RNA–Protein interactions for RNA: ENST00000602396.1

AC004817.4-201, humanhuman

BASIC

Gene AC004817.4, Length 3,625 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004817.4-201ENST00000602396 NISCHQ9Y2I1 1504 aa10.92□□□□□ -0.66
AC004817.4-201ENST00000602396 SHROOM4Q9ULL8 1493 aa9.36□□□□□ -0.91
AC004817.4-201ENST00000602396 SLC24A1O60721 1099 aa9.32□□□□□ -0.92
AC004817.4-201ENST00000602396 CCDC180Q9P1Z9 1646 aa9.26□□□□□ -0.93
AC004817.4-201ENST00000602396 ZCCHC6Q5VYS8 1495 aaKnown RBP9.24□□□□□ -0.93
AC004817.4-201ENST00000602396 MYT1Q01538 1121 aa9.19□□□□□ -0.94
AC004817.4-201ENST00000602396 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
AC004817.4-201ENST00000602396 SUPT5HO00267 1087 aaKnown RBP9.08□□□□□ -0.96
AC004817.4-201ENST00000602396 DCAF8L2P0C7V8 631 aa9.06□□□□□ -0.96
AC004817.4-201ENST00000602396 TTBK1Q5TCY1 1321 aaPredicted RBP8.91□□□□□ -0.98
AC004817.4-201ENST00000602396 MYO15BQ96JP2 1530 aa8.89□□□□□ -0.99
AC004817.4-201ENST00000602396 DCAF1Q9Y4B6 1507 aa8.89□□□□□ -0.99
AC004817.4-201ENST00000602396 CHIC1Q5VXU3 224 aa8.79□□□□□ -1
AC004817.4-201ENST00000602396 SCRIBQ14160 1630 aa8.78□□□□□ -1
AC004817.4-201ENST00000602396 AEBP2Q6ZN18 517 aaPredicted RBP8.75□□□□□ -1.01
AC004817.4-201ENST00000602396 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
AC004817.4-201ENST00000602396 ABCC9O60706 1549 aa8.72□□□□□ -1.01
AC004817.4-201ENST00000602396 RSF1Q96T23 1441 aaPredicted RBP8.64□□□□□ -1.03
AC004817.4-201ENST00000602396 ERICH6Q7L0X2 663 aa8.64□□□□□ -1.03
AC004817.4-201ENST00000602396 CECR2Q9BXF3 1484 aa8.61□□□□□ -1.03
AC004817.4-201ENST00000602396 RB1CC1Q8TDY2 1594 aa8.61□□□□□ -1.03
AC004817.4-201ENST00000602396 LOC105371045A0A1W2PR82 267 aa8.6□□□□□ -1.03
AC004817.4-201ENST00000602396 NACADO15069 1562 aa8.55□□□□□ -1.04
AC004817.4-201ENST00000602396 MROH2BQ7Z745 1585 aa8.55□□□□□ -1.04
AC004817.4-201ENST00000602396 PRKCSHP14314 528 aaPredicted RBP8.52□□□□□ -1.05
AC004817.4-201ENST00000602396 WIZO95785 1651 aa8.52□□□□□ -1.05
AC004817.4-201ENST00000602396 PLPPR3Q6T4P5 718 aa8.51□□□□□ -1.05
AC004817.4-201ENST00000602396 UNC13AQ9UPW8 1703 aa8.49□□□□□ -1.05
AC004817.4-201ENST00000602396 HRCP23327 699 aa8.48□□□□□ -1.05
AC004817.4-201ENST00000602396 PCGF6Q9BYE7 350 aa8.48□□□□□ -1.05
AC004817.4-201ENST00000602396 DAXXQ9UER7 740 aaPredicted RBP8.45□□□□□ -1.06
AC004817.4-201ENST00000602396 FAM9AQ8IZU1 332 aaPredicted RBP8.41□□□□□ -1.06
AC004817.4-201ENST00000602396 EIF4G1Q04637 1599 aaKnown RBP8.39□□□□□ -1.07
AC004817.4-201ENST00000602396 BAZ1AQ9NRL2 1556 aaPredicted RBP8.39□□□□□ -1.07
AC004817.4-201ENST00000602396 APLP2Q06481 763 aa8.39□□□□□ -1.07
AC004817.4-201ENST00000602396 TRIM41Q8WV44 630 aa8.38□□□□□ -1.07
AC004817.4-201ENST00000602396 PPARGC1BQ86YN6 1023 aaKnown RBP8.37□□□□□ -1.07
AC004817.4-201ENST00000602396 RTN4Q9NQC3 1192 aaKnown RBP8.36□□□□□ -1.07
AC004817.4-201ENST00000602396 BICRAQ9NZM4 1560 aa8.35□□□□□ -1.07
AC004817.4-201ENST00000602396 SMARCA4P51532 1647 aa8.35□□□□□ -1.07
AC004817.4-201ENST00000602396 PABPN1Q86U42 306 aaKnown RBP eCLIP8.34□□□□□ -1.07
AC004817.4-201ENST00000602396 ABCC8Q09428 1581 aa8.32□□□□□ -1.08
AC004817.4-201ENST00000602396 CCDC88BA6NC98 1476 aa8.3□□□□□ -1.08
AC004817.4-201ENST00000602396 SMARCA2P51531 1590 aa8.3□□□□□ -1.08
AC004817.4-201ENST00000602396 TOP2AP11388 1531 aaKnown RBP8.29□□□□□ -1.08
AC004817.4-201ENST00000602396 TRIM26Q12899 539 aaPredicted RBP8.23□□□□□ -1.09
AC004817.4-201ENST00000602396 RUSC2Q8N2Y8 1516 aa8.22□□□□□ -1.09
AC004817.4-201ENST00000602396 SOGA1O94964 1423 aa8.2□□□□□ -1.1
AC004817.4-201ENST00000602396 PEG3Q9GZU2 1588 aa8.16□□□□□ -1.1
AC004817.4-201ENST00000602396 NCBP3Q53F19 620 aaKnown RBP8.15□□□□□ -1.11
AC004817.4-201ENST00000602396 SYNJ1O43426 1573 aa8.13□□□□□ -1.11
AC004817.4-201ENST00000602396 ATAD2BQ9ULI0 1458 aa8.13□□□□□ -1.11
AC004817.4-201ENST00000602396 ZEB1P37275 1124 aaPredicted RBP8.11□□□□□ -1.11
AC004817.4-201ENST00000602396 EIF5BO60841 1220 aaKnown RBP8.08□□□□□ -1.12
AC004817.4-201ENST00000602396 CEP162Q5TB80 1403 aa8.07□□□□□ -1.12
AC004817.4-201ENST00000602396 BAZ1BQ9UIG0 1483 aaKnown RBP8.07□□□□□ -1.12
AC004817.4-201ENST00000602396 WRNQ14191 1432 aaPredicted RBP eCLIP8.07□□□□□ -1.12
AC004817.4-201ENST00000602396 BCL11AQ9H165 835 aa8.05□□□□□ -1.12
AC004817.4-201ENST00000602396 CSRNP3Q8WYN3 585 aa8.03□□□□□ -1.12
AC004817.4-201ENST00000602396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.02□□□□□ -1.13
AC004817.4-201ENST00000602396 TNIKQ9UKE5 1360 aa8.01□□□□□ -1.13
AC004817.4-201ENST00000602396 TIMELESSQ9UNS1 1208 aa8.01□□□□□ -1.13
AC004817.4-201ENST00000602396 RAPGEF2Q9Y4G8 1499 aa7.99□□□□□ -1.13
AC004817.4-201ENST00000602396 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
AC004817.4-201ENST00000602396 GOLGA3Q08378 1498 aa7.97□□□□□ -1.13
AC004817.4-201ENST00000602396 RANGAP1P46060 587 aaPredicted RBP7.97□□□□□ -1.13
AC004817.4-201ENST00000602396 TOP2BQ02880 1626 aa7.97□□□□□ -1.13
AC004817.4-201ENST00000602396 TULP1O00294 542 aaPredicted RBP7.97□□□□□ -1.13
AC004817.4-201ENST00000602396 KIF21BO75037 1637 aa7.96□□□□□ -1.14
AC004817.4-201ENST00000602396 EEA1Q15075 1411 aa7.95□□□□□ -1.14
AC004817.4-201ENST00000602396 CUX1P39880 1505 aa7.95□□□□□ -1.14
AC004817.4-201ENST00000602396 BIVM-ERCC5R4GMW8 1640 aa7.95□□□□□ -1.14
AC004817.4-201ENST00000602396 CCER1Q8TC90 406 aaPredicted RBP7.94□□□□□ -1.14
AC004817.4-201ENST00000602396 NCAPD3P42695 1498 aa7.94□□□□□ -1.14
AC004817.4-201ENST00000602396 HMGXB3Q12766 1538 aa7.93□□□□□ -1.14
AC004817.4-201ENST00000602396 CEP164Q9UPV0 1460 aa7.93□□□□□ -1.14
AC004817.4-201ENST00000602396 KLHL34Q8N239 644 aa7.92□□□□□ -1.14
AC004817.4-201ENST00000602396 PLEKHG5O94827 1062 aa7.91□□□□□ -1.14
AC004817.4-201ENST00000602396 KCNA4P22459 653 aa7.91□□□□□ -1.14
AC004817.4-201ENST00000602396 CLIP1P30622 1438 aa7.9□□□□□ -1.14
AC004817.4-201ENST00000602396 CFTRP13569 1480 aa7.89□□□□□ -1.15
AC004817.4-201ENST00000602396 SCAF1Q9H7N4 1312 aaKnown RBP7.89□□□□□ -1.15
AC004817.4-201ENST00000602396 PRXQ9BXM0 1461 aa7.87□□□□□ -1.15
AC004817.4-201ENST00000602396 AMER1Q5JTC6 1135 aaPredicted RBP7.87□□□□□ -1.15
AC004817.4-201ENST00000602396 ARAP1Q96P48 1450 aa7.86□□□□□ -1.15
AC004817.4-201ENST00000602396 VPS8Q8N3P4 1428 aa7.86□□□□□ -1.15
AC004817.4-201ENST00000602396 CC2D2AQ9P2K1 1620 aa7.85□□□□□ -1.15
AC004817.4-201ENST00000602396 DNAJC5BQ9UF47 199 aa7.84□□□□□ -1.15
AC004817.4-201ENST00000602396 PRDM2Q13029 1718 aa7.83□□□□□ -1.16
AC004817.4-201ENST00000602396 HNRNPUL2Q1KMD3 747 aaKnown RBP7.83□□□□□ -1.16
AC004817.4-201ENST00000602396 PODXL2Q9NZ53 605 aa7.83□□□□□ -1.16
AC004817.4-201ENST00000602396 KANK4Q5T7N3 995 aaPredicted RBP7.83□□□□□ -1.16
AC004817.4-201ENST00000602396 ARXQ96QS3 562 aa7.82□□□□□ -1.16
AC004817.4-201ENST00000602396 ERICH3Q5RHP9 1530 aa7.81□□□□□ -1.16
AC004817.4-201ENST00000602396 NESP48681 1621 aa7.81□□□□□ -1.16
AC004817.4-201ENST00000602396 DIEXFQ68CQ4 756 aaKnown RBP7.81□□□□□ -1.16
AC004817.4-201ENST00000602396 ACIN1Q9UKV3 1341 aaKnown RBP7.79□□□□□ -1.16
AC004817.4-201ENST00000602396 ARHGAP35Q9NRY4 1499 aa7.79□□□□□ -1.16
AC004817.4-201ENST00000602396 CENPBP07199 599 aaPredicted RBP7.79□□□□□ -1.16
AC004817.4-201ENST00000602396 FGD5Q6ZNL6 1462 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms