RNA–Protein interactions for RNA: ENST00000615288.4

RDM1-218, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-218ENST00000615288 NISCHQ9Y2I1 1504 aa20.37■□□□□ 0.85
RDM1-218ENST00000615288 CCDC180Q9P1Z9 1646 aa17.55■□□□□ 0.4
RDM1-218ENST00000615288 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
RDM1-218ENST00000615288 DCAF1Q9Y4B6 1507 aa17.05■□□□□ 0.32
RDM1-218ENST00000615288 SHROOM4Q9ULL8 1493 aa16.87■□□□□ 0.29
RDM1-218ENST00000615288 SUPT5HO00267 1087 aaKnown RBP16.65■□□□□ 0.26
RDM1-218ENST00000615288 CHIC1Q5VXU3 224 aa16.55■□□□□ 0.24
RDM1-218ENST00000615288 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
RDM1-218ENST00000615288 ABCC9O60706 1549 aa16.47■□□□□ 0.23
RDM1-218ENST00000615288 HRCP23327 699 aa16.46■□□□□ 0.23
RDM1-218ENST00000615288 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
RDM1-218ENST00000615288 DCAF8L2P0C7V8 631 aa16.08■□□□□ 0.16
RDM1-218ENST00000615288 RSF1Q96T23 1441 aaPredicted RBP16.08■□□□□ 0.16
RDM1-218ENST00000615288 NACADO15069 1562 aa16.06■□□□□ 0.16
RDM1-218ENST00000615288 PCGF6Q9BYE7 350 aa16.02■□□□□ 0.16
RDM1-218ENST00000615288 SCRIBQ14160 1630 aa16■□□□□ 0.15
RDM1-218ENST00000615288 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
RDM1-218ENST00000615288 ZEB1P37275 1124 aaPredicted RBP15.94■□□□□ 0.14
RDM1-218ENST00000615288 BAZ1AQ9NRL2 1556 aaPredicted RBP15.82■□□□□ 0.12
RDM1-218ENST00000615288 EIF4G1Q04637 1599 aaKnown RBP15.79■□□□□ 0.12
RDM1-218ENST00000615288 LOC105371045A0A1W2PR82 267 aa15.77■□□□□ 0.12
RDM1-218ENST00000615288 TRIM41Q8WV44 630 aa15.72■□□□□ 0.11
RDM1-218ENST00000615288 MROH2BQ7Z745 1585 aa15.7■□□□□ 0.1
RDM1-218ENST00000615288 PPARGC1BQ86YN6 1023 aaKnown RBP15.65■□□□□ 0.1
RDM1-218ENST00000615288 TOP2AP11388 1531 aaKnown RBP15.62■□□□□ 0.09
RDM1-218ENST00000615288 CECR2Q9BXF3 1484 aa15.61■□□□□ 0.09
RDM1-218ENST00000615288 WIZO95785 1651 aa15.6■□□□□ 0.09
RDM1-218ENST00000615288 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
RDM1-218ENST00000615288 PELP1Q8IZL8 1130 aaKnown RBP15.55■□□□□ 0.08
RDM1-218ENST00000615288 EEA1Q15075 1411 aa15.53■□□□□ 0.08
RDM1-218ENST00000615288 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
RDM1-218ENST00000615288 SMARCA2P51531 1590 aa15.44■□□□□ 0.06
RDM1-218ENST00000615288 PEG3Q9GZU2 1588 aa15.4■□□□□ 0.06
RDM1-218ENST00000615288 TNIKQ9UKE5 1360 aa15.34■□□□□ 0.05
RDM1-218ENST00000615288 UNC13AQ9UPW8 1703 aa15.33■□□□□ 0.04
RDM1-218ENST00000615288 CCDC88BA6NC98 1476 aa15.33■□□□□ 0.04
RDM1-218ENST00000615288 CEP162Q5TB80 1403 aa15.28■□□□□ 0.04
RDM1-218ENST00000615288 FAM9AQ8IZU1 332 aaPredicted RBP15.27■□□□□ 0.04
RDM1-218ENST00000615288 KIF21BO75037 1637 aa15.26■□□□□ 0.03
RDM1-218ENST00000615288 GOLGA3Q08378 1498 aa15.26■□□□□ 0.03
RDM1-218ENST00000615288 ABCC8Q09428 1581 aa15.23■□□□□ 0.03
RDM1-218ENST00000615288 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
RDM1-218ENST00000615288 CEP164Q9UPV0 1460 aa15.18■□□□□ 0.02
RDM1-218ENST00000615288 BICRAQ9NZM4 1560 aa15.14■□□□□ 0.01
RDM1-218ENST00000615288 CCER1Q8TC90 406 aaPredicted RBP15.11■□□□□ 0.01
RDM1-218ENST00000615288 SCAF1Q9H7N4 1312 aaKnown RBP15.11■□□□□ 0.01
RDM1-218ENST00000615288 SOGA1O94964 1423 aa15.09■□□□□ 0.01
RDM1-218ENST00000615288 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
RDM1-218ENST00000615288 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
RDM1-218ENST00000615288 ACIN1Q9UKV3 1341 aaKnown RBP15.05■□□□□ -0
RDM1-218ENST00000615288 SYNJ1O43426 1573 aa15.03■□□□□ -0
RDM1-218ENST00000615288 VPS8Q8N3P4 1428 aa15.02■□□□□ -0
RDM1-218ENST00000615288 ERICH3Q5RHP9 1530 aa15.02□□□□□ -0.01
RDM1-218ENST00000615288 BIVM-ERCC5R4GMW8 1640 aa15□□□□□ -0.01
RDM1-218ENST00000615288 TOP2BQ02880 1626 aa14.99□□□□□ -0.01
RDM1-218ENST00000615288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.98□□□□□ -0.01
RDM1-218ENST00000615288 ATAD2BQ9ULI0 1458 aa14.97□□□□□ -0.01
RDM1-218ENST00000615288 DIEXFQ68CQ4 756 aaKnown RBP14.97□□□□□ -0.01
RDM1-218ENST00000615288 CLIP1P30622 1438 aa14.96□□□□□ -0.01
RDM1-218ENST00000615288 MYT1Q01538 1121 aa14.96□□□□□ -0.01
RDM1-218ENST00000615288 CLSPNQ9HAW4 1339 aa14.95□□□□□ -0.02
RDM1-218ENST00000615288 RUSC2Q8N2Y8 1516 aa14.95□□□□□ -0.02
RDM1-218ENST00000615288 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
RDM1-218ENST00000615288 ZNF316A6NFI3 1004 aaPredicted RBP14.9□□□□□ -0.02
RDM1-218ENST00000615288 UBTFP17480 764 aaKnown RBP14.87□□□□□ -0.03
RDM1-218ENST00000615288 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
RDM1-218ENST00000615288 PRXQ9BXM0 1461 aa14.84□□□□□ -0.03
RDM1-218ENST00000615288 NEUROD1Q13562 356 aa14.84□□□□□ -0.03
RDM1-218ENST00000615288 RAPGEF2Q9Y4G8 1499 aa14.82□□□□□ -0.04
RDM1-218ENST00000615288 CUX2O14529 1486 aa14.81□□□□□ -0.04
RDM1-218ENST00000615288 PRDM2Q13029 1718 aa14.78□□□□□ -0.04
RDM1-218ENST00000615288 MAP3K1Q13233 1512 aa14.76□□□□□ -0.05
RDM1-218ENST00000615288 NCAPD3P42695 1498 aa14.76□□□□□ -0.05
RDM1-218ENST00000615288 RRBP1Q9P2E9 1410 aaKnown RBP14.74□□□□□ -0.05
RDM1-218ENST00000615288 APLP2Q06481 763 aa14.73□□□□□ -0.05
RDM1-218ENST00000615288 ARAP1Q96P48 1450 aa14.73□□□□□ -0.05
RDM1-218ENST00000615288 GTF3C3Q9Y5Q9 886 aa14.72□□□□□ -0.05
RDM1-218ENST00000615288 KIF27Q86VH2 1401 aa14.69□□□□□ -0.06
RDM1-218ENST00000615288 CUX1P39880 1505 aa14.66□□□□□ -0.06
RDM1-218ENST00000615288 CFTRP13569 1480 aa14.65□□□□□ -0.06
RDM1-218ENST00000615288 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
RDM1-218ENST00000615288 PABPN1Q86U42 306 aaKnown RBP eCLIP14.59□□□□□ -0.07
RDM1-218ENST00000615288 ARHGAP35Q9NRY4 1499 aa14.56□□□□□ -0.08
RDM1-218ENST00000615288 CFAP43Q8NDM7 1665 aa14.55□□□□□ -0.08
RDM1-218ENST00000615288 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
RDM1-218ENST00000615288 TIAM1Q13009 1591 aa14.55□□□□□ -0.08
RDM1-218ENST00000615288 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
RDM1-218ENST00000615288 CCNB3Q8WWL7 1395 aa14.54□□□□□ -0.08
RDM1-218ENST00000615288 MIER1Q8N108 512 aa14.53□□□□□ -0.08
RDM1-218ENST00000615288 FHAD1B1AJZ9 1412 aa14.49□□□□□ -0.09
RDM1-218ENST00000615288 EFCAB5A4FU69 1503 aa14.48□□□□□ -0.09
RDM1-218ENST00000615288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.47□□□□□ -0.09
RDM1-218ENST00000615288 AQRO60306 1485 aaKnown RBP eCLIP14.45□□□□□ -0.11e-6■■■■□ 21.5
RDM1-218ENST00000615288 TIMELESSQ9UNS1 1208 aa14.44□□□□□ -0.1
RDM1-218ENST00000615288 CC2D2AQ9P2K1 1620 aa14.43□□□□□ -0.1
RDM1-218ENST00000615288 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
RDM1-218ENST00000615288 MAPKBP1O60336 1514 aa14.42□□□□□ -0.1
RDM1-218ENST00000615288 FYCO1Q9BQS8 1478 aa14.41□□□□□ -0.1
RDM1-218ENST00000615288 CUL7Q14999 1698 aa14.41□□□□□ -0.1
RDM1-218ENST00000615288 IGF1RP08069 1367 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms