RNA–Protein interactions for RNA: ENST00000599084.1

KDELR1-204, Transcript of KDEL endoplasmic reticulum protein retention receptor 1, humanhuman

TSL 2

Gene KDELR1, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR1-204ENST00000599084 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
KDELR1-204ENST00000599084 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
KDELR1-204ENST00000599084 SENP3Q9H4L4 574 aaPredicted RBP21.37■■□□□ 1.01
KDELR1-204ENST00000599084 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
KDELR1-204ENST00000599084 NISCHQ9Y2I1 1504 aa20.84■□□□□ 0.93
KDELR1-204ENST00000599084 FOXD1Q16676 465 aa19.74■□□□□ 0.75
KDELR1-204ENST00000599084 PLPPR3Q6T4P5 718 aa19.28■□□□□ 0.68
KDELR1-204ENST00000599084 ABCC9O60706 1549 aa18.9■□□□□ 0.62
KDELR1-204ENST00000599084 CCDC180Q9P1Z9 1646 aa18.77■□□□□ 0.6
KDELR1-204ENST00000599084 PIAS4Q8N2W9 510 aaPredicted RBP18.6■□□□□ 0.57
KDELR1-204ENST00000599084 MSH5O43196 834 aa18.58■□□□□ 0.56
KDELR1-204ENST00000599084 ADRA2BP18089 450 aa18.54■□□□□ 0.56
KDELR1-204ENST00000599084 PPP6R1Q9UPN7 881 aa18.53■□□□□ 0.56
KDELR1-204ENST00000599084 RB1CC1Q8TDY2 1594 aa17.96■□□□□ 0.46
KDELR1-204ENST00000599084 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
KDELR1-204ENST00000599084 NACADO15069 1562 aa17.79■□□□□ 0.44
KDELR1-204ENST00000599084 DCAF8L2P0C7V8 631 aa17.77■□□□□ 0.44
KDELR1-204ENST00000599084 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
KDELR1-204ENST00000599084 PABPN1Q86U42 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
KDELR1-204ENST00000599084 MYO15BQ96JP2 1530 aa17.49■□□□□ 0.39
KDELR1-204ENST00000599084 UNC13AQ9UPW8 1703 aa17.49■□□□□ 0.39
KDELR1-204ENST00000599084 BICRAQ9NZM4 1560 aa17.36■□□□□ 0.37
KDELR1-204ENST00000599084 ZCCHC6Q5VYS8 1495 aaKnown RBP17.22■□□□□ 0.35
KDELR1-204ENST00000599084 DCAF1Q9Y4B6 1507 aa17.21■□□□□ 0.35
KDELR1-204ENST00000599084 SCAF1Q9H7N4 1312 aaKnown RBP17.21■□□□□ 0.34
KDELR1-204ENST00000599084 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
KDELR1-204ENST00000599084 SCRIBQ14160 1630 aa17.08■□□□□ 0.32
KDELR1-204ENST00000599084 CC2D2AQ9P2K1 1620 aa17.05■□□□□ 0.32
KDELR1-204ENST00000599084 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
KDELR1-204ENST00000599084 EIF4G1Q04637 1599 aaKnown RBP16.98■□□□□ 0.31
KDELR1-204ENST00000599084 MAPK8IP2Q13387 824 aaPredicted RBP16.92■□□□□ 0.3
KDELR1-204ENST00000599084 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
KDELR1-204ENST00000599084 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
KDELR1-204ENST00000599084 CNKSR2Q8WXI2 1034 aa16.55■□□□□ 0.24
KDELR1-204ENST00000599084 DNAJC5Q9H3Z4 198 aa16.51■□□□□ 0.23
KDELR1-204ENST00000599084 NCBP3Q53F19 620 aaKnown RBP16.42■□□□□ 0.22
KDELR1-204ENST00000599084 NCAPD3P42695 1498 aa16.42■□□□□ 0.22
KDELR1-204ENST00000599084 ERCC6Q03468 1493 aa16.37■□□□□ 0.21
KDELR1-204ENST00000599084 HOXD11P31277 338 aaPredicted RBP16.36■□□□□ 0.21
KDELR1-204ENST00000599084 CUX2O14529 1486 aa16.35■□□□□ 0.21
KDELR1-204ENST00000599084 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
KDELR1-204ENST00000599084 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
KDELR1-204ENST00000599084 SMARCA2P51531 1590 aa16.32■□□□□ 0.2
KDELR1-204ENST00000599084 SMARCA4P51532 1647 aa16.28■□□□□ 0.2
KDELR1-204ENST00000599084 DCAF8L1A6NGE4 600 aa16.27■□□□□ 0.2
KDELR1-204ENST00000599084 HMGXB3Q12766 1538 aa16.26■□□□□ 0.19
KDELR1-204ENST00000599084 BAZ1AQ9NRL2 1556 aaPredicted RBP16.21■□□□□ 0.19
KDELR1-204ENST00000599084 BAZ1BQ9UIG0 1483 aaKnown RBP16.2■□□□□ 0.18
KDELR1-204ENST00000599084 NESP48681 1621 aa16.16■□□□□ 0.18
KDELR1-204ENST00000599084 PEG3Q9GZU2 1588 aa16.11■□□□□ 0.17
KDELR1-204ENST00000599084 LAMC3Q9Y6N6 1575 aa16.08■□□□□ 0.16
KDELR1-204ENST00000599084 MROH2BQ7Z745 1585 aa16.04■□□□□ 0.16
KDELR1-204ENST00000599084 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.16
KDELR1-204ENST00000599084 THOC2Q8NI27 1593 aaKnown RBP16.01■□□□□ 0.15
KDELR1-204ENST00000599084 NPM3O75607 178 aaKnown RBP16.01■□□□□ 0.15
KDELR1-204ENST00000599084 KIF21AQ7Z4S6 1674 aa15.96■□□□□ 0.15
KDELR1-204ENST00000599084 CADPSQ9ULU8 1353 aa15.93■□□□□ 0.14
KDELR1-204ENST00000599084 WIZO95785 1651 aa15.86■□□□□ 0.13
KDELR1-204ENST00000599084 MRC2Q9UBG0 1479 aa15.85■□□□□ 0.13
KDELR1-204ENST00000599084 KCNA4P22459 653 aa15.85■□□□□ 0.13
KDELR1-204ENST00000599084 WDR62O43379 1518 aa15.78■□□□□ 0.12
KDELR1-204ENST00000599084 CEP164Q9UPV0 1460 aa15.78■□□□□ 0.12
KDELR1-204ENST00000599084 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
KDELR1-204ENST00000599084 TRIM41Q8WV44 630 aa15.76■□□□□ 0.11
KDELR1-204ENST00000599084 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
KDELR1-204ENST00000599084 FANCD2Q9BXW9 1451 aa15.74■□□□□ 0.11
KDELR1-204ENST00000599084 CFTRP13569 1480 aa15.7■□□□□ 0.1
KDELR1-204ENST00000599084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
KDELR1-204ENST00000599084 RSF1Q96T23 1441 aaPredicted RBP15.68■□□□□ 0.1
KDELR1-204ENST00000599084 OSCARQ8IYS5 282 aa15.66■□□□□ 0.1
KDELR1-204ENST00000599084 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
KDELR1-204ENST00000599084 C1QBPQ07021 282 aaKnown RBP15.63■□□□□ 0.09
KDELR1-204ENST00000599084 URB2Q14146 1524 aaKnown RBP15.58■□□□□ 0.08
KDELR1-204ENST00000599084 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
KDELR1-204ENST00000599084 CCDC88BA6NC98 1476 aa15.48■□□□□ 0.07
KDELR1-204ENST00000599084 IFT140Q96RY7 1462 aa15.46■□□□□ 0.07
KDELR1-204ENST00000599084 ABCC8Q09428 1581 aa15.44■□□□□ 0.06
KDELR1-204ENST00000599084 TOPBP1Q92547 1522 aa15.41■□□□□ 0.06
KDELR1-204ENST00000599084 ZNF608Q9ULD9 1512 aaPredicted RBP15.41■□□□□ 0.06
KDELR1-204ENST00000599084 RIMBP3CA6NJZ7 1639 aa15.38■□□□□ 0.05
KDELR1-204ENST00000599084 RIMBP3BA6NNM3 1639 aa15.38■□□□□ 0.05
KDELR1-204ENST00000599084 RIMBP3Q9UFD9 1639 aa15.38■□□□□ 0.05
KDELR1-204ENST00000599084 DNMBPQ6XZF7 1577 aa15.35■□□□□ 0.05
KDELR1-204ENST00000599084 EIF4G3O43432 1585 aaKnown RBP15.32■□□□□ 0.04
KDELR1-204ENST00000599084 ARHGEF11O15085 1522 aa15.32■□□□□ 0.04
KDELR1-204ENST00000599084 FBLN2P98095 1184 aa15.3■□□□□ 0.04
KDELR1-204ENST00000599084 AQRO60306 1485 aaKnown RBP eCLIP15.28■□□□□ 0.041e-8■■■■■ 34.5
KDELR1-204ENST00000599084 CYB5RLQ6IPT4 315 aa15.28■□□□□ 0.04
KDELR1-204ENST00000599084 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
KDELR1-204ENST00000599084 U3KPZ7 1027 aaPredicted RBP15.25■□□□□ 0.03
KDELR1-204ENST00000599084 CHD1O14646 1710 aa15.25■□□□□ 0.03
KDELR1-204ENST00000599084 POLA1P09884 1462 aaPredicted RBP15.24■□□□□ 0.03
KDELR1-204ENST00000599084 SOGA1O94964 1423 aa15.22■□□□□ 0.03
KDELR1-204ENST00000599084 TRHP20396 242 aaPredicted RBP15.19■□□□□ 0.02
KDELR1-204ENST00000599084 TDRD9Q8NDG6 1382 aaKnown RBP15.19■□□□□ 0.02
KDELR1-204ENST00000599084 RAD54L2Q9Y4B4 1467 aa15.19■□□□□ 0.02
KDELR1-204ENST00000599084 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
KDELR1-204ENST00000599084 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
KDELR1-204ENST00000599084 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
KDELR1-204ENST00000599084 FGD5Q6ZNL6 1462 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms