619193 FAM9AQ8IZU1 332 aaPredicted RBP9.43□□□□□ -0.9
RDM1-223ENST00000619193 RNF216Q9NWF9 866 aaPredicted RBP9.43□□□□□ -0.9
RDM1-223ENST00000619193 KCNA4P22459 653 aa9.42□□□□□ -0.9
RDM1-223ENST00000619193 URB2Q14146 1524 aaKnown RBP9.41□□□□□ -0.9
RDM1-223ENST00000619193 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
RDM1-223ENST00000619193 FANCD2Q9BXW9 1451 aa9.39□□□□□ -0.91
RDM1-223ENST00000619193 NPM3O75607 178 aaKnown RBP9.38□□□□□ -0.91
RDM1-223ENST00000619193 KDM4FA0A1W2PPD8 638 aa9.37□□□□□ -0.91
RDM1-223ENST00000619193 SOGA1O94964 1423 aa9.35□□□□□ -0.91
RDM1-223ENST00000619193 RUSC2Q8N2Y8 1516 aa9.35□□□□□ -0.91
RDM1-223ENST00000619193 TNIKQ9UKE5 1360 aa9.34□□□□□ -0.91
RDM1-223ENST00000619193 EIF4G3O43432 1585 aaKnown RBP9.33□□□□□ -0.92
RDM1-223ENST00000619193 EEA1Q15075 1411 aa9.32□□□□□ -0.92
RDM1-223ENST00000619193 CEP162Q5TB80 1403 aa9.31□□□□□ -0.92
RDM1-223ENST00000619193 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
RDM1-223ENST00000619193 LMTK3Q96Q04 1460 aa9.28□□□□□ -0.92
RDM1-223ENST00000619193 KIF21BO75037 1637 aa9.28□□□□□ -0.92
RDM1-223ENST00000619193 HECW2Q9P2P5 1572 aa9.28□□□□□ -0.92
RDM1-223ENST00000619193 CLASP1Q7Z460 1538 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms