RNA–Protein interactions for RNA: ENST00000590657.1

LINC00665-207, long intergenic non-protein coding RNA 665, humanhuman

Gene LINC00665, Length 2,671 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00665-207ENST00000590657 NISCHQ9Y2I1 1504 aa11.82□□□□□ -0.52
LINC00665-207ENST00000590657 CHIC1Q5VXU3 224 aa11.56□□□□□ -0.56
LINC00665-207ENST00000590657 AEBP2Q6ZN18 517 aaPredicted RBP11.16□□□□□ -0.62
LINC00665-207ENST00000590657 ABCC9O60706 1549 aa11.09□□□□□ -0.63
LINC00665-207ENST00000590657 CCDC180Q9P1Z9 1646 aa11□□□□□ -0.65
LINC00665-207ENST00000590657 SLC24A1O60721 1099 aa10.81□□□□□ -0.68
LINC00665-207ENST00000590657 DNAJC5BQ9UF47 199 aa10.79□□□□□ -0.68
LINC00665-207ENST00000590657 EHMT2Q96KQ7 1210 aa10.61□□□□□ -0.71
LINC00665-207ENST00000590657 RB1CC1Q8TDY2 1594 aa10.6□□□□□ -0.71
LINC00665-207ENST00000590657 PHF23Q9BUL5 403 aaPredicted RBP10.46□□□□□ -0.74
LINC00665-207ENST00000590657 NACADO15069 1562 aa10.45□□□□□ -0.74
LINC00665-207ENST00000590657 DNAJC5Q9H3Z4 198 aa10.41□□□□□ -0.74
LINC00665-207ENST00000590657 SHROOM4Q9ULL8 1493 aa10.32□□□□□ -0.76
LINC00665-207ENST00000590657 UNC13AQ9UPW8 1703 aa10.32□□□□□ -0.76
LINC00665-207ENST00000590657 MYO15BQ96JP2 1530 aa10.28□□□□□ -0.76
LINC00665-207ENST00000590657 BICRAQ9NZM4 1560 aa10.26□□□□□ -0.77
LINC00665-207ENST00000590657 PLPPR3Q6T4P5 718 aa10.17□□□□□ -0.78
LINC00665-207ENST00000590657 CECR2Q9BXF3 1484 aa10.14□□□□□ -0.79
LINC00665-207ENST00000590657 CC2D2AQ9P2K1 1620 aa10.13□□□□□ -0.79
LINC00665-207ENST00000590657 PABPN1Q86U42 306 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00665-207ENST00000590657 POTEDQ86YR6 584 aa10.1□□□□□ -0.79
LINC00665-207ENST00000590657 RTN4Q9NQC3 1192 aaKnown RBP10.04□□□□□ -0.8
LINC00665-207ENST00000590657 CUX2O14529 1486 aa10.03□□□□□ -0.8
LINC00665-207ENST00000590657 EIF4G1Q04637 1599 aaKnown RBP10.02□□□□□ -0.81
LINC00665-207ENST00000590657 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
LINC00665-207ENST00000590657 CSRNP3Q8WYN3 585 aa9.94□□□□□ -0.82
LINC00665-207ENST00000590657 KCNA4P22459 653 aa9.92□□□□□ -0.82
LINC00665-207ENST00000590657 DCAF1Q9Y4B6 1507 aa9.92□□□□□ -0.82
LINC00665-207ENST00000590657 MYT1Q01538 1121 aa9.82□□□□□ -0.84
LINC00665-207ENST00000590657 AMER1Q5JTC6 1135 aaPredicted RBP9.78□□□□□ -0.84
LINC00665-207ENST00000590657 DCAF8L2P0C7V8 631 aa9.75□□□□□ -0.85
LINC00665-207ENST00000590657 ZCCHC6Q5VYS8 1495 aaKnown RBP9.72□□□□□ -0.85
LINC00665-207ENST00000590657 SCRIBQ14160 1630 aa9.7□□□□□ -0.86
LINC00665-207ENST00000590657 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
LINC00665-207ENST00000590657 NCBP3Q53F19 620 aaKnown RBP9.64□□□□□ -0.87
LINC00665-207ENST00000590657 NCAPD3P42695 1498 aa9.6□□□□□ -0.87
LINC00665-207ENST00000590657 THOC2Q8NI27 1593 aaKnown RBP9.6□□□□□ -0.87
LINC00665-207ENST00000590657 HRCP23327 699 aa9.59□□□□□ -0.87
LINC00665-207ENST00000590657 HMGXB3Q12766 1538 aa9.54□□□□□ -0.88
LINC00665-207ENST00000590657 SLC4A1APQ9BWU0 796 aaKnown RBP9.52□□□□□ -0.88
LINC00665-207ENST00000590657 DAXXQ9UER7 740 aaPredicted RBP9.5□□□□□ -0.89
LINC00665-207ENST00000590657 TRIM41Q8WV44 630 aa9.5□□□□□ -0.89
LINC00665-207ENST00000590657 LAMC3Q9Y6N6 1575 aa9.49□□□□□ -0.89
LINC00665-207ENST00000590657 PRKCSHP14314 528 aaPredicted RBP9.47□□□□□ -0.89
LINC00665-207ENST00000590657 SMARCA2P51531 1590 aa9.46□□□□□ -0.89
LINC00665-207ENST00000590657 ADRA2BP18089 450 aa9.43□□□□□ -0.9
LINC00665-207ENST00000590657 ATAD2BQ9ULI0 1458 aa9.43□□□□□ -0.9
LINC00665-207ENST00000590657 BAZ1AQ9NRL2 1556 aaPredicted RBP9.4□□□□□ -0.9
LINC00665-207ENST00000590657 NESP48681 1621 aa9.39□□□□□ -0.91
LINC00665-207ENST00000590657 KIF21AQ7Z4S6 1674 aa9.38□□□□□ -0.91
LINC00665-207ENST00000590657 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
LINC00665-207ENST00000590657 WDR62O43379 1518 aa9.38□□□□□ -0.91
LINC00665-207ENST00000590657 PEG3Q9GZU2 1588 aa9.37□□□□□ -0.91
LINC00665-207ENST00000590657 TTBK1Q5TCY1 1321 aaPredicted RBP9.37□□□□□ -0.91
LINC00665-207ENST00000590657 SMARCA4P51532 1647 aa9.33□□□□□ -0.92
LINC00665-207ENST00000590657 MRC2Q9UBG0 1479 aa9.33□□□□□ -0.92
LINC00665-207ENST00000590657 RIMBP3CA6NJZ7 1639 aa9.3□□□□□ -0.92
LINC00665-207ENST00000590657 RIMBP3BA6NNM3 1639 aa9.3□□□□□ -0.92
LINC00665-207ENST00000590657 RIMBP3Q9UFD9 1639 aa9.3□□□□□ -0.92
LINC00665-207ENST00000590657 OSCARQ8IYS5 282 aa9.29□□□□□ -0.92
LINC00665-207ENST00000590657 BAZ1BQ9UIG0 1483 aaKnown RBP9.28□□□□□ -0.92
LINC00665-207ENST00000590657 ZEB1P37275 1124 aaPredicted RBP9.23□□□□□ -0.93
LINC00665-207ENST00000590657 ZBTB22O15209 634 aa9.22□□□□□ -0.93
LINC00665-207ENST00000590657 CADPSQ9ULU8 1353 aa9.21□□□□□ -0.94
LINC00665-207ENST00000590657 ARHGEF11O15085 1522 aa9.19□□□□□ -0.94
LINC00665-207ENST00000590657 TAOK2Q9UL54 1235 aa9.18□□□□□ -0.94
LINC00665-207ENST00000590657 TIMELESSQ9UNS1 1208 aa9.18□□□□□ -0.94
LINC00665-207ENST00000590657 CEP164Q9UPV0 1460 aa9.15□□□□□ -0.94
LINC00665-207ENST00000590657 ARXQ96QS3 562 aa9.1□□□□□ -0.95
LINC00665-207ENST00000590657 RSF1Q96T23 1441 aaPredicted RBP9.1□□□□□ -0.95
LINC00665-207ENST00000590657 FANCD2Q9BXW9 1451 aa9.08□□□□□ -0.96
LINC00665-207ENST00000590657 BCANQ96GW7 911 aa9.08□□□□□ -0.96
LINC00665-207ENST00000590657 ARAP1Q96P48 1450 aa9.06□□□□□ -0.96
LINC00665-207ENST00000590657 IFT140Q96RY7 1462 aa9.05□□□□□ -0.96
LINC00665-207ENST00000590657 TULP1O00294 542 aaPredicted RBP9.05□□□□□ -0.96
LINC00665-207ENST00000590657 PRDM2Q13029 1718 aa9.05□□□□□ -0.96
LINC00665-207ENST00000590657 CFTRP13569 1480 aa9.04□□□□□ -0.96
LINC00665-207ENST00000590657 URB2Q14146 1524 aaKnown RBP9.04□□□□□ -0.96
LINC00665-207ENST00000590657 PLCB2Q00722 1185 aa9.04□□□□□ -0.96
LINC00665-207ENST00000590657 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
LINC00665-207ENST00000590657 PCGF6Q9BYE7 350 aa9.04□□□□□ -0.96
LINC00665-207ENST00000590657 SENP3Q9H4L4 574 aaPredicted RBP9.03□□□□□ -0.96
LINC00665-207ENST00000590657 PPP6R1Q9UPN7 881 aa9.02□□□□□ -0.97
LINC00665-207ENST00000590657 SCAF1Q9H7N4 1312 aaKnown RBP9.02□□□□□ -0.97
LINC00665-207ENST00000590657 MROH2BQ7Z745 1585 aa9.01□□□□□ -0.97
LINC00665-207ENST00000590657 TRIM26Q12899 539 aaPredicted RBP9□□□□□ -0.97
LINC00665-207ENST00000590657 TRHP20396 242 aaPredicted RBP8.99□□□□□ -0.97
LINC00665-207ENST00000590657 CHD1O14646 1710 aa8.98□□□□□ -0.97
LINC00665-207ENST00000590657 WDR97A6NE52 1622 aa8.97□□□□□ -0.97
LINC00665-207ENST00000590657 ABCC8Q09428 1581 aa8.96□□□□□ -0.97
LINC00665-207ENST00000590657 CYB5RLQ6IPT4 315 aa8.96□□□□□ -0.97
LINC00665-207ENST00000590657 EIF4G3O43432 1585 aaKnown RBP8.96□□□□□ -0.98
LINC00665-207ENST00000590657 PPARGC1BQ86YN6 1023 aaKnown RBP8.96□□□□□ -0.98
LINC00665-207ENST00000590657 CLASP1Q7Z460 1538 aa8.95□□□□□ -0.98
LINC00665-207ENST00000590657 HAP1P54257 671 aaPredicted RBP8.94□□□□□ -0.98
LINC00665-207ENST00000590657 ZNF608Q9ULD9 1512 aaPredicted RBP8.92□□□□□ -0.98
LINC00665-207ENST00000590657 NPM3O75607 178 aaKnown RBP8.92□□□□□ -0.98
LINC00665-207ENST00000590657 ACIN1Q9UKV3 1341 aaKnown RBP8.9□□□□□ -0.98
LINC00665-207ENST00000590657 FKBP8Q14318 412 aa8.89□□□□□ -0.99
LINC00665-207ENST00000590657 TARBP1Q13395 1621 aaKnown RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms