RNA–Protein interactions for RNA: ENST00000600530.1

NDUFB4P11-202, Transcript of NADH:ubiquinone oxidoreductase subunit B4 pseudogene 11, humanhuman

BASIC

Gene NDUFB4P11, Length 2,079 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4P11-202ENST00000600530 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
NDUFB4P11-202ENST00000600530 CCDC180Q9P1Z9 1646 aa19.52■□□□□ 0.71
NDUFB4P11-202ENST00000600530 HRCP23327 699 aa19.1■□□□□ 0.65
NDUFB4P11-202ENST00000600530 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
NDUFB4P11-202ENST00000600530 MYO15BQ96JP2 1530 aa18.63■□□□□ 0.57
NDUFB4P11-202ENST00000600530 SHROOM4Q9ULL8 1493 aa18.6■□□□□ 0.57
NDUFB4P11-202ENST00000600530 DCAF8L2P0C7V8 631 aa18.59■□□□□ 0.57
NDUFB4P11-202ENST00000600530 PPARGC1BQ86YN6 1023 aaKnown RBP18.57■□□□□ 0.56
NDUFB4P11-202ENST00000600530 SUPT5HO00267 1087 aaKnown RBP18.54■□□□□ 0.56
NDUFB4P11-202ENST00000600530 DCAF1Q9Y4B6 1507 aa18.54■□□□□ 0.56
NDUFB4P11-202ENST00000600530 PELP1Q8IZL8 1130 aaKnown RBP18.53■□□□□ 0.56
NDUFB4P11-202ENST00000600530 PCGF6Q9BYE7 350 aa18.53■□□□□ 0.56
NDUFB4P11-202ENST00000600530 CHIC1Q5VXU3 224 aa18.45■□□□□ 0.54
NDUFB4P11-202ENST00000600530 ABCC9O60706 1549 aa18.43■□□□□ 0.54
NDUFB4P11-202ENST00000600530 AEBP2Q6ZN18 517 aaPredicted RBP18.24■□□□□ 0.51
NDUFB4P11-202ENST00000600530 NACADO15069 1562 aa18.14■□□□□ 0.49
NDUFB4P11-202ENST00000600530 SCAF1Q9H7N4 1312 aaKnown RBP18.06■□□□□ 0.48
NDUFB4P11-202ENST00000600530 SCRIBQ14160 1630 aa18.04■□□□□ 0.48
NDUFB4P11-202ENST00000600530 TRIM26Q12899 539 aaPredicted RBP18.04■□□□□ 0.48
NDUFB4P11-202ENST00000600530 RB1CC1Q8TDY2 1594 aa17.97■□□□□ 0.47
NDUFB4P11-202ENST00000600530 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
NDUFB4P11-202ENST00000600530 LOC105371045A0A1W2PR82 267 aa17.91■□□□□ 0.46
NDUFB4P11-202ENST00000600530 MYT1Q01538 1121 aa17.84■□□□□ 0.45
NDUFB4P11-202ENST00000600530 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
NDUFB4P11-202ENST00000600530 ACIN1Q9UKV3 1341 aaKnown RBP17.61■□□□□ 0.41
NDUFB4P11-202ENST00000600530 NEUROD1Q13562 356 aa17.53■□□□□ 0.4
NDUFB4P11-202ENST00000600530 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.39
NDUFB4P11-202ENST00000600530 RSF1Q96T23 1441 aaPredicted RBP17.5■□□□□ 0.39
NDUFB4P11-202ENST00000600530 BICRAQ9NZM4 1560 aa17.49■□□□□ 0.39
NDUFB4P11-202ENST00000600530 PABPN1Q86U42 306 aaKnown RBP eCLIP17.43■□□□□ 0.38
NDUFB4P11-202ENST00000600530 MROH2BQ7Z745 1585 aa17.42■□□□□ 0.38
NDUFB4P11-202ENST00000600530 GTF3C3Q9Y5Q9 886 aa17.4■□□□□ 0.38
NDUFB4P11-202ENST00000600530 CENPBP07199 599 aaPredicted RBP17.32■□□□□ 0.36
NDUFB4P11-202ENST00000600530 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
NDUFB4P11-202ENST00000600530 WIZO95785 1651 aa17.31■□□□□ 0.36
NDUFB4P11-202ENST00000600530 SMARCA4P51532 1647 aa17.27■□□□□ 0.36
NDUFB4P11-202ENST00000600530 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
NDUFB4P11-202ENST00000600530 TRIM41Q8WV44 630 aa17.2■□□□□ 0.34
NDUFB4P11-202ENST00000600530 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.16■□□□□ 0.34
NDUFB4P11-202ENST00000600530 CCER1Q8TC90 406 aaPredicted RBP17.12■□□□□ 0.33
NDUFB4P11-202ENST00000600530 FAM9AQ8IZU1 332 aaPredicted RBP17.09■□□□□ 0.33
NDUFB4P11-202ENST00000600530 TOP2AP11388 1531 aaKnown RBP17.06■□□□□ 0.32
NDUFB4P11-202ENST00000600530 PEG3Q9GZU2 1588 aa17.02■□□□□ 0.31
NDUFB4P11-202ENST00000600530 ATAD2BQ9ULI0 1458 aa16.95■□□□□ 0.3
NDUFB4P11-202ENST00000600530 SMARCA2P51531 1590 aa16.93■□□□□ 0.3
NDUFB4P11-202ENST00000600530 ZNF316A6NFI3 1004 aaPredicted RBP16.93■□□□□ 0.3
NDUFB4P11-202ENST00000600530 EIF4G1Q04637 1599 aaKnown RBP16.92■□□□□ 0.3
NDUFB4P11-202ENST00000600530 CCDC88BA6NC98 1476 aa16.92■□□□□ 0.3
NDUFB4P11-202ENST00000600530 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
NDUFB4P11-202ENST00000600530 WRNQ14191 1432 aaPredicted RBP eCLIP16.88■□□□□ 0.29
NDUFB4P11-202ENST00000600530 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
NDUFB4P11-202ENST00000600530 YTHDC1Q96MU7 727 aaKnown RBP16.81■□□□□ 0.28
NDUFB4P11-202ENST00000600530 MIER1Q8N108 512 aa16.79■□□□□ 0.28
NDUFB4P11-202ENST00000600530 TTBK1Q5TCY1 1321 aaPredicted RBP16.79■□□□□ 0.28
NDUFB4P11-202ENST00000600530 NCAPD3P42695 1498 aa16.75■□□□□ 0.27
NDUFB4P11-202ENST00000600530 HMGXB3Q12766 1538 aa16.73■□□□□ 0.27
NDUFB4P11-202ENST00000600530 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
NDUFB4P11-202ENST00000600530 CC2D2AQ9P2K1 1620 aa16.66■□□□□ 0.26
NDUFB4P11-202ENST00000600530 CEP162Q5TB80 1403 aa16.65■□□□□ 0.26
NDUFB4P11-202ENST00000600530 ABCC8Q09428 1581 aa16.64■□□□□ 0.25
NDUFB4P11-202ENST00000600530 ANP32EQ9BTT0 268 aa16.63■□□□□ 0.25
NDUFB4P11-202ENST00000600530 SUPT16HQ9Y5B9 1047 aaKnown RBP16.61■□□□□ 0.25
NDUFB4P11-202ENST00000600530 BCL11AQ9H165 835 aa16.61■□□□□ 0.25
NDUFB4P11-202ENST00000600530 TNIKQ9UKE5 1360 aa16.58■□□□□ 0.24
NDUFB4P11-202ENST00000600530 TSHZ2Q9NRE2 1034 aa16.57■□□□□ 0.24
NDUFB4P11-202ENST00000600530 CFTRP13569 1480 aa16.43■□□□□ 0.22
NDUFB4P11-202ENST00000600530 SYNJ1O43426 1573 aa16.42■□□□□ 0.22
NDUFB4P11-202ENST00000600530 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
NDUFB4P11-202ENST00000600530 EEA1Q15075 1411 aa16.41■□□□□ 0.22
NDUFB4P11-202ENST00000600530 SOGA1O94964 1423 aa16.4■□□□□ 0.22
NDUFB4P11-202ENST00000600530 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
NDUFB4P11-202ENST00000600530 HNRNPUL2Q1KMD3 747 aaKnown RBP16.36■□□□□ 0.21
NDUFB4P11-202ENST00000600530 CADPSQ9ULU8 1353 aa16.34■□□□□ 0.21
NDUFB4P11-202ENST00000600530 GOLGA3Q08378 1498 aa16.34■□□□□ 0.21
NDUFB4P11-202ENST00000600530 TOP2BQ02880 1626 aa16.31■□□□□ 0.2
NDUFB4P11-202ENST00000600530 RUSC2Q8N2Y8 1516 aa16.31■□□□□ 0.2
NDUFB4P11-202ENST00000600530 DNAJC5BQ9UF47 199 aa16.3■□□□□ 0.2
NDUFB4P11-202ENST00000600530 BIVM-ERCC5R4GMW8 1640 aa16.3■□□□□ 0.2
NDUFB4P11-202ENST00000600530 CUX1P39880 1505 aa16.27■□□□□ 0.2
NDUFB4P11-202ENST00000600530 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
NDUFB4P11-202ENST00000600530 DHX57Q6P158 1386 aaKnown RBP16.24■□□□□ 0.19
NDUFB4P11-202ENST00000600530 NESP48681 1621 aa16.24■□□□□ 0.19
NDUFB4P11-202ENST00000600530 VPS8Q8N3P4 1428 aa16.22■□□□□ 0.19
NDUFB4P11-202ENST00000600530 CLIP1P30622 1438 aa16.2■□□□□ 0.18
NDUFB4P11-202ENST00000600530 KIF21BO75037 1637 aa16.18■□□□□ 0.18
NDUFB4P11-202ENST00000600530 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
NDUFB4P11-202ENST00000600530 CEP164Q9UPV0 1460 aa16.17■□□□□ 0.18
NDUFB4P11-202ENST00000600530 LAMC3Q9Y6N6 1575 aa16.17■□□□□ 0.18
NDUFB4P11-202ENST00000600530 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
NDUFB4P11-202ENST00000600530 BCANQ96GW7 911 aa16.09■□□□□ 0.17
NDUFB4P11-202ENST00000600530 KCNH8Q96L42 1107 aa16.09■□□□□ 0.17
NDUFB4P11-202ENST00000600530 FKBP8Q14318 412 aa16.09■□□□□ 0.17
NDUFB4P11-202ENST00000600530 CUX2O14529 1486 aa16.06■□□□□ 0.16
NDUFB4P11-202ENST00000600530 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
NDUFB4P11-202ENST00000600530 DNMBPQ6XZF7 1577 aa16.05■□□□□ 0.16
NDUFB4P11-202ENST00000600530 KIF21AQ7Z4S6 1674 aa16.04■□□□□ 0.16
NDUFB4P11-202ENST00000600530 MSH5O43196 834 aa16.04■□□□□ 0.16
NDUFB4P11-202ENST00000600530 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
NDUFB4P11-202ENST00000600530 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
NDUFB4P11-202ENST00000600530 APLP2Q06481 763 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms