RNA–Protein interactions for RNA: ENST00000598996.2

FENDRR-205, FOXF1 adjacent non-coding developmental regulatory RNA, humanhuman

TSL 1 (best)

Gene FENDRR, Length 2,835 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FENDRR-205ENST00000598996 NISCHQ9Y2I1 1504 aa18.72■□□□□ 0.59
FENDRR-205ENST00000598996 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
FENDRR-205ENST00000598996 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
FENDRR-205ENST00000598996 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
FENDRR-205ENST00000598996 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
FENDRR-205ENST00000598996 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
FENDRR-205ENST00000598996 SUPT5HO00267 1087 aaKnown RBP15.47■□□□□ 0.07
FENDRR-205ENST00000598996 DCAF1Q9Y4B6 1507 aa15.44■□□□□ 0.06
FENDRR-205ENST00000598996 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
FENDRR-205ENST00000598996 MYO15BQ96JP2 1530 aa15.05■□□□□ -0
FENDRR-205ENST00000598996 ABCC9O60706 1549 aa14.97□□□□□ -0.01
FENDRR-205ENST00000598996 SCRIBQ14160 1630 aa14.89□□□□□ -0.03
FENDRR-205ENST00000598996 NACADO15069 1562 aa14.77□□□□□ -0.04
FENDRR-205ENST00000598996 RSF1Q96T23 1441 aaPredicted RBP14.77□□□□□ -0.05
FENDRR-205ENST00000598996 RB1CC1Q8TDY2 1594 aa14.67□□□□□ -0.06
FENDRR-205ENST00000598996 HRCP23327 699 aa14.62□□□□□ -0.07
FENDRR-205ENST00000598996 LOC105371045A0A1W2PR82 267 aa14.6□□□□□ -0.07
FENDRR-205ENST00000598996 PCGF6Q9BYE7 350 aa14.57□□□□□ -0.08
FENDRR-205ENST00000598996 PHF23Q9BUL5 403 aaPredicted RBP14.55□□□□□ -0.08
FENDRR-205ENST00000598996 CECR2Q9BXF3 1484 aa14.54□□□□□ -0.08
FENDRR-205ENST00000598996 MROH2BQ7Z745 1585 aa14.52□□□□□ -0.09
FENDRR-205ENST00000598996 WIZO95785 1651 aa14.47□□□□□ -0.09
FENDRR-205ENST00000598996 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
FENDRR-205ENST00000598996 BAZ1AQ9NRL2 1556 aaPredicted RBP14.42□□□□□ -0.1
FENDRR-205ENST00000598996 UNC13AQ9UPW8 1703 aa14.37□□□□□ -0.11
FENDRR-205ENST00000598996 TRIM26Q12899 539 aaPredicted RBP14.37□□□□□ -0.11
FENDRR-205ENST00000598996 EIF4G1Q04637 1599 aaKnown RBP14.32□□□□□ -0.12
FENDRR-205ENST00000598996 SMARCA4P51532 1647 aa14.29□□□□□ -0.12
FENDRR-205ENST00000598996 FAM9AQ8IZU1 332 aaPredicted RBP14.27□□□□□ -0.12
FENDRR-205ENST00000598996 TOP2AP11388 1531 aaKnown RBP14.26□□□□□ -0.13
FENDRR-205ENST00000598996 PPARGC1BQ86YN6 1023 aaKnown RBP14.23□□□□□ -0.13
FENDRR-205ENST00000598996 EHMT2Q96KQ7 1210 aa14.19□□□□□ -0.14
FENDRR-205ENST00000598996 SMARCA2P51531 1590 aa14.18□□□□□ -0.14
FENDRR-205ENST00000598996 CCDC88BA6NC98 1476 aa14.15□□□□□ -0.14
FENDRR-205ENST00000598996 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
FENDRR-205ENST00000598996 BICRAQ9NZM4 1560 aa14.11□□□□□ -0.15
FENDRR-205ENST00000598996 ABCC8Q09428 1581 aa14.1□□□□□ -0.15
FENDRR-205ENST00000598996 ZEB1P37275 1124 aaPredicted RBP14.09□□□□□ -0.15
FENDRR-205ENST00000598996 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
FENDRR-205ENST00000598996 PABPN1Q86U42 306 aaKnown RBP eCLIP13.97□□□□□ -0.17
FENDRR-205ENST00000598996 EEA1Q15075 1411 aa13.96□□□□□ -0.17
FENDRR-205ENST00000598996 SOGA1O94964 1423 aa13.93□□□□□ -0.18
FENDRR-205ENST00000598996 WRNQ14191 1432 aaPredicted RBP eCLIP13.93□□□□□ -0.18
FENDRR-205ENST00000598996 SLC24A1O60721 1099 aa13.92□□□□□ -0.18
FENDRR-205ENST00000598996 TNIKQ9UKE5 1360 aa13.9□□□□□ -0.18
FENDRR-205ENST00000598996 CEP162Q5TB80 1403 aa13.89□□□□□ -0.19
FENDRR-205ENST00000598996 MYT1Q01538 1121 aa13.88□□□□□ -0.19
FENDRR-205ENST00000598996 ATAD2BQ9ULI0 1458 aa13.88□□□□□ -0.19
FENDRR-205ENST00000598996 RUSC2Q8N2Y8 1516 aa13.87□□□□□ -0.19
FENDRR-205ENST00000598996 CSRNP3Q8WYN3 585 aa13.86□□□□□ -0.19
FENDRR-205ENST00000598996 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
FENDRR-205ENST00000598996 SYNJ1O43426 1573 aa13.84□□□□□ -0.19
FENDRR-205ENST00000598996 GOLGA3Q08378 1498 aa13.83□□□□□ -0.2
FENDRR-205ENST00000598996 KIF21BO75037 1637 aa13.79□□□□□ -0.2
FENDRR-205ENST00000598996 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.21
FENDRR-205ENST00000598996 PLPPR3Q6T4P5 718 aa13.76□□□□□ -0.21
FENDRR-205ENST00000598996 CEP164Q9UPV0 1460 aa13.76□□□□□ -0.21
FENDRR-205ENST00000598996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.73□□□□□ -0.21
FENDRR-205ENST00000598996 CCER1Q8TC90 406 aaPredicted RBP13.71□□□□□ -0.21
FENDRR-205ENST00000598996 TOP2BQ02880 1626 aa13.7□□□□□ -0.22
FENDRR-205ENST00000598996 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
FENDRR-205ENST00000598996 HMGXB3Q12766 1538 aa13.67□□□□□ -0.22
FENDRR-205ENST00000598996 TTBK1Q5TCY1 1321 aaPredicted RBP13.65□□□□□ -0.23
FENDRR-205ENST00000598996 CLIP1P30622 1438 aa13.64□□□□□ -0.23
FENDRR-205ENST00000598996 NCAPD3P42695 1498 aa13.63□□□□□ -0.23
FENDRR-205ENST00000598996 RAPGEF2Q9Y4G8 1499 aa13.62□□□□□ -0.23
FENDRR-205ENST00000598996 VPS8Q8N3P4 1428 aa13.6□□□□□ -0.23
FENDRR-205ENST00000598996 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
FENDRR-205ENST00000598996 PRDM2Q13029 1718 aa13.55□□□□□ -0.24
FENDRR-205ENST00000598996 CUX1P39880 1505 aa13.53□□□□□ -0.24
FENDRR-205ENST00000598996 PRXQ9BXM0 1461 aa13.53□□□□□ -0.24
FENDRR-205ENST00000598996 CFTRP13569 1480 aa13.51□□□□□ -0.25
FENDRR-205ENST00000598996 KCNA4P22459 653 aa13.49□□□□□ -0.25
FENDRR-205ENST00000598996 APLP2Q06481 763 aa13.48□□□□□ -0.25
FENDRR-205ENST00000598996 KIF27Q86VH2 1401 aa13.46□□□□□ -0.25
FENDRR-205ENST00000598996 DIEXFQ68CQ4 756 aaKnown RBP13.45□□□□□ -0.26
FENDRR-205ENST00000598996 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
FENDRR-205ENST00000598996 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
FENDRR-205ENST00000598996 DNAJC5BQ9UF47 199 aa13.43□□□□□ -0.26
FENDRR-205ENST00000598996 SCAF1Q9H7N4 1312 aaKnown RBP13.42□□□□□ -0.26
FENDRR-205ENST00000598996 RANGAP1P46060 587 aaPredicted RBP13.4□□□□□ -0.26
FENDRR-205ENST00000598996 ZNF316A6NFI3 1004 aaPredicted RBP13.38□□□□□ -0.27
FENDRR-205ENST00000598996 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
FENDRR-205ENST00000598996 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
FENDRR-205ENST00000598996 ARHGAP35Q9NRY4 1499 aa13.33□□□□□ -0.28
FENDRR-205ENST00000598996 CUX2O14529 1486 aa13.31□□□□□ -0.28
FENDRR-205ENST00000598996 RRBP1Q9P2E9 1410 aaKnown RBP13.3□□□□□ -0.28
FENDRR-205ENST00000598996 NEUROD1Q13562 356 aa13.29□□□□□ -0.28
FENDRR-205ENST00000598996 KANK4Q5T7N3 995 aaPredicted RBP13.29□□□□□ -0.28
FENDRR-205ENST00000598996 CC2D2AQ9P2K1 1620 aa13.29□□□□□ -0.28
FENDRR-205ENST00000598996 CLSPNQ9HAW4 1339 aa13.29□□□□□ -0.28
FENDRR-205ENST00000598996 IGF1RP08069 1367 aa13.28□□□□□ -0.28
FENDRR-205ENST00000598996 CENPBP07199 599 aaPredicted RBP13.28□□□□□ -0.28
FENDRR-205ENST00000598996 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
FENDRR-205ENST00000598996 DHX57Q6P158 1386 aaKnown RBP13.25□□□□□ -0.29
FENDRR-205ENST00000598996 MAP3K1Q13233 1512 aa13.24□□□□□ -0.29
FENDRR-205ENST00000598996 CARMIL1Q5VZK9 1371 aa13.23□□□□□ -0.29
FENDRR-205ENST00000598996 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
FENDRR-205ENST00000598996 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.3
FENDRR-205ENST00000598996 FANCD2Q9BXW9 1451 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms