RNA–Protein interactions for RNA: ENST00000585850.1

ABCA8-206, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best)

Gene ABCA8, Length 1,502 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-206ENST00000585850 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
ABCA8-206ENST00000585850 CHIC1Q5VXU3 224 aa21.03■□□□□ 0.96
ABCA8-206ENST00000585850 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
ABCA8-206ENST00000585850 SENP3Q9H4L4 574 aaPredicted RBP19■□□□□ 0.63
ABCA8-206ENST00000585850 PHF23Q9BUL5 403 aaPredicted RBP18.71■□□□□ 0.59
ABCA8-206ENST00000585850 FOXD1Q16676 465 aa17.74■□□□□ 0.43
ABCA8-206ENST00000585850 CCDC180Q9P1Z9 1646 aa16.97■□□□□ 0.31
ABCA8-206ENST00000585850 PLPPR3Q6T4P5 718 aa16.68■□□□□ 0.26
ABCA8-206ENST00000585850 MSH5O43196 834 aa16.64■□□□□ 0.25
ABCA8-206ENST00000585850 ZCCHC6Q5VYS8 1495 aaKnown RBP16.64■□□□□ 0.25
ABCA8-206ENST00000585850 POTEDQ86YR6 584 aa16.51■□□□□ 0.23
ABCA8-206ENST00000585850 PIAS4Q8N2W9 510 aaPredicted RBP16.48■□□□□ 0.23
ABCA8-206ENST00000585850 PPP6R1Q9UPN7 881 aa16.47■□□□□ 0.23
ABCA8-206ENST00000585850 SHROOM4Q9ULL8 1493 aa16.4■□□□□ 0.22
ABCA8-206ENST00000585850 ADRA2BP18089 450 aa16.37■□□□□ 0.21
ABCA8-206ENST00000585850 DCAF1Q9Y4B6 1507 aa16.27■□□□□ 0.19
ABCA8-206ENST00000585850 SUPT5HO00267 1087 aaKnown RBP16.04■□□□□ 0.16
ABCA8-206ENST00000585850 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.15
ABCA8-206ENST00000585850 MYO15BQ96JP2 1530 aa15.86■□□□□ 0.13
ABCA8-206ENST00000585850 ABCC9O60706 1549 aa15.7■□□□□ 0.1
ABCA8-206ENST00000585850 SCRIBQ14160 1630 aa15.65■□□□□ 0.1
ABCA8-206ENST00000585850 NACADO15069 1562 aa15.63■□□□□ 0.09
ABCA8-206ENST00000585850 RSF1Q96T23 1441 aaPredicted RBP15.44■□□□□ 0.06
ABCA8-206ENST00000585850 RB1CC1Q8TDY2 1594 aa15.38■□□□□ 0.05
ABCA8-206ENST00000585850 CECR2Q9BXF3 1484 aa15.23■□□□□ 0.03
ABCA8-206ENST00000585850 MROH2BQ7Z745 1585 aa15.22■□□□□ 0.03
ABCA8-206ENST00000585850 UNC13AQ9UPW8 1703 aa15.2■□□□□ 0.02
ABCA8-206ENST00000585850 WIZO95785 1651 aa15.18■□□□□ 0.02
ABCA8-206ENST00000585850 BAZ1AQ9NRL2 1556 aaPredicted RBP15.15■□□□□ 0.02
ABCA8-206ENST00000585850 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0.01
ABCA8-206ENST00000585850 DMRT2Q9Y5R5 561 aa15.08■□□□□ 0.01
ABCA8-206ENST00000585850 LOC105371045A0A1W2PR82 267 aa15.07■□□□□ 0
ABCA8-206ENST00000585850 SMARCA4P51532 1647 aa15.04■□□□□ -0
ABCA8-206ENST00000585850 TRIM41Q8WV44 630 aa15.03■□□□□ -0
ABCA8-206ENST00000585850 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
ABCA8-206ENST00000585850 TOP2AP11388 1531 aaKnown RBP15□□□□□ -0.01
ABCA8-206ENST00000585850 HRCP23327 699 aa14.98□□□□□ -0.01
ABCA8-206ENST00000585850 PCGF6Q9BYE7 350 aa14.95□□□□□ -0.02
ABCA8-206ENST00000585850 SCAF1Q9H7N4 1312 aaKnown RBP14.95□□□□□ -0.02
ABCA8-206ENST00000585850 BICRAQ9NZM4 1560 aa14.91□□□□□ -0.02
ABCA8-206ENST00000585850 SMARCA2P51531 1590 aa14.89□□□□□ -0.03
ABCA8-206ENST00000585850 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
ABCA8-206ENST00000585850 CCDC88BA6NC98 1476 aa14.83□□□□□ -0.04
ABCA8-206ENST00000585850 PEG3Q9GZU2 1588 aa14.82□□□□□ -0.04
ABCA8-206ENST00000585850 FAM9AQ8IZU1 332 aaPredicted RBP14.78□□□□□ -0.04
ABCA8-206ENST00000585850 ABCC8Q09428 1581 aa14.72□□□□□ -0.05
ABCA8-206ENST00000585850 PABPN1Q86U42 306 aaKnown RBP eCLIP14.68□□□□□ -0.06
ABCA8-206ENST00000585850 EEA1Q15075 1411 aa14.62□□□□□ -0.07
ABCA8-206ENST00000585850 ATAD2BQ9ULI0 1458 aa14.61□□□□□ -0.07
ABCA8-206ENST00000585850 PPP4R3CPQ6ZMV5 832 aa14.61□□□□□ -0.07
ABCA8-206ENST00000585850 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
ABCA8-206ENST00000585850 EHMT2Q96KQ7 1210 aa14.55□□□□□ -0.08
ABCA8-206ENST00000585850 ZEB1P37275 1124 aaPredicted RBP14.54□□□□□ -0.08
ABCA8-206ENST00000585850 PPARGC1BQ86YN6 1023 aaKnown RBP14.53□□□□□ -0.08
ABCA8-206ENST00000585850 WRNQ14191 1432 aaPredicted RBP eCLIP14.52□□□□□ -0.09
ABCA8-206ENST00000585850 SOGA1O94964 1423 aa14.51□□□□□ -0.09
ABCA8-206ENST00000585850 SYNJ1O43426 1573 aa14.49□□□□□ -0.09
ABCA8-206ENST00000585850 TNIKQ9UKE5 1360 aa14.49□□□□□ -0.09
ABCA8-206ENST00000585850 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
ABCA8-206ENST00000585850 CSRNP3Q8WYN3 585 aa14.46□□□□□ -0.1
ABCA8-206ENST00000585850 CEP162Q5TB80 1403 aa14.45□□□□□ -0.1
ABCA8-206ENST00000585850 HMGXB3Q12766 1538 aa14.45□□□□□ -0.1
ABCA8-206ENST00000585850 RUSC2Q8N2Y8 1516 aa14.45□□□□□ -0.1
ABCA8-206ENST00000585850 GOLGA3Q08378 1498 aa14.45□□□□□ -0.1
ABCA8-206ENST00000585850 KIF21BO75037 1637 aa14.44□□□□□ -0.1
ABCA8-206ENST00000585850 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
ABCA8-206ENST00000585850 TOP2BQ02880 1626 aa14.39□□□□□ -0.11
ABCA8-206ENST00000585850 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
ABCA8-206ENST00000585850 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
ABCA8-206ENST00000585850 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
ABCA8-206ENST00000585850 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
ABCA8-206ENST00000585850 UBTFP17480 764 aaKnown RBP14.31□□□□□ -0.12
ABCA8-206ENST00000585850 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
ABCA8-206ENST00000585850 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
ABCA8-206ENST00000585850 DCAF8L1A6NGE4 600 aa14.29□□□□□ -0.12
ABCA8-206ENST00000585850 ERICH3Q5RHP9 1530 aa14.22□□□□□ -0.13
ABCA8-206ENST00000585850 CFTRP13569 1480 aa14.22□□□□□ -0.13
ABCA8-206ENST00000585850 CLIP1P30622 1438 aa14.21□□□□□ -0.13
ABCA8-206ENST00000585850 RNF39Q9H2S5 420 aa14.21□□□□□ -0.13
ABCA8-206ENST00000585850 CUX1P39880 1505 aa14.2□□□□□ -0.14
ABCA8-206ENST00000585850 RAPGEF2Q9Y4G8 1499 aa14.2□□□□□ -0.14
ABCA8-206ENST00000585850 VPS8Q8N3P4 1428 aa14.18□□□□□ -0.14
ABCA8-206ENST00000585850 PRXQ9BXM0 1461 aa14.15□□□□□ -0.14
ABCA8-206ENST00000585850 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
ABCA8-206ENST00000585850 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
ABCA8-206ENST00000585850 KIF27Q86VH2 1401 aa14.11□□□□□ -0.15
ABCA8-206ENST00000585850 TTBK1Q5TCY1 1321 aaPredicted RBP14.08□□□□□ -0.16
ABCA8-206ENST00000585850 CC2D2AQ9P2K1 1620 aa14.07□□□□□ -0.16
ABCA8-206ENST00000585850 DNAJC5BQ9UF47 199 aa14.07□□□□□ -0.16
ABCA8-206ENST00000585850 CADPSQ9ULU8 1353 aa14.04□□□□□ -0.16
ABCA8-206ENST00000585850 APLP2Q06481 763 aa14.04□□□□□ -0.16
ABCA8-206ENST00000585850 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
ABCA8-206ENST00000585850 C1QBPQ07021 282 aaKnown RBP13.98□□□□□ -0.17
ABCA8-206ENST00000585850 NCBP3Q53F19 620 aaKnown RBP13.96□□□□□ -0.17
ABCA8-206ENST00000585850 CUX2O14529 1486 aa13.96□□□□□ -0.18
ABCA8-206ENST00000585850 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.18
ABCA8-206ENST00000585850 DNMBPQ6XZF7 1577 aa13.93□□□□□ -0.18
ABCA8-206ENST00000585850 ARHGAP35Q9NRY4 1499 aa13.92□□□□□ -0.18
ABCA8-206ENST00000585850 RANGAP1P46060 587 aaPredicted RBP13.91□□□□□ -0.18
ABCA8-206ENST00000585850 FANCD2Q9BXW9 1451 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms