RNA–Protein interactions for RNA: ENST00000593172.5

PALM-210, Transcript of paralemmin, humanhuman

TSL 2

Gene PALM, Length 2,489 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-210ENST00000593172 NISCHQ9Y2I1 1504 aa41.69■■■■■ 4.26
PALM-210ENST00000593172 SHROOM4Q9ULL8 1493 aa35.6■■■■□ 3.29
PALM-210ENST00000593172 CCDC180Q9P1Z9 1646 aa35.43■■■■□ 3.26
PALM-210ENST00000593172 ZCCHC6Q5VYS8 1495 aaKnown RBP35.25■■■■□ 3.23
PALM-210ENST00000593172 SUPT5HO00267 1087 aaKnown RBP34.83■■■■□ 3.17
PALM-210ENST00000593172 DCAF8L2P0C7V8 631 aa34.65■■■■□ 3.14
PALM-210ENST00000593172 DCAF1Q9Y4B6 1507 aa34.13■■■■□ 3.05
PALM-210ENST00000593172 CHIC1Q5VXU3 224 aa33.81■■■■□ 3
PALM-210ENST00000593172 MYO15BQ96JP2 1530 aa33.75■■■□□ 2.99
PALM-210ENST00000593172 SCRIBQ14160 1630 aa33.31■■■□□ 2.92
PALM-210ENST00000593172 ABCC9O60706 1549 aa33.25■■■□□ 2.91
PALM-210ENST00000593172 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
PALM-210ENST00000593172 LOC105371045A0A1W2PR82 267 aa32.87■■■□□ 2.85
PALM-210ENST00000593172 NACADO15069 1562 aa32.77■■■□□ 2.84
PALM-210ENST00000593172 PCGF6Q9BYE7 350 aa32.7■■■□□ 2.82
PALM-210ENST00000593172 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
PALM-210ENST00000593172 CECR2Q9BXF3 1484 aa32.61■■■□□ 2.81
PALM-210ENST00000593172 HRCP23327 699 aa32.59■■■□□ 2.81
PALM-210ENST00000593172 MROH2BQ7Z745 1585 aa32.47■■■□□ 2.79
PALM-210ENST00000593172 TRIM41Q8WV44 630 aa32.39■■■□□ 2.78
PALM-210ENST00000593172 WIZO95785 1651 aa32.32■■■□□ 2.76
PALM-210ENST00000593172 FAM9AQ8IZU1 332 aaPredicted RBP32.22■■■□□ 2.75
PALM-210ENST00000593172 PPARGC1BQ86YN6 1023 aaKnown RBP32.07■■■□□ 2.72
PALM-210ENST00000593172 BAZ1AQ9NRL2 1556 aaPredicted RBP32.02■■■□□ 2.72
PALM-210ENST00000593172 TRIM26Q12899 539 aaPredicted RBP32.02■■■□□ 2.72
PALM-210ENST00000593172 EHMT2Q96KQ7 1210 aa32.01■■■□□ 2.72
PALM-210ENST00000593172 UNC13AQ9UPW8 1703 aa31.92■■■□□ 2.7
PALM-210ENST00000593172 EIF4G1Q04637 1599 aaKnown RBP31.82■■■□□ 2.68
PALM-210ENST00000593172 SMARCA4P51532 1647 aa31.78■■■□□ 2.68
PALM-210ENST00000593172 TOP2AP11388 1531 aaKnown RBP31.72■■■□□ 2.67
PALM-210ENST00000593172 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
PALM-210ENST00000593172 SMARCA2P51531 1590 aa31.59■■■□□ 2.65
PALM-210ENST00000593172 ABCC8Q09428 1581 aa31.58■■■□□ 2.65
PALM-210ENST00000593172 PABPN1Q86U42 306 aaKnown RBP eCLIP31.57■■■□□ 2.64
PALM-210ENST00000593172 BICRAQ9NZM4 1560 aa31.49■■■□□ 2.63
PALM-210ENST00000593172 SOGA1O94964 1423 aa31.25■■■□□ 2.59
PALM-210ENST00000593172 ZEB1P37275 1124 aaPredicted RBP31.17■■■□□ 2.58
PALM-210ENST00000593172 RUSC2Q8N2Y8 1516 aa31.14■■■□□ 2.58
PALM-210ENST00000593172 PEG3Q9GZU2 1588 aa31.13■■■□□ 2.57
PALM-210ENST00000593172 CEP162Q5TB80 1403 aa31.01■■■□□ 2.55
PALM-210ENST00000593172 CSRNP3Q8WYN3 585 aa30.99■■■□□ 2.55
PALM-210ENST00000593172 ATAD2BQ9ULI0 1458 aa30.98■■■□□ 2.55
PALM-210ENST00000593172 WRNQ14191 1432 aaPredicted RBP eCLIP30.96■■■□□ 2.55
PALM-210ENST00000593172 TTBK1Q5TCY1 1321 aaPredicted RBP30.94■■■□□ 2.54
PALM-210ENST00000593172 TNIKQ9UKE5 1360 aa30.93■■■□□ 2.54
PALM-210ENST00000593172 EEA1Q15075 1411 aa30.91■■■□□ 2.54
PALM-210ENST00000593172 SYNJ1O43426 1573 aa30.89■■■□□ 2.53
PALM-210ENST00000593172 UBTFP17480 764 aaKnown RBP30.87■■■□□ 2.53
PALM-210ENST00000593172 BAZ1BQ9UIG0 1483 aaKnown RBP30.87■■■□□ 2.53
PALM-210ENST00000593172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.86■■■□□ 2.53
PALM-210ENST00000593172 GOLGA3Q08378 1498 aa30.77■■■□□ 2.52
PALM-210ENST00000593172 CCER1Q8TC90 406 aaPredicted RBP30.69■■■□□ 2.5
PALM-210ENST00000593172 CEP164Q9UPV0 1460 aa30.59■■■□□ 2.49
PALM-210ENST00000593172 KIF21BO75037 1637 aa30.57■■■□□ 2.48
PALM-210ENST00000593172 RAPGEF2Q9Y4G8 1499 aa30.47■■■□□ 2.47
PALM-210ENST00000593172 TOP2BQ02880 1626 aa30.45■■■□□ 2.46
PALM-210ENST00000593172 CLIP1P30622 1438 aa30.43■■■□□ 2.46
PALM-210ENST00000593172 RANGAP1P46060 587 aaPredicted RBP30.38■■■□□ 2.45
PALM-210ENST00000593172 NCAPD3P42695 1498 aa30.35■■■□□ 2.45
PALM-210ENST00000593172 BIVM-ERCC5R4GMW8 1640 aa30.34■■■□□ 2.45
PALM-210ENST00000593172 HMGXB3Q12766 1538 aa30.33■■■□□ 2.45
PALM-210ENST00000593172 VPS8Q8N3P4 1428 aa30.28■■■□□ 2.44
PALM-210ENST00000593172 CUX1P39880 1505 aa30.22■■■□□ 2.43
PALM-210ENST00000593172 HNRNPUL2Q1KMD3 747 aaKnown RBP30.19■■■□□ 2.42
PALM-210ENST00000593172 PRXQ9BXM0 1461 aa30.13■■■□□ 2.41
PALM-210ENST00000593172 CFTRP13569 1480 aa30.11■■■□□ 2.41
PALM-210ENST00000593172 SCAF1Q9H7N4 1312 aaKnown RBP30.1■■■□□ 2.41
PALM-210ENST00000593172 APLP2Q06481 763 aa30.08■■■□□ 2.41
PALM-210ENST00000593172 ERICH3Q5RHP9 1530 aa30.07■■■□□ 2.4
PALM-210ENST00000593172 DIEXFQ68CQ4 756 aaKnown RBP30.04■■■□□ 2.4
PALM-210ENST00000593172 ARAP1Q96P48 1450 aa30■■■□□ 2.39
PALM-210ENST00000593172 KIF27Q86VH2 1401 aa29.98■■■□□ 2.39
PALM-210ENST00000593172 PELP1Q8IZL8 1130 aaKnown RBP29.97■■■□□ 2.39
PALM-210ENST00000593172 KANK4Q5T7N3 995 aaPredicted RBP29.87■■■□□ 2.37
PALM-210ENST00000593172 PRDM2Q13029 1718 aa29.86■■■□□ 2.37
PALM-210ENST00000593172 ZNF316A6NFI3 1004 aaPredicted RBP29.83■■■□□ 2.37
PALM-210ENST00000593172 CADPSQ9ULU8 1353 aa29.78■■■□□ 2.36
PALM-210ENST00000593172 CUX2O14529 1486 aa29.76■■■□□ 2.36
PALM-210ENST00000593172 NEUROD1Q13562 356 aa29.76■■■□□ 2.35
PALM-210ENST00000593172 ARHGAP35Q9NRY4 1499 aa29.75■■■□□ 2.35
PALM-210ENST00000593172 ACIN1Q9UKV3 1341 aaKnown RBP29.73■■■□□ 2.35
PALM-210ENST00000593172 IGF1RP08069 1367 aa29.71■■■□□ 2.35
PALM-210ENST00000593172 CC2D2AQ9P2K1 1620 aa29.69■■■□□ 2.34
PALM-210ENST00000593172 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
PALM-210ENST00000593172 CARMIL1Q5VZK9 1371 aa29.57■■■□□ 2.32
PALM-210ENST00000593172 DHX57Q6P158 1386 aaKnown RBP29.56■■■□□ 2.32
PALM-210ENST00000593172 RRBP1Q9P2E9 1410 aaKnown RBP29.56■■■□□ 2.32
PALM-210ENST00000593172 CENPBP07199 599 aaPredicted RBP29.52■■■□□ 2.32
PALM-210ENST00000593172 FANCD2Q9BXW9 1451 aa29.51■■■□□ 2.32
PALM-210ENST00000593172 MIER1Q8N108 512 aa29.46■■■□□ 2.31
PALM-210ENST00000593172 CCNB3Q8WWL7 1395 aa29.45■■■□□ 2.31
PALM-210ENST00000593172 ITGAEP38570 1179 aa29.44■■■□□ 2.3
PALM-210ENST00000593172 RAD54L2Q9Y4B4 1467 aa29.43■■■□□ 2.3
PALM-210ENST00000593172 NESP48681 1621 aa29.43■■■□□ 2.3
PALM-210ENST00000593172 GTF3C3Q9Y5Q9 886 aa29.41■■■□□ 2.3
PALM-210ENST00000593172 YTHDC1Q96MU7 727 aaKnown RBP29.39■■■□□ 2.3
PALM-210ENST00000593172 TIAM1Q13009 1591 aa29.39■■■□□ 2.3
PALM-210ENST00000593172 P3H3Q8IVL6 736 aa29.37■■■□□ 2.29
PALM-210ENST00000593172 CLSPNQ9HAW4 1339 aa29.37■■■□□ 2.29
PALM-210ENST00000593172 DNMBPQ6XZF7 1577 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms