RNA–Protein interactions for RNA: ENST00000588820.1

HKR1-210, Transcript of HKR1, GLI-Kruppel zinc finger family member, humanhuman

Gene HKR1, Length 1,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HKR1-210ENST00000588820 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.81
HKR1-210ENST00000588820 CCDC180Q9P1Z9 1646 aa17.13■□□□□ 0.33
HKR1-210ENST00000588820 ZCCHC6Q5VYS8 1495 aaKnown RBP17.09■□□□□ 0.33
HKR1-210ENST00000588820 SHROOM4Q9ULL8 1493 aa16.92■□□□□ 0.3
HKR1-210ENST00000588820 HRCP23327 699 aa16.84■□□□□ 0.29
HKR1-210ENST00000588820 SUPT5HO00267 1087 aaKnown RBP16.82■□□□□ 0.28
HKR1-210ENST00000588820 DCAF1Q9Y4B6 1507 aa16.72■□□□□ 0.27
HKR1-210ENST00000588820 CHIC1Q5VXU3 224 aa16.69■□□□□ 0.26
HKR1-210ENST00000588820 MYO15BQ96JP2 1530 aa16.59■□□□□ 0.25
HKR1-210ENST00000588820 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
HKR1-210ENST00000588820 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.2
HKR1-210ENST00000588820 TRIM26Q12899 539 aaPredicted RBP16.27■□□□□ 0.19
HKR1-210ENST00000588820 PELP1Q8IZL8 1130 aaKnown RBP16.21■□□□□ 0.19
HKR1-210ENST00000588820 ABCC9O60706 1549 aa16.21■□□□□ 0.19
HKR1-210ENST00000588820 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
HKR1-210ENST00000588820 PPARGC1BQ86YN6 1023 aaKnown RBP16.06■□□□□ 0.16
HKR1-210ENST00000588820 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
HKR1-210ENST00000588820 RB1CC1Q8TDY2 1594 aa15.97■□□□□ 0.15
HKR1-210ENST00000588820 RSF1Q96T23 1441 aaPredicted RBP15.93■□□□□ 0.14
HKR1-210ENST00000588820 TRIM41Q8WV44 630 aa15.84■□□□□ 0.13
HKR1-210ENST00000588820 SCRIBQ14160 1630 aa15.75■□□□□ 0.11
HKR1-210ENST00000588820 NACADO15069 1562 aa15.7■□□□□ 0.1
HKR1-210ENST00000588820 MYT1Q01538 1121 aa15.66■□□□□ 0.1
HKR1-210ENST00000588820 SCAF1Q9H7N4 1312 aaKnown RBP15.56■□□□□ 0.08
HKR1-210ENST00000588820 BAZ1AQ9NRL2 1556 aaPredicted RBP15.56■□□□□ 0.08
HKR1-210ENST00000588820 WRNQ14191 1432 aaPredicted RBP eCLIP15.53■□□□□ 0.08
HKR1-210ENST00000588820 EIF4G1Q04637 1599 aaKnown RBP15.51■□□□□ 0.07
HKR1-210ENST00000588820 CENPBP07199 599 aaPredicted RBP15.49■□□□□ 0.07
HKR1-210ENST00000588820 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
HKR1-210ENST00000588820 ACIN1Q9UKV3 1341 aaKnown RBP15.47■□□□□ 0.07
HKR1-210ENST00000588820 EEA1Q15075 1411 aa15.45■□□□□ 0.06
HKR1-210ENST00000588820 FAM9AQ8IZU1 332 aaPredicted RBP15.44■□□□□ 0.06
HKR1-210ENST00000588820 WIZO95785 1651 aa15.43■□□□□ 0.06
HKR1-210ENST00000588820 CECR2Q9BXF3 1484 aa15.42■□□□□ 0.06
HKR1-210ENST00000588820 CCER1Q8TC90 406 aaPredicted RBP15.41■□□□□ 0.06
HKR1-210ENST00000588820 TOP2AP11388 1531 aaKnown RBP15.37■□□□□ 0.05
HKR1-210ENST00000588820 TNIKQ9UKE5 1360 aa15.34■□□□□ 0.05
HKR1-210ENST00000588820 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.05
HKR1-210ENST00000588820 CEP162Q5TB80 1403 aa15.27■□□□□ 0.04
HKR1-210ENST00000588820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.27■□□□□ 0.03
HKR1-210ENST00000588820 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
HKR1-210ENST00000588820 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
HKR1-210ENST00000588820 SMARCA2P51531 1590 aa15.21■□□□□ 0.03
HKR1-210ENST00000588820 ZNF316A6NFI3 1004 aaPredicted RBP15.19■□□□□ 0.02
HKR1-210ENST00000588820 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
HKR1-210ENST00000588820 GOLGA3Q08378 1498 aa15.19■□□□□ 0.02
HKR1-210ENST00000588820 CCDC88BA6NC98 1476 aa15.17■□□□□ 0.02
HKR1-210ENST00000588820 CLSPNQ9HAW4 1339 aa15.15■□□□□ 0.02
HKR1-210ENST00000588820 CSRNP3Q8WYN3 585 aa15.13■□□□□ 0.01
HKR1-210ENST00000588820 KIF21BO75037 1637 aa15.12■□□□□ 0.01
HKR1-210ENST00000588820 ABCC8Q09428 1581 aa15.12■□□□□ 0.01
HKR1-210ENST00000588820 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
HKR1-210ENST00000588820 EHMT2Q96KQ7 1210 aa15.09■□□□□ 0.01
HKR1-210ENST00000588820 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
HKR1-210ENST00000588820 PEG3Q9GZU2 1588 aa15.06■□□□□ 0
HKR1-210ENST00000588820 SOGA1O94964 1423 aa15.05■□□□□ 0
HKR1-210ENST00000588820 UBTFP17480 764 aaKnown RBP14.99□□□□□ -0.01
HKR1-210ENST00000588820 VPS8Q8N3P4 1428 aa14.99□□□□□ -0.01
HKR1-210ENST00000588820 UNC13AQ9UPW8 1703 aa14.98□□□□□ -0.01
HKR1-210ENST00000588820 CLIP1P30622 1438 aa14.94□□□□□ -0.02
HKR1-210ENST00000588820 APLP2Q06481 763 aa14.9□□□□□ -0.02
HKR1-210ENST00000588820 RUSC2Q8N2Y8 1516 aa14.89□□□□□ -0.03
HKR1-210ENST00000588820 ERICH3Q5RHP9 1530 aa14.85□□□□□ -0.03
HKR1-210ENST00000588820 SYNJ1O43426 1573 aa14.85□□□□□ -0.03
HKR1-210ENST00000588820 MIER1Q8N108 512 aa14.84□□□□□ -0.03
HKR1-210ENST00000588820 TOP2BQ02880 1626 aa14.79□□□□□ -0.04
HKR1-210ENST00000588820 CUX2O14529 1486 aa14.77□□□□□ -0.04
HKR1-210ENST00000588820 BIVM-ERCC5R4GMW8 1640 aa14.77□□□□□ -0.04
HKR1-210ENST00000588820 TTBK1Q5TCY1 1321 aaPredicted RBP14.77□□□□□ -0.05
HKR1-210ENST00000588820 HNRNPUL2Q1KMD3 747 aaKnown RBP14.75□□□□□ -0.05
HKR1-210ENST00000588820 YTHDC1Q96MU7 727 aaKnown RBP14.75□□□□□ -0.05
HKR1-210ENST00000588820 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
HKR1-210ENST00000588820 RAPGEF2Q9Y4G8 1499 aa14.73□□□□□ -0.05
HKR1-210ENST00000588820 RRBP1Q9P2E9 1410 aaKnown RBP14.72□□□□□ -0.05
HKR1-210ENST00000588820 DHX57Q6P158 1386 aaKnown RBP14.71□□□□□ -0.05
HKR1-210ENST00000588820 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
HKR1-210ENST00000588820 PRXQ9BXM0 1461 aa14.69□□□□□ -0.06
HKR1-210ENST00000588820 MAP3K1Q13233 1512 aa14.64□□□□□ -0.07
HKR1-210ENST00000588820 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
HKR1-210ENST00000588820 SUPT16HQ9Y5B9 1047 aaKnown RBP14.6□□□□□ -0.07
HKR1-210ENST00000588820 TIMELESSQ9UNS1 1208 aa14.57□□□□□ -0.08
HKR1-210ENST00000588820 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
HKR1-210ENST00000588820 CCNB3Q8WWL7 1395 aa14.56□□□□□ -0.08
HKR1-210ENST00000588820 HMGXB3Q12766 1538 aa14.56□□□□□ -0.08
HKR1-210ENST00000588820 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
HKR1-210ENST00000588820 ANP32EQ9BTT0 268 aa14.46□□□□□ -0.09
HKR1-210ENST00000588820 NCAPD3P42695 1498 aa14.45□□□□□ -0.1
HKR1-210ENST00000588820 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
HKR1-210ENST00000588820 TIAM1Q13009 1591 aa14.45□□□□□ -0.1
HKR1-210ENST00000588820 TSHZ2Q9NRE2 1034 aa14.43□□□□□ -0.1
HKR1-210ENST00000588820 CUX1P39880 1505 aa14.43□□□□□ -0.1
HKR1-210ENST00000588820 SETD5Q9C0A6 1442 aa14.43□□□□□ -0.1
HKR1-210ENST00000588820 KANK4Q5T7N3 995 aaPredicted RBP14.43□□□□□ -0.1
HKR1-210ENST00000588820 MAPKBP1O60336 1514 aa14.43□□□□□ -0.1
HKR1-210ENST00000588820 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.42□□□□□ -0.1
HKR1-210ENST00000588820 FHAD1B1AJZ9 1412 aa14.42□□□□□ -0.1
HKR1-210ENST00000588820 CCER2I3L3R5 266 aa14.41□□□□□ -0.1
HKR1-210ENST00000588820 CFTRP13569 1480 aa14.4□□□□□ -0.1
HKR1-210ENST00000588820 RAB3GAP2Q9H2M9 1393 aa14.4□□□□□ -0.1
HKR1-210ENST00000588820 PABPN1Q86U42 306 aaKnown RBP eCLIP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms