RNA–Protein interactions for RNA: ENST00000615375.1

PCDH17-204, Transcript of protocadherin 17, humanhuman

TSL 4

Gene PCDH17, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-204ENST00000615375 AEBP2Q6ZN18 517 aaPredicted RBP26.48■■□□□ 1.83
PCDH17-204ENST00000615375 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
PCDH17-204ENST00000615375 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
PCDH17-204ENST00000615375 SENP3Q9H4L4 574 aaPredicted RBP22.56■■□□□ 1.2
PCDH17-204ENST00000615375 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
PCDH17-204ENST00000615375 FOXD1Q16676 465 aa20.91■□□□□ 0.94
PCDH17-204ENST00000615375 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
PCDH17-204ENST00000615375 ADRA2BP18089 450 aa19.99■□□□□ 0.79
PCDH17-204ENST00000615375 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
PCDH17-204ENST00000615375 ABCC9O60706 1549 aa19.87■□□□□ 0.77
PCDH17-204ENST00000615375 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
PCDH17-204ENST00000615375 PIAS4Q8N2W9 510 aaPredicted RBP19.74■□□□□ 0.75
PCDH17-204ENST00000615375 MSH5O43196 834 aa19.39■□□□□ 0.69
PCDH17-204ENST00000615375 RB1CC1Q8TDY2 1594 aa18.88■□□□□ 0.61
PCDH17-204ENST00000615375 DNAJC5BQ9UF47 199 aa18.79■□□□□ 0.6
PCDH17-204ENST00000615375 NACADO15069 1562 aa18.66■□□□□ 0.58
PCDH17-204ENST00000615375 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
PCDH17-204ENST00000615375 PPP4R3CPQ6ZMV5 832 aa18.37■□□□□ 0.53
PCDH17-204ENST00000615375 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
PCDH17-204ENST00000615375 SCAF1Q9H7N4 1312 aaKnown RBP18.35■□□□□ 0.53
PCDH17-204ENST00000615375 DCAF8L2P0C7V8 631 aa18.34■□□□□ 0.53
PCDH17-204ENST00000615375 BICRAQ9NZM4 1560 aa18.28■□□□□ 0.52
PCDH17-204ENST00000615375 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
PCDH17-204ENST00000615375 MAPK8IP2Q13387 824 aaPredicted RBP18.17■□□□□ 0.5
PCDH17-204ENST00000615375 SHROOM4Q9ULL8 1493 aa18.07■□□□□ 0.48
PCDH17-204ENST00000615375 CC2D2AQ9P2K1 1620 aa18.01■□□□□ 0.47
PCDH17-204ENST00000615375 DMRT2Q9Y5R5 561 aa17.96■□□□□ 0.47
PCDH17-204ENST00000615375 CECR2Q9BXF3 1484 aa17.95■□□□□ 0.46
PCDH17-204ENST00000615375 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
PCDH17-204ENST00000615375 ZCCHC6Q5VYS8 1495 aaKnown RBP17.92■□□□□ 0.46
PCDH17-204ENST00000615375 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
PCDH17-204ENST00000615375 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
PCDH17-204ENST00000615375 EIF4G1Q04637 1599 aaKnown RBP17.88■□□□□ 0.45
PCDH17-204ENST00000615375 SCRIBQ14160 1630 aa17.88■□□□□ 0.45
PCDH17-204ENST00000615375 POTEDQ86YR6 584 aa17.87■□□□□ 0.45
PCDH17-204ENST00000615375 KCNA4P22459 653 aa17.77■□□□□ 0.44
PCDH17-204ENST00000615375 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
PCDH17-204ENST00000615375 NPM3O75607 178 aaKnown RBP17.57■□□□□ 0.4
PCDH17-204ENST00000615375 DNAJC5Q9H3Z4 198 aa17.54■□□□□ 0.4
PCDH17-204ENST00000615375 HOXD11P31277 338 aaPredicted RBP17.52■□□□□ 0.4
PCDH17-204ENST00000615375 CUX2O14529 1486 aa17.31■□□□□ 0.36
PCDH17-204ENST00000615375 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
PCDH17-204ENST00000615375 ERCC6Q03468 1493 aa17.23■□□□□ 0.35
PCDH17-204ENST00000615375 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
PCDH17-204ENST00000615375 SMARCA2P51531 1590 aa17.07■□□□□ 0.32
PCDH17-204ENST00000615375 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
PCDH17-204ENST00000615375 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
PCDH17-204ENST00000615375 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
PCDH17-204ENST00000615375 NESP48681 1621 aa16.97■□□□□ 0.31
PCDH17-204ENST00000615375 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
PCDH17-204ENST00000615375 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
PCDH17-204ENST00000615375 BAZ1BQ9UIG0 1483 aaKnown RBP16.92■□□□□ 0.3
PCDH17-204ENST00000615375 BAZ1AQ9NRL2 1556 aaPredicted RBP16.9■□□□□ 0.3
PCDH17-204ENST00000615375 LAMC3Q9Y6N6 1575 aa16.9■□□□□ 0.3
PCDH17-204ENST00000615375 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
PCDH17-204ENST00000615375 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
PCDH17-204ENST00000615375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.76■□□□□ 0.27
PCDH17-204ENST00000615375 PDS5BQ9NTI5 1447 aa16.76■□□□□ 0.27
PCDH17-204ENST00000615375 MROH2BQ7Z745 1585 aa16.68■□□□□ 0.26
PCDH17-204ENST00000615375 TRIM41Q8WV44 630 aa16.66■□□□□ 0.26
PCDH17-204ENST00000615375 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
PCDH17-204ENST00000615375 WDR62O43379 1518 aa16.63■□□□□ 0.25
PCDH17-204ENST00000615375 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
PCDH17-204ENST00000615375 CADPSQ9ULU8 1353 aa16.6■□□□□ 0.25
PCDH17-204ENST00000615375 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
PCDH17-204ENST00000615375 WIZO95785 1651 aa16.53■□□□□ 0.24
PCDH17-204ENST00000615375 CEP164Q9UPV0 1460 aa16.53■□□□□ 0.24
PCDH17-204ENST00000615375 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
PCDH17-204ENST00000615375 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
PCDH17-204ENST00000615375 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
PCDH17-204ENST00000615375 U3KPZ7 1027 aaPredicted RBP16.42■□□□□ 0.22
PCDH17-204ENST00000615375 C1QBPQ07021 282 aaKnown RBP16.39■□□□□ 0.21
PCDH17-204ENST00000615375 OSCARQ8IYS5 282 aa16.38■□□□□ 0.21
PCDH17-204ENST00000615375 CFTRP13569 1480 aa16.36■□□□□ 0.21
PCDH17-204ENST00000615375 URB2Q14146 1524 aaKnown RBP16.32■□□□□ 0.2
PCDH17-204ENST00000615375 RIMBP3CA6NJZ7 1639 aa16.31■□□□□ 0.2
PCDH17-204ENST00000615375 RIMBP3BA6NNM3 1639 aa16.31■□□□□ 0.2
PCDH17-204ENST00000615375 RIMBP3Q9UFD9 1639 aa16.31■□□□□ 0.2
PCDH17-204ENST00000615375 ZBTB22O15209 634 aa16.31■□□□□ 0.2
PCDH17-204ENST00000615375 EHMT2Q96KQ7 1210 aa16.3■□□□□ 0.2
PCDH17-204ENST00000615375 TOP2AP11388 1531 aaKnown RBP16.29■□□□□ 0.2
PCDH17-204ENST00000615375 CACNB1Q02641 598 aaPredicted RBP16.29■□□□□ 0.2
PCDH17-204ENST00000615375 MYCNP04198 464 aaPredicted RBP16.28■□□□□ 0.2
PCDH17-204ENST00000615375 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.23■□□□□ 0.19
PCDH17-204ENST00000615375 HNRNPUL2Q1KMD3 747 aaKnown RBP16.23■□□□□ 0.19
PCDH17-204ENST00000615375 RSF1Q96T23 1441 aaPredicted RBP16.19■□□□□ 0.18
PCDH17-204ENST00000615375 ARHGEF11O15085 1522 aa16.19■□□□□ 0.18
PCDH17-204ENST00000615375 IFT140Q96RY7 1462 aa16.18■□□□□ 0.18
PCDH17-204ENST00000615375 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
PCDH17-204ENST00000615375 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
PCDH17-204ENST00000615375 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
PCDH17-204ENST00000615375 CHD1O14646 1710 aa16.14■□□□□ 0.17
PCDH17-204ENST00000615375 APLP2Q06481 763 aa16.12■□□□□ 0.17
PCDH17-204ENST00000615375 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
PCDH17-204ENST00000615375 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
PCDH17-204ENST00000615375 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
PCDH17-204ENST00000615375 DNMBPQ6XZF7 1577 aa16.07■□□□□ 0.16
PCDH17-204ENST00000615375 CCDC88BA6NC98 1476 aa16.05■□□□□ 0.16
PCDH17-204ENST00000615375 TARBP1Q13395 1621 aaKnown RBP16.03■□□□□ 0.16
PCDH17-204ENST00000615375 CAPN15O75808 1086 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 893.2 ms