RNA–Protein interactions for RNA: ENST00000594553.1

SIPA1L3-203, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-203ENST00000594553 AEBP2Q6ZN18 517 aaPredicted RBP10.19□□□□□ -0.78
SIPA1L3-203ENST00000594553 NISCHQ9Y2I1 1504 aa9.58□□□□□ -0.88
SIPA1L3-203ENST00000594553 CHIC1Q5VXU3 224 aa9.56□□□□□ -0.88
SIPA1L3-203ENST00000594553 DNAJC5BQ9UF47 199 aa8.93□□□□□ -0.98
SIPA1L3-203ENST00000594553 SENP3Q9H4L4 574 aaPredicted RBP8.79□□□□□ -1
SIPA1L3-203ENST00000594553 ABCC9O60706 1549 aa8.75□□□□□ -1.01
SIPA1L3-203ENST00000594553 PHF23Q9BUL5 403 aaPredicted RBP8.6□□□□□ -1.03
SIPA1L3-203ENST00000594553 DNAJC5Q9H3Z4 198 aa8.6□□□□□ -1.03
SIPA1L3-203ENST00000594553 CCDC180Q9P1Z9 1646 aa8.25□□□□□ -1.09
SIPA1L3-203ENST00000594553 FOXD1Q16676 465 aa8.19□□□□□ -1.1
SIPA1L3-203ENST00000594553 POTEDQ86YR6 584 aa8.13□□□□□ -1.11
SIPA1L3-203ENST00000594553 PABPN1Q86U42 306 aaKnown RBP eCLIP8.03□□□□□ -1.12
SIPA1L3-203ENST00000594553 ZCCHC6Q5VYS8 1495 aaKnown RBP8.01□□□□□ -1.13
SIPA1L3-203ENST00000594553 UNC13AQ9UPW8 1703 aa8.01□□□□□ -1.13
SIPA1L3-203ENST00000594553 DCAF8L2P0C7V8 631 aa7.97□□□□□ -1.13
SIPA1L3-203ENST00000594553 DCAF1Q9Y4B6 1507 aa7.97□□□□□ -1.13
SIPA1L3-203ENST00000594553 RB1CC1Q8TDY2 1594 aa7.97□□□□□ -1.13
SIPA1L3-203ENST00000594553 CECR2Q9BXF3 1484 aa7.93□□□□□ -1.14
SIPA1L3-203ENST00000594553 TRIM41Q8WV44 630 aa7.91□□□□□ -1.14
SIPA1L3-203ENST00000594553 MYO15BQ96JP2 1530 aa7.91□□□□□ -1.14
SIPA1L3-203ENST00000594553 CC2D2AQ9P2K1 1620 aa7.91□□□□□ -1.14
SIPA1L3-203ENST00000594553 BICRAQ9NZM4 1560 aa7.9□□□□□ -1.14
SIPA1L3-203ENST00000594553 MSH5O43196 834 aa7.83□□□□□ -1.16
SIPA1L3-203ENST00000594553 NACADO15069 1562 aa7.8□□□□□ -1.16
SIPA1L3-203ENST00000594553 CUX2O14529 1486 aa7.76□□□□□ -1.17
SIPA1L3-203ENST00000594553 SHROOM4Q9ULL8 1493 aa7.74□□□□□ -1.17
SIPA1L3-203ENST00000594553 EIF4G1Q04637 1599 aaKnown RBP7.69□□□□□ -1.18
SIPA1L3-203ENST00000594553 PIAS4Q8N2W9 510 aaPredicted RBP7.57□□□□□ -1.2
SIPA1L3-203ENST00000594553 SCRIBQ14160 1630 aa7.54□□□□□ -1.2
SIPA1L3-203ENST00000594553 SUPT5HO00267 1087 aaKnown RBP7.53□□□□□ -1.2
SIPA1L3-203ENST00000594553 ERCC6Q03468 1493 aa7.51□□□□□ -1.21
SIPA1L3-203ENST00000594553 ILDR1Q86SU0 546 aaPredicted RBP7.5□□□□□ -1.21
SIPA1L3-203ENST00000594553 RSF1Q96T23 1441 aaPredicted RBP7.46□□□□□ -1.21
SIPA1L3-203ENST00000594553 THOC2Q8NI27 1593 aaKnown RBP7.45□□□□□ -1.22
SIPA1L3-203ENST00000594553 PPP6R1Q9UPN7 881 aa7.4□□□□□ -1.22
SIPA1L3-203ENST00000594553 RIMBP3CA6NJZ7 1639 aa7.38□□□□□ -1.23
SIPA1L3-203ENST00000594553 RIMBP3BA6NNM3 1639 aa7.38□□□□□ -1.23
SIPA1L3-203ENST00000594553 RIMBP3Q9UFD9 1639 aa7.38□□□□□ -1.23
SIPA1L3-203ENST00000594553 BAZ1AQ9NRL2 1556 aaPredicted RBP7.38□□□□□ -1.23
SIPA1L3-203ENST00000594553 PLPPR3Q6T4P5 718 aa7.38□□□□□ -1.23
SIPA1L3-203ENST00000594553 NESP48681 1621 aa7.38□□□□□ -1.23
SIPA1L3-203ENST00000594553 MROH2BQ7Z745 1585 aa7.36□□□□□ -1.23
SIPA1L3-203ENST00000594553 ADRA2BP18089 450 aa7.35□□□□□ -1.23
SIPA1L3-203ENST00000594553 KIF21AQ7Z4S6 1674 aa7.3□□□□□ -1.24
SIPA1L3-203ENST00000594553 SMARCA4P51532 1647 aa7.28□□□□□ -1.24
SIPA1L3-203ENST00000594553 TRHP20396 242 aaPredicted RBP7.27□□□□□ -1.25
SIPA1L3-203ENST00000594553 ATAD2BQ9ULI0 1458 aa7.27□□□□□ -1.25
SIPA1L3-203ENST00000594553 SMARCA2P51531 1590 aa7.27□□□□□ -1.25
SIPA1L3-203ENST00000594553 PEG3Q9GZU2 1588 aa7.27□□□□□ -1.25
SIPA1L3-203ENST00000594553 NCAPD3P42695 1498 aa7.26□□□□□ -1.25
SIPA1L3-203ENST00000594553 OSCARQ8IYS5 282 aa7.26□□□□□ -1.25
SIPA1L3-203ENST00000594553 ARHGEF11O15085 1522 aa7.24□□□□□ -1.25
SIPA1L3-203ENST00000594553 WIZO95785 1651 aa7.22□□□□□ -1.25
SIPA1L3-203ENST00000594553 TOP2AP11388 1531 aaKnown RBP7.22□□□□□ -1.25
SIPA1L3-203ENST00000594553 CCDC88BA6NC98 1476 aa7.2□□□□□ -1.26
SIPA1L3-203ENST00000594553 BAZ1BQ9UIG0 1483 aaKnown RBP7.18□□□□□ -1.26
SIPA1L3-203ENST00000594553 CYB5RLQ6IPT4 315 aa7.18□□□□□ -1.26
SIPA1L3-203ENST00000594553 HMGXB3Q12766 1538 aa7.15□□□□□ -1.27
SIPA1L3-203ENST00000594553 ARAP1Q96P48 1450 aa7.14□□□□□ -1.27
SIPA1L3-203ENST00000594553 WDR62O43379 1518 aa7.12□□□□□ -1.27
SIPA1L3-203ENST00000594553 LAMC3Q9Y6N6 1575 aa7.12□□□□□ -1.27
SIPA1L3-203ENST00000594553 CADPSQ9ULU8 1353 aa7.08□□□□□ -1.28
SIPA1L3-203ENST00000594553 CFTRP13569 1480 aa7.06□□□□□ -1.28
SIPA1L3-203ENST00000594553 MRC2Q9UBG0 1479 aa7.06□□□□□ -1.28
SIPA1L3-203ENST00000594553 KDM4FA0A1W2PPD8 638 aa7.03□□□□□ -1.28
SIPA1L3-203ENST00000594553 PDS5BQ9NTI5 1447 aa7.02□□□□□ -1.29
SIPA1L3-203ENST00000594553 ILDR2Q71H61 639 aa7.02□□□□□ -1.29
SIPA1L3-203ENST00000594553 LMTK3Q96Q04 1460 aa7.01□□□□□ -1.29
SIPA1L3-203ENST00000594553 WRNQ14191 1432 aaPredicted RBP eCLIP7.01□□□□□ -1.29
SIPA1L3-203ENST00000594553 CHD1O14646 1710 aa6.98□□□□□ -1.29
SIPA1L3-203ENST00000594553 SOCS7O14512 581 aa6.98□□□□□ -1.29
SIPA1L3-203ENST00000594553 CSRNP3Q8WYN3 585 aa6.97□□□□□ -1.29
SIPA1L3-203ENST00000594553 EEA1Q15075 1411 aa6.96□□□□□ -1.3
SIPA1L3-203ENST00000594553 LOC105371045A0A1W2PR82 267 aa6.96□□□□□ -1.3
SIPA1L3-203ENST00000594553 ERCC6L2Q5T890 1561 aa6.95□□□□□ -1.3
SIPA1L3-203ENST00000594553 HECW2Q9P2P5 1572 aa6.95□□□□□ -1.3
SIPA1L3-203ENST00000594553 KIF13AQ9H1H9 1805 aa6.94□□□□□ -1.3
SIPA1L3-203ENST00000594553 FBXO41Q8TF61 875 aa6.94□□□□□ -1.3
SIPA1L3-203ENST00000594553 ZNF608Q9ULD9 1512 aaPredicted RBP6.93□□□□□ -1.3
SIPA1L3-203ENST00000594553 FAM9AQ8IZU1 332 aaPredicted RBP6.93□□□□□ -1.3
SIPA1L3-203ENST00000594553 ABCC8Q09428 1581 aa6.92□□□□□ -1.3
SIPA1L3-203ENST00000594553 DMRT2Q9Y5R5 561 aa6.92□□□□□ -1.3
SIPA1L3-203ENST00000594553 FANCD2Q9BXW9 1451 aa6.92□□□□□ -1.3
SIPA1L3-203ENST00000594553 SOGA1O94964 1423 aa6.9□□□□□ -1.31
SIPA1L3-203ENST00000594553 URB2Q14146 1524 aaKnown RBP6.89□□□□□ -1.31
SIPA1L3-203ENST00000594553 TOP2BQ02880 1626 aa6.89□□□□□ -1.31
SIPA1L3-203ENST00000594553 CEP164Q9UPV0 1460 aa6.88□□□□□ -1.31
SIPA1L3-203ENST00000594553 CUX1P39880 1505 aa6.87□□□□□ -1.31
SIPA1L3-203ENST00000594553 SYNJ1O43426 1573 aa6.86□□□□□ -1.31
SIPA1L3-203ENST00000594553 KIF27Q86VH2 1401 aa6.86□□□□□ -1.31
SIPA1L3-203ENST00000594553 CACNB1Q02641 598 aaPredicted RBP6.86□□□□□ -1.31
SIPA1L3-203ENST00000594553 EIF4G3O43432 1585 aaKnown RBP6.85□□□□□ -1.31
SIPA1L3-203ENST00000594553 IGF1RP08069 1367 aa6.84□□□□□ -1.31
SIPA1L3-203ENST00000594553 TNIKQ9UKE5 1360 aa6.84□□□□□ -1.31
SIPA1L3-203ENST00000594553 RUSC2Q8N2Y8 1516 aa6.84□□□□□ -1.31
SIPA1L3-203ENST00000594553 BIVM-ERCC5R4GMW8 1640 aa6.83□□□□□ -1.32
SIPA1L3-203ENST00000594553 CLASP1Q7Z460 1538 aa6.83□□□□□ -1.32
SIPA1L3-203ENST00000594553 UBTFP17480 764 aaKnown RBP6.83□□□□□ -1.32
SIPA1L3-203ENST00000594553 MAPK8IP2Q13387 824 aaPredicted RBP6.83□□□□□ -1.32
SIPA1L3-203ENST00000594553 TOPBP1Q92547 1522 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms