RNA–Protein interactions for RNA: ENST00000592495.1

ZNF439-204, Transcript of zinc finger protein 439, humanhuman

Gene ZNF439, Length 2,385 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439-204ENST00000592495 NISCHQ9Y2I1 1504 aa40.67■■■■■ 4.1
ZNF439-204ENST00000592495 CCDC180Q9P1Z9 1646 aa35.07■■■■□ 3.2
ZNF439-204ENST00000592495 ZCCHC6Q5VYS8 1495 aaKnown RBP34.28■■■■□ 3.08
ZNF439-204ENST00000592495 SHROOM4Q9ULL8 1493 aa33.87■■■■□ 3.01
ZNF439-204ENST00000592495 DCAF8L2P0C7V8 631 aa33.61■■■□□ 2.97
ZNF439-204ENST00000592495 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
ZNF439-204ENST00000592495 SUPT5HO00267 1087 aaKnown RBP33.38■■■□□ 2.93
ZNF439-204ENST00000592495 HRCP23327 699 aa33.3■■■□□ 2.92
ZNF439-204ENST00000592495 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
ZNF439-204ENST00000592495 ABCC9O60706 1549 aa32.93■■■□□ 2.86
ZNF439-204ENST00000592495 CHIC1Q5VXU3 224 aa32.88■■■□□ 2.85
ZNF439-204ENST00000592495 PCGF6Q9BYE7 350 aa32.68■■■□□ 2.82
ZNF439-204ENST00000592495 SCRIBQ14160 1630 aa32.57■■■□□ 2.8
ZNF439-204ENST00000592495 NACADO15069 1562 aa32.53■■■□□ 2.8
ZNF439-204ENST00000592495 PPARGC1BQ86YN6 1023 aaKnown RBP32.41■■■□□ 2.78
ZNF439-204ENST00000592495 RB1CC1Q8TDY2 1594 aa32.15■■■□□ 2.74
ZNF439-204ENST00000592495 LOC105371045A0A1W2PR82 267 aa31.93■■■□□ 2.7
ZNF439-204ENST00000592495 TRIM26Q12899 539 aaPredicted RBP31.92■■■□□ 2.7
ZNF439-204ENST00000592495 RSF1Q96T23 1441 aaPredicted RBP31.83■■■□□ 2.69
ZNF439-204ENST00000592495 UNC13AQ9UPW8 1703 aa31.74■■■□□ 2.67
ZNF439-204ENST00000592495 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
ZNF439-204ENST00000592495 PELP1Q8IZL8 1130 aaKnown RBP31.64■■■□□ 2.66
ZNF439-204ENST00000592495 ZEB1P37275 1124 aaPredicted RBP31.62■■■□□ 2.65
ZNF439-204ENST00000592495 MROH2BQ7Z745 1585 aa31.55■■■□□ 2.64
ZNF439-204ENST00000592495 WIZO95785 1651 aa31.36■■■□□ 2.61
ZNF439-204ENST00000592495 BICRAQ9NZM4 1560 aa31.34■■■□□ 2.61
ZNF439-204ENST00000592495 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
ZNF439-204ENST00000592495 PABPN1Q86U42 306 aaKnown RBP eCLIP31.23■■■□□ 2.59
ZNF439-204ENST00000592495 SCAF1Q9H7N4 1312 aaKnown RBP31.18■■■□□ 2.58
ZNF439-204ENST00000592495 SMARCA4P51532 1647 aa31.16■■■□□ 2.58
ZNF439-204ENST00000592495 TRIM41Q8WV44 630 aa31.05■■■□□ 2.56
ZNF439-204ENST00000592495 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
ZNF439-204ENST00000592495 FAM9AQ8IZU1 332 aaPredicted RBP30.8■■■□□ 2.52
ZNF439-204ENST00000592495 EIF4G1Q04637 1599 aaKnown RBP30.69■■■□□ 2.5
ZNF439-204ENST00000592495 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
ZNF439-204ENST00000592495 CCDC88BA6NC98 1476 aa30.67■■■□□ 2.5
ZNF439-204ENST00000592495 PEG3Q9GZU2 1588 aa30.67■■■□□ 2.5
ZNF439-204ENST00000592495 ACIN1Q9UKV3 1341 aaKnown RBP30.63■■■□□ 2.49
ZNF439-204ENST00000592495 ATAD2BQ9ULI0 1458 aa30.51■■■□□ 2.47
ZNF439-204ENST00000592495 EHMT2Q96KQ7 1210 aa30.49■■■□□ 2.47
ZNF439-204ENST00000592495 NEUROD1Q13562 356 aa30.48■■■□□ 2.47
ZNF439-204ENST00000592495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
ZNF439-204ENST00000592495 CCER1Q8TC90 406 aaPredicted RBP30.42■■■□□ 2.46
ZNF439-204ENST00000592495 BAZ1BQ9UIG0 1483 aaKnown RBP30.35■■■□□ 2.45
ZNF439-204ENST00000592495 CENPBP07199 599 aaPredicted RBP30.34■■■□□ 2.45
ZNF439-204ENST00000592495 MYT1Q01538 1121 aa30.34■■■□□ 2.45
ZNF439-204ENST00000592495 ABCC8Q09428 1581 aa30.33■■■□□ 2.45
ZNF439-204ENST00000592495 DIEXFQ68CQ4 756 aaKnown RBP30.3■■■□□ 2.44
ZNF439-204ENST00000592495 GTF3C3Q9Y5Q9 886 aa30.27■■■□□ 2.44
ZNF439-204ENST00000592495 WRNQ14191 1432 aaPredicted RBP eCLIP30.08■■■□□ 2.41
ZNF439-204ENST00000592495 NCAPD3P42695 1498 aa30.08■■■□□ 2.41
ZNF439-204ENST00000592495 HMGXB3Q12766 1538 aa30.06■■■□□ 2.4
ZNF439-204ENST00000592495 ZNF316A6NFI3 1004 aaPredicted RBP29.88■■■□□ 2.37
ZNF439-204ENST00000592495 SOGA1O94964 1423 aa29.85■■■□□ 2.37
ZNF439-204ENST00000592495 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
ZNF439-204ENST00000592495 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
ZNF439-204ENST00000592495 TNIKQ9UKE5 1360 aa29.76■■■□□ 2.36
ZNF439-204ENST00000592495 RUSC2Q8N2Y8 1516 aa29.76■■■□□ 2.35
ZNF439-204ENST00000592495 TTBK1Q5TCY1 1321 aaPredicted RBP29.74■■■□□ 2.35
ZNF439-204ENST00000592495 CC2D2AQ9P2K1 1620 aa29.74■■■□□ 2.35
ZNF439-204ENST00000592495 CFTRP13569 1480 aa29.61■■■□□ 2.33
ZNF439-204ENST00000592495 EEA1Q15075 1411 aa29.61■■■□□ 2.33
ZNF439-204ENST00000592495 YTHDC1Q96MU7 727 aaKnown RBP29.59■■■□□ 2.33
ZNF439-204ENST00000592495 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
ZNF439-204ENST00000592495 CSRNP3Q8WYN3 585 aa29.55■■■□□ 2.32
ZNF439-204ENST00000592495 MIER1Q8N108 512 aa29.53■■■□□ 2.32
ZNF439-204ENST00000592495 BIVM-ERCC5R4GMW8 1640 aa29.52■■■□□ 2.32
ZNF439-204ENST00000592495 UBTFP17480 764 aaKnown RBP29.46■■■□□ 2.31
ZNF439-204ENST00000592495 PRDM2Q13029 1718 aa29.45■■■□□ 2.31
ZNF439-204ENST00000592495 CUX1P39880 1505 aa29.44■■■□□ 2.3
ZNF439-204ENST00000592495 GOLGA3Q08378 1498 aa29.43■■■□□ 2.3
ZNF439-204ENST00000592495 CADPSQ9ULU8 1353 aa29.38■■■□□ 2.29
ZNF439-204ENST00000592495 KIF21BO75037 1637 aa29.3■■■□□ 2.28
ZNF439-204ENST00000592495 HNRNPUL2Q1KMD3 747 aaKnown RBP29.28■■■□□ 2.28
ZNF439-204ENST00000592495 CEP164Q9UPV0 1460 aa29.28■■■□□ 2.28
ZNF439-204ENST00000592495 RAPGEF2Q9Y4G8 1499 aa29.18■■■□□ 2.26
ZNF439-204ENST00000592495 CLSPNQ9HAW4 1339 aa29.18■■■□□ 2.26
ZNF439-204ENST00000592495 NESP48681 1621 aa29.14■■■□□ 2.26
ZNF439-204ENST00000592495 CLIP1P30622 1438 aa29.12■■■□□ 2.25
ZNF439-204ENST00000592495 VPS8Q8N3P4 1428 aa29.11■■■□□ 2.25
ZNF439-204ENST00000592495 DNAJC5BQ9UF47 199 aa29.11■■■□□ 2.25
ZNF439-204ENST00000592495 FANCD2Q9BXW9 1451 aa29.1■■■□□ 2.25
ZNF439-204ENST00000592495 PRXQ9BXM0 1461 aa29.04■■■□□ 2.24
ZNF439-204ENST00000592495 KIF27Q86VH2 1401 aa29.04■■■□□ 2.24
ZNF439-204ENST00000592495 FGD5Q6ZNL6 1462 aa29.01■■■□□ 2.23
ZNF439-204ENST00000592495 APLP2Q06481 763 aa29.01■■■□□ 2.23
ZNF439-204ENST00000592495 SUPT16HQ9Y5B9 1047 aaKnown RBP28.97■■■□□ 2.23
ZNF439-204ENST00000592495 ERICH3Q5RHP9 1530 aa28.97■■■□□ 2.23
ZNF439-204ENST00000592495 LAMC3Q9Y6N6 1575 aa28.94■■■□□ 2.22
ZNF439-204ENST00000592495 CUX2O14529 1486 aa28.92■■■□□ 2.22
ZNF439-204ENST00000592495 DNMBPQ6XZF7 1577 aa28.89■■■□□ 2.22
ZNF439-204ENST00000592495 DHX57Q6P158 1386 aaKnown RBP28.87■■■□□ 2.21
ZNF439-204ENST00000592495 TOPBP1Q92547 1522 aa28.86■■■□□ 2.21
ZNF439-204ENST00000592495 RANGAP1P46060 587 aaPredicted RBP28.83■■■□□ 2.21
ZNF439-204ENST00000592495 IGF1RP08069 1367 aa28.8■■■□□ 2.2
ZNF439-204ENST00000592495 POLA1P09884 1462 aaPredicted RBP28.79■■■□□ 2.2
ZNF439-204ENST00000592495 RAD54L2Q9Y4B4 1467 aa28.78■■■□□ 2.2
ZNF439-204ENST00000592495 URB2Q14146 1524 aaKnown RBP28.76■■■□□ 2.19
ZNF439-204ENST00000592495 TSHZ2Q9NRE2 1034 aa28.73■■■□□ 2.19
ZNF439-204ENST00000592495 KIF21AQ7Z4S6 1674 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms