RNA–Protein interactions for RNA: ENST00000605613.1

PALMD-204, Transcript of palmdelphin, humanhuman

Gene PALMD, Length 2,244 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-204ENST00000605613 POTEDQ86YR6 584 aa14.83□□□□□ -0.04
PALMD-204ENST00000605613 AEBP2Q6ZN18 517 aaPredicted RBP14.63□□□□□ -0.07
PALMD-204ENST00000605613 CHIC1Q5VXU3 224 aa13.76□□□□□ -0.21
PALMD-204ENST00000605613 NISCHQ9Y2I1 1504 aa13.13□□□□□ -0.31
PALMD-204ENST00000605613 SENP3Q9H4L4 574 aaPredicted RBP12.76□□□□□ -0.37
PALMD-204ENST00000605613 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
PALMD-204ENST00000605613 MSH5O43196 834 aa12.05□□□□□ -0.48
PALMD-204ENST00000605613 FOXD1Q16676 465 aa11.95□□□□□ -0.5
PALMD-204ENST00000605613 CACNB1Q02641 598 aaPredicted RBP11.44□□□□□ -0.58
PALMD-204ENST00000605613 POTEHQ6S545 545 aa11.27□□□□□ -0.61
PALMD-204ENST00000605613 CCDC180Q9P1Z9 1646 aa11.2□□□□□ -0.62
PALMD-204ENST00000605613 ZCCHC6Q5VYS8 1495 aaKnown RBP11.13□□□□□ -0.63
PALMD-204ENST00000605613 SHROOM4Q9ULL8 1493 aa11.09□□□□□ -0.63
PALMD-204ENST00000605613 PIAS4Q8N2W9 510 aaPredicted RBP10.89□□□□□ -0.67
PALMD-204ENST00000605613 SUPT5HO00267 1087 aaKnown RBP10.79□□□□□ -0.68
PALMD-204ENST00000605613 DCAF1Q9Y4B6 1507 aa10.78□□□□□ -0.68
PALMD-204ENST00000605613 DCAF8L2P0C7V8 631 aa10.72□□□□□ -0.69
PALMD-204ENST00000605613 MYO15BQ96JP2 1530 aa10.59□□□□□ -0.71
PALMD-204ENST00000605613 ABCC9O60706 1549 aa10.5□□□□□ -0.73
PALMD-204ENST00000605613 SCRIBQ14160 1630 aa10.48□□□□□ -0.73
PALMD-204ENST00000605613 RSF1Q96T23 1441 aaPredicted RBP10.37□□□□□ -0.75
PALMD-204ENST00000605613 NACADO15069 1562 aa10.33□□□□□ -0.76
PALMD-204ENST00000605613 RB1CC1Q8TDY2 1594 aa10.3□□□□□ -0.76
PALMD-204ENST00000605613 PPP6R1Q9UPN7 881 aa10.29□□□□□ -0.76
PALMD-204ENST00000605613 CECR2Q9BXF3 1484 aa10.27□□□□□ -0.77
PALMD-204ENST00000605613 MROH2BQ7Z745 1585 aa10.23□□□□□ -0.77
PALMD-204ENST00000605613 LOC105371045A0A1W2PR82 267 aa10.2□□□□□ -0.78
PALMD-204ENST00000605613 ADRA2BP18089 450 aa10.19□□□□□ -0.78
PALMD-204ENST00000605613 WIZO95785 1651 aa10.17□□□□□ -0.78
PALMD-204ENST00000605613 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
PALMD-204ENST00000605613 BAZ1AQ9NRL2 1556 aaPredicted RBP10.1□□□□□ -0.79
PALMD-204ENST00000605613 EIF4G1Q04637 1599 aaKnown RBP10.1□□□□□ -0.79
PALMD-204ENST00000605613 PLSCR2Q9NRY7 297 aa10.09□□□□□ -0.79
PALMD-204ENST00000605613 PCGF6Q9BYE7 350 aa10.09□□□□□ -0.79
PALMD-204ENST00000605613 HRCP23327 699 aa10.08□□□□□ -0.8
PALMD-204ENST00000605613 TRIM41Q8WV44 630 aa10.03□□□□□ -0.8
PALMD-204ENST00000605613 SMARCA4P51532 1647 aa10.03□□□□□ -0.8
PALMD-204ENST00000605613 RNF39Q9H2S5 420 aa10.01□□□□□ -0.81
PALMD-204ENST00000605613 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
PALMD-204ENST00000605613 BICRAQ9NZM4 1560 aa9.98□□□□□ -0.81
PALMD-204ENST00000605613 FAM9AQ8IZU1 332 aaPredicted RBP9.97□□□□□ -0.81
PALMD-204ENST00000605613 SMARCA2P51531 1590 aa9.96□□□□□ -0.82
PALMD-204ENST00000605613 CCDC88BA6NC98 1476 aa9.93□□□□□ -0.82
PALMD-204ENST00000605613 DMRT2Q9Y5R5 561 aa9.93□□□□□ -0.82
PALMD-204ENST00000605613 PPARGC1BQ86YN6 1023 aaKnown RBP9.92□□□□□ -0.82
PALMD-204ENST00000605613 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
PALMD-204ENST00000605613 TRIM26Q12899 539 aaPredicted RBP9.89□□□□□ -0.83
PALMD-204ENST00000605613 EHMT2Q96KQ7 1210 aa9.88□□□□□ -0.83
PALMD-204ENST00000605613 PABPN1Q86U42 306 aaKnown RBP eCLIP9.87□□□□□ -0.83
PALMD-204ENST00000605613 PEG3Q9GZU2 1588 aa9.86□□□□□ -0.83
PALMD-204ENST00000605613 C1QBPQ07021 282 aaKnown RBP9.84□□□□□ -0.83
PALMD-204ENST00000605613 PLPPR3Q6T4P5 718 aa9.83□□□□□ -0.84
PALMD-204ENST00000605613 SOGA1O94964 1423 aa9.79□□□□□ -0.84
PALMD-204ENST00000605613 RUSC2Q8N2Y8 1516 aa9.77□□□□□ -0.84
PALMD-204ENST00000605613 ATAD2BQ9ULI0 1458 aa9.76□□□□□ -0.85
PALMD-204ENST00000605613 SLC24A1O60721 1099 aa9.76□□□□□ -0.85
PALMD-204ENST00000605613 SYNJ1O43426 1573 aa9.73□□□□□ -0.85
PALMD-204ENST00000605613 SP7Q8TDD2 431 aaPredicted RBP9.7□□□□□ -0.86
PALMD-204ENST00000605613 WRNQ14191 1432 aaPredicted RBP eCLIP9.7□□□□□ -0.86
PALMD-204ENST00000605613 CEP162Q5TB80 1403 aa9.7□□□□□ -0.86
PALMD-204ENST00000605613 BAZ1BQ9UIG0 1483 aaKnown RBP9.69□□□□□ -0.86
PALMD-204ENST00000605613 MAPK8IP2Q13387 824 aaPredicted RBP9.68□□□□□ -0.86
PALMD-204ENST00000605613 EEA1Q15075 1411 aa9.66□□□□□ -0.86
PALMD-204ENST00000605613 TNIKQ9UKE5 1360 aa9.65□□□□□ -0.86
PALMD-204ENST00000605613 CSRNP3Q8WYN3 585 aa9.63□□□□□ -0.87
PALMD-204ENST00000605613 GOLGA3Q08378 1498 aa9.61□□□□□ -0.87
PALMD-204ENST00000605613 KIF21BO75037 1637 aa9.61□□□□□ -0.87
PALMD-204ENST00000605613 HMGXB3Q12766 1538 aa9.59□□□□□ -0.87
PALMD-204ENST00000605613 TOP2BQ02880 1626 aa9.59□□□□□ -0.87
PALMD-204ENST00000605613 ZEB1P37275 1124 aaPredicted RBP9.58□□□□□ -0.88
PALMD-204ENST00000605613 BIVM-ERCC5R4GMW8 1640 aa9.57□□□□□ -0.88
PALMD-204ENST00000605613 NCAPD3P42695 1498 aa9.56□□□□□ -0.88
PALMD-204ENST00000605613 CEP164Q9UPV0 1460 aa9.56□□□□□ -0.88
PALMD-204ENST00000605613 RAPGEF2Q9Y4G8 1499 aa9.56□□□□□ -0.88
PALMD-204ENST00000605613 TTBK1Q5TCY1 1321 aaPredicted RBP9.55□□□□□ -0.88
PALMD-204ENST00000605613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.55□□□□□ -0.88
PALMD-204ENST00000605613 UBTFP17480 764 aaKnown RBP9.54□□□□□ -0.88
PALMD-204ENST00000605613 CUX1P39880 1505 aa9.52□□□□□ -0.89
PALMD-204ENST00000605613 DCAF8L1A6NGE4 600 aa9.5□□□□□ -0.89
PALMD-204ENST00000605613 CLIP1P30622 1438 aa9.5□□□□□ -0.89
PALMD-204ENST00000605613 CFTRP13569 1480 aa9.49□□□□□ -0.89
PALMD-204ENST00000605613 PRXQ9BXM0 1461 aa9.48□□□□□ -0.89
PALMD-204ENST00000605613 SCAF1Q9H7N4 1312 aaKnown RBP9.47□□□□□ -0.89
PALMD-204ENST00000605613 VPS8Q8N3P4 1428 aa9.47□□□□□ -0.89
PALMD-204ENST00000605613 ERICH3Q5RHP9 1530 aa9.45□□□□□ -0.9
PALMD-204ENST00000605613 CCER1Q8TC90 406 aaPredicted RBP9.44□□□□□ -0.9
PALMD-204ENST00000605613 PRDM2Q13029 1718 aa9.44□□□□□ -0.9
PALMD-204ENST00000605613 ARAP1Q96P48 1450 aa9.43□□□□□ -0.9
PALMD-204ENST00000605613 RANGAP1P46060 587 aaPredicted RBP9.37□□□□□ -0.91
PALMD-204ENST00000605613 CC2D2AQ9P2K1 1620 aa9.37□□□□□ -0.91
PALMD-204ENST00000605613 KIF27Q86VH2 1401 aa9.37□□□□□ -0.91
PALMD-204ENST00000605613 CADPSQ9ULU8 1353 aa9.35□□□□□ -0.91
PALMD-204ENST00000605613 ARHGAP35Q9NRY4 1499 aa9.34□□□□□ -0.91
PALMD-204ENST00000605613 FGD5Q6ZNL6 1462 aa9.33□□□□□ -0.92
PALMD-204ENST00000605613 HNRNPUL2Q1KMD3 747 aaKnown RBP9.32□□□□□ -0.92
PALMD-204ENST00000605613 CUX2O14529 1486 aa9.32□□□□□ -0.92
PALMD-204ENST00000605613 KANK4Q5T7N3 995 aaPredicted RBP9.32□□□□□ -0.92
PALMD-204ENST00000605613 IGF1RP08069 1367 aa9.31□□□□□ -0.92
PALMD-204ENST00000605613 FANCD2Q9BXW9 1451 aa9.28□□□□□ -0.92
PALMD-204ENST00000605613 NESP48681 1621 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms