RNA–Protein interactions for RNA: ENST00000588591.5

CELF4-211, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 3

Gene CELF4, Length 2,651 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-211ENST00000588591 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
CELF4-211ENST00000588591 SHROOM4Q9ULL8 1493 aa32.23■■■□□ 2.75
CELF4-211ENST00000588591 CCDC180Q9P1Z9 1646 aa32.23■■■□□ 2.75
CELF4-211ENST00000588591 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
CELF4-211ENST00000588591 SUPT5HO00267 1087 aaKnown RBP31.67■■■□□ 2.66
CELF4-211ENST00000588591 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
CELF4-211ENST00000588591 CHIC1Q5VXU3 224 aa30.87■■■□□ 2.53
CELF4-211ENST00000588591 MYO15BQ96JP2 1530 aa30.82■■■□□ 2.52
CELF4-211ENST00000588591 DCAF1Q9Y4B6 1507 aa30.81■■■□□ 2.52
CELF4-211ENST00000588591 HRCP23327 699 aa30.18■■■□□ 2.42
CELF4-211ENST00000588591 ABCC9O60706 1549 aa30.12■■■□□ 2.41
CELF4-211ENST00000588591 PCGF6Q9BYE7 350 aa30.08■■■□□ 2.41
CELF4-211ENST00000588591 LOC105371045A0A1W2PR82 267 aa29.99■■■□□ 2.39
CELF4-211ENST00000588591 NACADO15069 1562 aa29.97■■■□□ 2.39
CELF4-211ENST00000588591 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
CELF4-211ENST00000588591 RSF1Q96T23 1441 aaPredicted RBP29.84■■■□□ 2.37
CELF4-211ENST00000588591 RB1CC1Q8TDY2 1594 aa29.68■■■□□ 2.34
CELF4-211ENST00000588591 PPARGC1BQ86YN6 1023 aaKnown RBP29.58■■■□□ 2.33
CELF4-211ENST00000588591 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
CELF4-211ENST00000588591 TRIM26Q12899 539 aaPredicted RBP29.44■■■□□ 2.3
CELF4-211ENST00000588591 CECR2Q9BXF3 1484 aa29.36■■■□□ 2.29
CELF4-211ENST00000588591 FAM9AQ8IZU1 332 aaPredicted RBP29.27■■■□□ 2.28
CELF4-211ENST00000588591 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
CELF4-211ENST00000588591 WIZO95785 1651 aa29.11■■■□□ 2.25
CELF4-211ENST00000588591 EHMT2Q96KQ7 1210 aa29.04■■■□□ 2.24
CELF4-211ENST00000588591 UNC13AQ9UPW8 1703 aa29.02■■■□□ 2.24
CELF4-211ENST00000588591 BAZ1AQ9NRL2 1556 aaPredicted RBP28.91■■■□□ 2.22
CELF4-211ENST00000588591 ZEB1P37275 1124 aaPredicted RBP28.82■■■□□ 2.2
CELF4-211ENST00000588591 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
CELF4-211ENST00000588591 BICRAQ9NZM4 1560 aa28.71■■■□□ 2.19
CELF4-211ENST00000588591 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
CELF4-211ENST00000588591 SMARCA4P51532 1647 aa28.59■■■□□ 2.17
CELF4-211ENST00000588591 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
CELF4-211ENST00000588591 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
CELF4-211ENST00000588591 SMARCA2P51531 1590 aa28.49■■■□□ 2.15
CELF4-211ENST00000588591 SOGA1O94964 1423 aa28.31■■■□□ 2.12
CELF4-211ENST00000588591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.28■■■□□ 2.12
CELF4-211ENST00000588591 PABPN1Q86U42 306 aaKnown RBP eCLIP28.26■■■□□ 2.11
CELF4-211ENST00000588591 CEP162Q5TB80 1403 aa28.23■■■□□ 2.11
CELF4-211ENST00000588591 WRNQ14191 1432 aaPredicted RBP eCLIP28.23■■■□□ 2.11
CELF4-211ENST00000588591 CCER1Q8TC90 406 aaPredicted RBP28.18■■■□□ 2.1
CELF4-211ENST00000588591 RUSC2Q8N2Y8 1516 aa28.17■■■□□ 2.1
CELF4-211ENST00000588591 TNIKQ9UKE5 1360 aa28.16■■■□□ 2.1
CELF4-211ENST00000588591 TTBK1Q5TCY1 1321 aaPredicted RBP28.14■■■□□ 2.1
CELF4-211ENST00000588591 CSRNP3Q8WYN3 585 aa28.14■■■□□ 2.09
CELF4-211ENST00000588591 EEA1Q15075 1411 aa28.12■■■□□ 2.09
CELF4-211ENST00000588591 UBTFP17480 764 aaKnown RBP28.05■■■□□ 2.08
CELF4-211ENST00000588591 PEG3Q9GZU2 1588 aa28.04■■■□□ 2.08
CELF4-211ENST00000588591 GOLGA3Q08378 1498 aa27.97■■■□□ 2.07
CELF4-211ENST00000588591 SCAF1Q9H7N4 1312 aaKnown RBP27.91■■■□□ 2.06
CELF4-211ENST00000588591 SYNJ1O43426 1573 aa27.89■■■□□ 2.05
CELF4-211ENST00000588591 ATAD2BQ9ULI0 1458 aa27.84■■■□□ 2.05
CELF4-211ENST00000588591 CEP164Q9UPV0 1460 aa27.79■■■□□ 2.04
CELF4-211ENST00000588591 BAZ1BQ9UIG0 1483 aaKnown RBP27.76■■■□□ 2.03
CELF4-211ENST00000588591 KIF21BO75037 1637 aa27.74■■■□□ 2.03
CELF4-211ENST00000588591 DIEXFQ68CQ4 756 aaKnown RBP27.71■■■□□ 2.03
CELF4-211ENST00000588591 CLIP1P30622 1438 aa27.67■■■□□ 2.02
CELF4-211ENST00000588591 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
CELF4-211ENST00000588591 NCAPD3P42695 1498 aa27.61■■■□□ 2.01
CELF4-211ENST00000588591 RAPGEF2Q9Y4G8 1499 aa27.6■■■□□ 2.01
CELF4-211ENST00000588591 ACIN1Q9UKV3 1341 aaKnown RBP27.58■■■□□ 2.01
CELF4-211ENST00000588591 VPS8Q8N3P4 1428 aa27.57■■■□□ 2
CELF4-211ENST00000588591 NEUROD1Q13562 356 aa27.56■■■□□ 2
CELF4-211ENST00000588591 HNRNPUL2Q1KMD3 747 aaKnown RBP27.54■■■□□ 2
CELF4-211ENST00000588591 TOP2BQ02880 1626 aa27.5■■□□□ 1.99
CELF4-211ENST00000588591 RANGAP1P46060 587 aaPredicted RBP27.48■■□□□ 1.99
CELF4-211ENST00000588591 ZNF316A6NFI3 1004 aaPredicted RBP27.46■■□□□ 1.99
CELF4-211ENST00000588591 APLP2Q06481 763 aa27.42■■□□□ 1.98
CELF4-211ENST00000588591 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
CELF4-211ENST00000588591 PELP1Q8IZL8 1130 aaKnown RBP27.39■■□□□ 1.97
CELF4-211ENST00000588591 BIVM-ERCC5R4GMW8 1640 aa27.38■■□□□ 1.97
CELF4-211ENST00000588591 CENPBP07199 599 aaPredicted RBP27.36■■□□□ 1.97
CELF4-211ENST00000588591 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
CELF4-211ENST00000588591 GTF3C3Q9Y5Q9 886 aa27.28■■□□□ 1.96
CELF4-211ENST00000588591 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
CELF4-211ENST00000588591 CUX1P39880 1505 aa27.23■■□□□ 1.95
CELF4-211ENST00000588591 ARAP1Q96P48 1450 aa27.21■■□□□ 1.95
CELF4-211ENST00000588591 KANK4Q5T7N3 995 aaPredicted RBP27.13■■□□□ 1.93
CELF4-211ENST00000588591 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
CELF4-211ENST00000588591 MIER1Q8N108 512 aa27.12■■□□□ 1.93
CELF4-211ENST00000588591 CFTRP13569 1480 aa27.09■■□□□ 1.93
CELF4-211ENST00000588591 YTHDC1Q96MU7 727 aaKnown RBP27.09■■□□□ 1.93
CELF4-211ENST00000588591 DHX57Q6P158 1386 aaKnown RBP27.02■■□□□ 1.92
CELF4-211ENST00000588591 CLSPNQ9HAW4 1339 aa26.97■■□□□ 1.91
CELF4-211ENST00000588591 ARHGAP35Q9NRY4 1499 aa26.96■■□□□ 1.91
CELF4-211ENST00000588591 RRBP1Q9P2E9 1410 aaKnown RBP26.95■■□□□ 1.9
CELF4-211ENST00000588591 PRDM2Q13029 1718 aa26.94■■□□□ 1.9
CELF4-211ENST00000588591 CUX2O14529 1486 aa26.85■■□□□ 1.89
CELF4-211ENST00000588591 IGF1RP08069 1367 aa26.84■■□□□ 1.89
CELF4-211ENST00000588591 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
CELF4-211ENST00000588591 CADPSQ9ULU8 1353 aa26.81■■□□□ 1.88
CELF4-211ENST00000588591 ITGAEP38570 1179 aa26.75■■□□□ 1.87
CELF4-211ENST00000588591 CARMIL1Q5VZK9 1371 aa26.72■■□□□ 1.87
CELF4-211ENST00000588591 FGD5Q6ZNL6 1462 aa26.71■■□□□ 1.87
CELF4-211ENST00000588591 LAMC3Q9Y6N6 1575 aa26.71■■□□□ 1.87
CELF4-211ENST00000588591 TIAM1Q13009 1591 aa26.67■■□□□ 1.86
CELF4-211ENST00000588591 MAP3K1Q13233 1512 aa26.63■■□□□ 1.85
CELF4-211ENST00000588591 RAB3GAP2Q9H2M9 1393 aa26.62■■□□□ 1.85
CELF4-211ENST00000588591 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
CELF4-211ENST00000588591 PHLDB1Q86UU1 1377 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms