RNA–Protein interactions for RNA: ENST00000602734.4

CNTNAP2-204, Transcript of contactin associated protein like 2, humanhuman

TSL 3

Gene CNTNAP2, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-204ENST00000602734 AEBP2Q6ZN18 517 aaPredicted RBP28.05■■■□□ 2.08
CNTNAP2-204ENST00000602734 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
CNTNAP2-204ENST00000602734 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
CNTNAP2-204ENST00000602734 PHF23Q9BUL5 403 aaPredicted RBP23.68■■□□□ 1.38
CNTNAP2-204ENST00000602734 FOXD1Q16676 465 aa22.44■■□□□ 1.18
CNTNAP2-204ENST00000602734 POTEDQ86YR6 584 aa21.37■■□□□ 1.01
CNTNAP2-204ENST00000602734 MSH5O43196 834 aa21.23■□□□□ 0.99
CNTNAP2-204ENST00000602734 PIAS4Q8N2W9 510 aaPredicted RBP20.94■□□□□ 0.94
CNTNAP2-204ENST00000602734 NISCHQ9Y2I1 1504 aa20.91■□□□□ 0.94
CNTNAP2-204ENST00000602734 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
CNTNAP2-204ENST00000602734 PPP6R1Q9UPN7 881 aa20.64■□□□□ 0.89
CNTNAP2-204ENST00000602734 ADRA2BP18089 450 aa20.59■□□□□ 0.89
CNTNAP2-204ENST00000602734 ABCC9O60706 1549 aa20.57■□□□□ 0.88
CNTNAP2-204ENST00000602734 DNAJC5BQ9UF47 199 aa20.36■□□□□ 0.85
CNTNAP2-204ENST00000602734 DNAJC5Q9H3Z4 198 aa19.71■□□□□ 0.75
CNTNAP2-204ENST00000602734 PABPN1Q86U42 306 aaKnown RBP eCLIP19.14■□□□□ 0.65
CNTNAP2-204ENST00000602734 CCDC180Q9P1Z9 1646 aa19.03■□□□□ 0.64
CNTNAP2-204ENST00000602734 MAPK8IP2Q13387 824 aaPredicted RBP19.02■□□□□ 0.64
CNTNAP2-204ENST00000602734 DMRT2Q9Y5R5 561 aa19■□□□□ 0.63
CNTNAP2-204ENST00000602734 RB1CC1Q8TDY2 1594 aa18.94■□□□□ 0.62
CNTNAP2-204ENST00000602734 SCAF1Q9H7N4 1312 aaKnown RBP18.92■□□□□ 0.62
CNTNAP2-204ENST00000602734 DCAF8L2P0C7V8 631 aa18.74■□□□□ 0.59
CNTNAP2-204ENST00000602734 CECR2Q9BXF3 1484 aa18.67■□□□□ 0.58
CNTNAP2-204ENST00000602734 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
CNTNAP2-204ENST00000602734 NACADO15069 1562 aa18.51■□□□□ 0.55
CNTNAP2-204ENST00000602734 CACNB1Q02641 598 aaPredicted RBP18.49■□□□□ 0.55
CNTNAP2-204ENST00000602734 DCAF8L1A6NGE4 600 aa18.35■□□□□ 0.53
CNTNAP2-204ENST00000602734 CC2D2AQ9P2K1 1620 aa18.33■□□□□ 0.52
CNTNAP2-204ENST00000602734 BICRAQ9NZM4 1560 aa18.23■□□□□ 0.51
CNTNAP2-204ENST00000602734 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
CNTNAP2-204ENST00000602734 CUX2O14529 1486 aa18.19■□□□□ 0.5
CNTNAP2-204ENST00000602734 HOXD11P31277 338 aaPredicted RBP18.12■□□□□ 0.49
CNTNAP2-204ENST00000602734 SHROOM4Q9ULL8 1493 aa18.04■□□□□ 0.48
CNTNAP2-204ENST00000602734 RNF39Q9H2S5 420 aa18.03■□□□□ 0.48
CNTNAP2-204ENST00000602734 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
CNTNAP2-204ENST00000602734 EIF4G1Q04637 1599 aaKnown RBP18.01■□□□□ 0.47
CNTNAP2-204ENST00000602734 CNKSR2Q8WXI2 1034 aa17.98■□□□□ 0.47
CNTNAP2-204ENST00000602734 ERCC6Q03468 1493 aa17.98■□□□□ 0.47
CNTNAP2-204ENST00000602734 RNF216Q9NWF9 866 aaPredicted RBP17.9■□□□□ 0.46
CNTNAP2-204ENST00000602734 MYO15BQ96JP2 1530 aa17.81■□□□□ 0.44
CNTNAP2-204ENST00000602734 C1QBPQ07021 282 aaKnown RBP17.77■□□□□ 0.44
CNTNAP2-204ENST00000602734 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
CNTNAP2-204ENST00000602734 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
CNTNAP2-204ENST00000602734 TRHP20396 242 aaPredicted RBP17.45■□□□□ 0.38
CNTNAP2-204ENST00000602734 NCBP3Q53F19 620 aaKnown RBP17.44■□□□□ 0.38
CNTNAP2-204ENST00000602734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.37
CNTNAP2-204ENST00000602734 NESP48681 1621 aa17.23■□□□□ 0.35
CNTNAP2-204ENST00000602734 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
CNTNAP2-204ENST00000602734 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
CNTNAP2-204ENST00000602734 CYB5RLQ6IPT4 315 aa17.13■□□□□ 0.33
CNTNAP2-204ENST00000602734 ILDR1Q86SU0 546 aaPredicted RBP17.13■□□□□ 0.33
CNTNAP2-204ENST00000602734 NPM3O75607 178 aaKnown RBP17.12■□□□□ 0.33
CNTNAP2-204ENST00000602734 PDS5BQ9NTI5 1447 aa17.09■□□□□ 0.33
CNTNAP2-204ENST00000602734 SMARCA2P51531 1590 aa17.09■□□□□ 0.33
CNTNAP2-204ENST00000602734 THOC2Q8NI27 1593 aaKnown RBP17.08■□□□□ 0.32
CNTNAP2-204ENST00000602734 ZCCHC6Q5VYS8 1495 aaKnown RBP17■□□□□ 0.31
CNTNAP2-204ENST00000602734 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
CNTNAP2-204ENST00000602734 ATAD2BQ9ULI0 1458 aa16.93■□□□□ 0.3
CNTNAP2-204ENST00000602734 RIMBP3CA6NJZ7 1639 aa16.9■□□□□ 0.3
CNTNAP2-204ENST00000602734 RIMBP3BA6NNM3 1639 aa16.9■□□□□ 0.3
CNTNAP2-204ENST00000602734 RIMBP3Q9UFD9 1639 aa16.9■□□□□ 0.3
CNTNAP2-204ENST00000602734 LAMC3Q9Y6N6 1575 aa16.88■□□□□ 0.29
CNTNAP2-204ENST00000602734 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
CNTNAP2-204ENST00000602734 MRC2Q9UBG0 1479 aa16.86■□□□□ 0.29
CNTNAP2-204ENST00000602734 ARHGEF11O15085 1522 aa16.84■□□□□ 0.29
CNTNAP2-204ENST00000602734 CAPN15O75808 1086 aa16.82■□□□□ 0.28
CNTNAP2-204ENST00000602734 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
CNTNAP2-204ENST00000602734 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
CNTNAP2-204ENST00000602734 SPINK5Q9NQ38 1064 aaPredicted RBP16.76■□□□□ 0.27
CNTNAP2-204ENST00000602734 DSG3P32926 999 aa16.75■□□□□ 0.27
CNTNAP2-204ENST00000602734 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
CNTNAP2-204ENST00000602734 WDR62O43379 1518 aa16.7■□□□□ 0.26
CNTNAP2-204ENST00000602734 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
CNTNAP2-204ENST00000602734 POTEHQ6S545 545 aa16.7■□□□□ 0.26
CNTNAP2-204ENST00000602734 FBLN2P98095 1184 aa16.58■□□□□ 0.24
CNTNAP2-204ENST00000602734 ARAP1Q96P48 1450 aa16.58■□□□□ 0.24
CNTNAP2-204ENST00000602734 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.24
CNTNAP2-204ENST00000602734 APLP2Q06481 763 aa16.46■□□□□ 0.23
CNTNAP2-204ENST00000602734 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
CNTNAP2-204ENST00000602734 FANCD2Q9BXW9 1451 aa16.45■□□□□ 0.22
CNTNAP2-204ENST00000602734 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
CNTNAP2-204ENST00000602734 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
CNTNAP2-204ENST00000602734 KCNA4P22459 653 aa16.42■□□□□ 0.22
CNTNAP2-204ENST00000602734 ZNF219Q9P2Y4 722 aaPredicted RBP16.4■□□□□ 0.22
CNTNAP2-204ENST00000602734 ABCB7O75027 752 aa16.37■□□□□ 0.21
CNTNAP2-204ENST00000602734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.33■□□□□ 0.2
CNTNAP2-204ENST00000602734 HNRNPUL2Q1KMD3 747 aaKnown RBP16.33■□□□□ 0.2
CNTNAP2-204ENST00000602734 FBXO41Q8TF61 875 aa16.32■□□□□ 0.2
CNTNAP2-204ENST00000602734 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
CNTNAP2-204ENST00000602734 KDM4FA0A1W2PPD8 638 aa16.31■□□□□ 0.2
CNTNAP2-204ENST00000602734 ZNF608Q9ULD9 1512 aaPredicted RBP16.3■□□□□ 0.2
CNTNAP2-204ENST00000602734 URB2Q14146 1524 aaKnown RBP16.27■□□□□ 0.2
CNTNAP2-204ENST00000602734 PEG3Q9GZU2 1588 aa16.26■□□□□ 0.19
CNTNAP2-204ENST00000602734 CHMP7Q8WUX9 453 aaPredicted RBP16.21■□□□□ 0.19
CNTNAP2-204ENST00000602734 SAMD1Q6SPF0 538 aaPredicted RBP16.2■□□□□ 0.18
CNTNAP2-204ENST00000602734 LMTK3Q96Q04 1460 aa16.2■□□□□ 0.18
CNTNAP2-204ENST00000602734 SOCS7O14512 581 aa16.17■□□□□ 0.18
CNTNAP2-204ENST00000602734 CFTRP13569 1480 aa16.15■□□□□ 0.18
CNTNAP2-204ENST00000602734 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.17
CNTNAP2-204ENST00000602734 MROH2BQ7Z745 1585 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms