RNA–Protein interactions for RNA: ENST00000607742.5

SERAC1-207, Transcript of serine active site containing 1, humanhuman

TSL 1 (best)

Gene SERAC1, Length 5,155 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERAC1-207ENST00000607742 NISCHQ9Y2I1 1504 aa11.66□□□□□ -0.54
SERAC1-207ENST00000607742 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
SERAC1-207ENST00000607742 ZCCHC6Q5VYS8 1495 aaKnown RBP9.86□□□□□ -0.83
SERAC1-207ENST00000607742 CCDC180Q9P1Z9 1646 aa9.79□□□□□ -0.84
SERAC1-207ENST00000607742 SUPT5HO00267 1087 aaKnown RBP9.73□□□□□ -0.85
SERAC1-207ENST00000607742 DCAF8L2P0C7V8 631 aa9.67□□□□□ -0.86
SERAC1-207ENST00000607742 MYO15BQ96JP2 1530 aa9.66□□□□□ -0.86
SERAC1-207ENST00000607742 MYT1Q01538 1121 aa9.62□□□□□ -0.87
SERAC1-207ENST00000607742 SLC24A1O60721 1099 aa9.51□□□□□ -0.89
SERAC1-207ENST00000607742 CHIC1Q5VXU3 224 aa9.46□□□□□ -0.89
SERAC1-207ENST00000607742 PELP1Q8IZL8 1130 aaKnown RBP9.45□□□□□ -0.9
SERAC1-207ENST00000607742 DCAF1Q9Y4B6 1507 aa9.41□□□□□ -0.9
SERAC1-207ENST00000607742 SCRIBQ14160 1630 aa9.38□□□□□ -0.91
SERAC1-207ENST00000607742 LOC105371045A0A1W2PR82 267 aa9.33□□□□□ -0.92
SERAC1-207ENST00000607742 ABCC9O60706 1549 aa9.32□□□□□ -0.92
SERAC1-207ENST00000607742 CECR2Q9BXF3 1484 aa9.29□□□□□ -0.92
SERAC1-207ENST00000607742 RSF1Q96T23 1441 aaPredicted RBP9.27□□□□□ -0.93
SERAC1-207ENST00000607742 RB1CC1Q8TDY2 1594 aa9.25□□□□□ -0.93
SERAC1-207ENST00000607742 ERICH6Q7L0X2 663 aa9.21□□□□□ -0.93
SERAC1-207ENST00000607742 MROH2BQ7Z745 1585 aa9.19□□□□□ -0.94
SERAC1-207ENST00000607742 WIZO95785 1651 aa9.17□□□□□ -0.94
SERAC1-207ENST00000607742 UNC13AQ9UPW8 1703 aa9.13□□□□□ -0.95
SERAC1-207ENST00000607742 EHMT2Q96KQ7 1210 aa9.13□□□□□ -0.95
SERAC1-207ENST00000607742 PPARGC1BQ86YN6 1023 aaKnown RBP9.12□□□□□ -0.95
SERAC1-207ENST00000607742 TTBK1Q5TCY1 1321 aaPredicted RBP9.09□□□□□ -0.95
SERAC1-207ENST00000607742 PCGF6Q9BYE7 350 aa9.08□□□□□ -0.96
SERAC1-207ENST00000607742 EIF4G1Q04637 1599 aaKnown RBP9.03□□□□□ -0.96
SERAC1-207ENST00000607742 NACADO15069 1562 aa9.03□□□□□ -0.96
SERAC1-207ENST00000607742 FAM9AQ8IZU1 332 aaPredicted RBP9.03□□□□□ -0.96
SERAC1-207ENST00000607742 BICRAQ9NZM4 1560 aa8.98□□□□□ -0.97
SERAC1-207ENST00000607742 PABPN1Q86U42 306 aaKnown RBP eCLIP8.98□□□□□ -0.97
SERAC1-207ENST00000607742 HRCP23327 699 aa8.97□□□□□ -0.97
SERAC1-207ENST00000607742 ABCC8Q09428 1581 aa8.96□□□□□ -0.98
SERAC1-207ENST00000607742 BAZ1AQ9NRL2 1556 aaPredicted RBP8.92□□□□□ -0.98
SERAC1-207ENST00000607742 RUSC2Q8N2Y8 1516 aa8.91□□□□□ -0.98
SERAC1-207ENST00000607742 TRIM41Q8WV44 630 aa8.91□□□□□ -0.98
SERAC1-207ENST00000607742 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.98
SERAC1-207ENST00000607742 RANGAP1P46060 587 aaPredicted RBP8.9□□□□□ -0.98
SERAC1-207ENST00000607742 SMARCA4P51532 1647 aa8.9□□□□□ -0.99
SERAC1-207ENST00000607742 SMARCA2P51531 1590 aa8.88□□□□□ -0.99
SERAC1-207ENST00000607742 SOGA1O94964 1423 aa8.84□□□□□ -0.99
SERAC1-207ENST00000607742 TOP2AP11388 1531 aaKnown RBP8.81□□□□□ -1
SERAC1-207ENST00000607742 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
SERAC1-207ENST00000607742 SYNJ1O43426 1573 aa8.73□□□□□ -1.01
SERAC1-207ENST00000607742 PEG3Q9GZU2 1588 aa8.69□□□□□ -1.02
SERAC1-207ENST00000607742 ATAD2BQ9ULI0 1458 aa8.68□□□□□ -1.02
SERAC1-207ENST00000607742 DAXXQ9UER7 740 aaPredicted RBP8.67□□□□□ -1.02
SERAC1-207ENST00000607742 EIF5BO60841 1220 aaKnown RBP8.63□□□□□ -1.03
SERAC1-207ENST00000607742 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.63□□□□□ -1.03
SERAC1-207ENST00000607742 PRKCSHP14314 528 aaPredicted RBP8.62□□□□□ -1.03
SERAC1-207ENST00000607742 DNAJC5BQ9UF47 199 aa8.62□□□□□ -1.03
SERAC1-207ENST00000607742 CEP162Q5TB80 1403 aa8.61□□□□□ -1.03
SERAC1-207ENST00000607742 RAPGEF2Q9Y4G8 1499 aa8.58□□□□□ -1.04
SERAC1-207ENST00000607742 WRNQ14191 1432 aaPredicted RBP eCLIP8.58□□□□□ -1.04
SERAC1-207ENST00000607742 CSRNP3Q8WYN3 585 aa8.55□□□□□ -1.04
SERAC1-207ENST00000607742 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
SERAC1-207ENST00000607742 CUX1P39880 1505 aa8.53□□□□□ -1.04
SERAC1-207ENST00000607742 TNIKQ9UKE5 1360 aa8.51□□□□□ -1.05
SERAC1-207ENST00000607742 TOP2BQ02880 1626 aa8.49□□□□□ -1.05
SERAC1-207ENST00000607742 UBTFP17480 764 aaKnown RBP8.47□□□□□ -1.05
SERAC1-207ENST00000607742 BIVM-ERCC5R4GMW8 1640 aa8.46□□□□□ -1.06
SERAC1-207ENST00000607742 KIF21BO75037 1637 aa8.46□□□□□ -1.06
SERAC1-207ENST00000607742 KANK4Q5T7N3 995 aaPredicted RBP8.45□□□□□ -1.06
SERAC1-207ENST00000607742 CLIP1P30622 1438 aa8.45□□□□□ -1.06
SERAC1-207ENST00000607742 NCAPD3P42695 1498 aa8.45□□□□□ -1.06
SERAC1-207ENST00000607742 GOLGA3Q08378 1498 aa8.43□□□□□ -1.06
SERAC1-207ENST00000607742 ARAP1Q96P48 1450 aa8.43□□□□□ -1.06
SERAC1-207ENST00000607742 NESP48681 1621 aa8.42□□□□□ -1.06
SERAC1-207ENST00000607742 PRXQ9BXM0 1461 aa8.42□□□□□ -1.06
SERAC1-207ENST00000607742 CFTRP13569 1480 aa8.41□□□□□ -1.06
SERAC1-207ENST00000607742 PLPPR3Q6T4P5 718 aa8.41□□□□□ -1.06
SERAC1-207ENST00000607742 HMGXB3Q12766 1538 aa8.4□□□□□ -1.07
SERAC1-207ENST00000607742 SCAF1Q9H7N4 1312 aaKnown RBP8.4□□□□□ -1.07
SERAC1-207ENST00000607742 RTN4Q9NQC3 1192 aaKnown RBP8.4□□□□□ -1.07
SERAC1-207ENST00000607742 CC2D2AQ9P2K1 1620 aa8.38□□□□□ -1.07
SERAC1-207ENST00000607742 CEP164Q9UPV0 1460 aa8.38□□□□□ -1.07
SERAC1-207ENST00000607742 HNRNPUL2Q1KMD3 747 aaKnown RBP8.37□□□□□ -1.07
SERAC1-207ENST00000607742 CCER1Q8TC90 406 aaPredicted RBP8.35□□□□□ -1.07
SERAC1-207ENST00000607742 EEA1Q15075 1411 aa8.35□□□□□ -1.07
SERAC1-207ENST00000607742 VPS8Q8N3P4 1428 aa8.35□□□□□ -1.07
SERAC1-207ENST00000607742 ARHGAP35Q9NRY4 1499 aa8.34□□□□□ -1.07
SERAC1-207ENST00000607742 RAD54L2Q9Y4B4 1467 aa8.34□□□□□ -1.07
SERAC1-207ENST00000607742 IGF1RP08069 1367 aa8.34□□□□□ -1.07
SERAC1-207ENST00000607742 FGD5Q6ZNL6 1462 aa8.3□□□□□ -1.08
SERAC1-207ENST00000607742 NEUROD1Q13562 356 aa8.3□□□□□ -1.08
SERAC1-207ENST00000607742 PRDM2Q13029 1718 aa8.3□□□□□ -1.08
SERAC1-207ENST00000607742 BCL11AQ9H165 835 aa8.29□□□□□ -1.08
SERAC1-207ENST00000607742 LRRIQ1Q96JM4 1722 aa8.28□□□□□ -1.08
SERAC1-207ENST00000607742 CADPSQ9ULU8 1353 aa8.28□□□□□ -1.08
SERAC1-207ENST00000607742 CUX2O14529 1486 aa8.27□□□□□ -1.09
SERAC1-207ENST00000607742 ERICH3Q5RHP9 1530 aa8.27□□□□□ -1.09
SERAC1-207ENST00000607742 TULP1O00294 542 aaPredicted RBP8.27□□□□□ -1.09
SERAC1-207ENST00000607742 PODXL2Q9NZ53 605 aa8.27□□□□□ -1.09
SERAC1-207ENST00000607742 P3H3Q8IVL6 736 aa8.26□□□□□ -1.09
SERAC1-207ENST00000607742 CENPBP07199 599 aaPredicted RBP8.26□□□□□ -1.09
SERAC1-207ENST00000607742 POLR3GLQ9BT43 218 aa8.25□□□□□ -1.09
SERAC1-207ENST00000607742 URB2Q14146 1524 aaKnown RBP8.24□□□□□ -1.09
SERAC1-207ENST00000607742 APLP2Q06481 763 aa8.24□□□□□ -1.09
SERAC1-207ENST00000607742 POLA1P09884 1462 aaPredicted RBP8.23□□□□□ -1.09
SERAC1-207ENST00000607742 ZEB1P37275 1124 aaPredicted RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms