RNA–Protein interactions for RNA: ENST00000585506.1

PLEKHM1-213, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 5

Gene PLEKHM1, Length 332 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-213ENST00000585506 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
PLEKHM1-213ENST00000585506 CCDC180Q9P1Z9 1646 aa14.32□□□□□ -0.12
PLEKHM1-213ENST00000585506 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
PLEKHM1-213ENST00000585506 DCAF1Q9Y4B6 1507 aa13.95□□□□□ -0.18
PLEKHM1-213ENST00000585506 HRCP23327 699 aa13.93□□□□□ -0.18
PLEKHM1-213ENST00000585506 SHROOM4Q9ULL8 1493 aa13.92□□□□□ -0.18
PLEKHM1-213ENST00000585506 SUPT5HO00267 1087 aaKnown RBP13.85□□□□□ -0.19
PLEKHM1-213ENST00000585506 CHIC1Q5VXU3 224 aa13.77□□□□□ -0.21
PLEKHM1-213ENST00000585506 MYO15BQ96JP2 1530 aa13.69□□□□□ -0.22
PLEKHM1-213ENST00000585506 PCGF6Q9BYE7 350 aa13.53□□□□□ -0.24
PLEKHM1-213ENST00000585506 ZEB1P37275 1124 aaPredicted RBP13.44□□□□□ -0.26
PLEKHM1-213ENST00000585506 PELP1Q8IZL8 1130 aaKnown RBP13.44□□□□□ -0.26
PLEKHM1-213ENST00000585506 TRIM26Q12899 539 aaPredicted RBP13.41□□□□□ -0.26
PLEKHM1-213ENST00000585506 ABCC9O60706 1549 aa13.36□□□□□ -0.27
PLEKHM1-213ENST00000585506 PPARGC1BQ86YN6 1023 aaKnown RBP13.29□□□□□ -0.28
PLEKHM1-213ENST00000585506 DCAF8L2P0C7V8 631 aa13.23□□□□□ -0.29
PLEKHM1-213ENST00000585506 LOC105371045A0A1W2PR82 267 aa13.19□□□□□ -0.3
PLEKHM1-213ENST00000585506 NACADO15069 1562 aa13.17□□□□□ -0.3
PLEKHM1-213ENST00000585506 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
PLEKHM1-213ENST00000585506 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
PLEKHM1-213ENST00000585506 TRIM41Q8WV44 630 aa13.02□□□□□ -0.33
PLEKHM1-213ENST00000585506 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
PLEKHM1-213ENST00000585506 MYT1Q01538 1121 aa12.99□□□□□ -0.33
PLEKHM1-213ENST00000585506 SCAF1Q9H7N4 1312 aaKnown RBP12.89□□□□□ -0.35
PLEKHM1-213ENST00000585506 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
PLEKHM1-213ENST00000585506 ACIN1Q9UKV3 1341 aaKnown RBP12.81□□□□□ -0.36
PLEKHM1-213ENST00000585506 CENPBP07199 599 aaPredicted RBP12.8□□□□□ -0.36
PLEKHM1-213ENST00000585506 MROH2BQ7Z745 1585 aa12.8□□□□□ -0.36
PLEKHM1-213ENST00000585506 WRNQ14191 1432 aaPredicted RBP eCLIP12.79□□□□□ -0.36
PLEKHM1-213ENST00000585506 EIF4G1Q04637 1599 aaKnown RBP12.79□□□□□ -0.36
PLEKHM1-213ENST00000585506 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
PLEKHM1-213ENST00000585506 FAM9AQ8IZU1 332 aaPredicted RBP12.72□□□□□ -0.37
PLEKHM1-213ENST00000585506 TOP2AP11388 1531 aaKnown RBP12.72□□□□□ -0.37
PLEKHM1-213ENST00000585506 CCER1Q8TC90 406 aaPredicted RBP12.71□□□□□ -0.37
PLEKHM1-213ENST00000585506 EEA1Q15075 1411 aa12.7□□□□□ -0.38
PLEKHM1-213ENST00000585506 WIZO95785 1651 aa12.69□□□□□ -0.38
PLEKHM1-213ENST00000585506 DIEXFQ68CQ4 756 aaKnown RBP12.65□□□□□ -0.38
PLEKHM1-213ENST00000585506 SMARCA4P51532 1647 aa12.64□□□□□ -0.39
PLEKHM1-213ENST00000585506 TNIKQ9UKE5 1360 aa12.63□□□□□ -0.39
PLEKHM1-213ENST00000585506 NEUROD1Q13562 356 aa12.62□□□□□ -0.39
PLEKHM1-213ENST00000585506 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
PLEKHM1-213ENST00000585506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.59□□□□□ -0.39
PLEKHM1-213ENST00000585506 SMARCA2P51531 1590 aa12.57□□□□□ -0.4
PLEKHM1-213ENST00000585506 CEP162Q5TB80 1403 aa12.56□□□□□ -0.4
PLEKHM1-213ENST00000585506 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
PLEKHM1-213ENST00000585506 ZNF316A6NFI3 1004 aaPredicted RBP12.55□□□□□ -0.4
PLEKHM1-213ENST00000585506 UNC13AQ9UPW8 1703 aa12.51□□□□□ -0.41
PLEKHM1-213ENST00000585506 CLSPNQ9HAW4 1339 aa12.51□□□□□ -0.41
PLEKHM1-213ENST00000585506 CCDC88BA6NC98 1476 aa12.51□□□□□ -0.41
PLEKHM1-213ENST00000585506 GOLGA3Q08378 1498 aa12.49□□□□□ -0.41
PLEKHM1-213ENST00000585506 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
PLEKHM1-213ENST00000585506 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
PLEKHM1-213ENST00000585506 KIF21BO75037 1637 aa12.41□□□□□ -0.42
PLEKHM1-213ENST00000585506 CEP164Q9UPV0 1460 aa12.4□□□□□ -0.42
PLEKHM1-213ENST00000585506 ABCC8Q09428 1581 aa12.4□□□□□ -0.42
PLEKHM1-213ENST00000585506 BICRAQ9NZM4 1560 aa12.39□□□□□ -0.43
PLEKHM1-213ENST00000585506 BAZ1BQ9UIG0 1483 aaKnown RBP12.39□□□□□ -0.43
PLEKHM1-213ENST00000585506 SOGA1O94964 1423 aa12.37□□□□□ -0.43
PLEKHM1-213ENST00000585506 VPS8Q8N3P4 1428 aa12.32□□□□□ -0.44
PLEKHM1-213ENST00000585506 UBTFP17480 764 aaKnown RBP12.32□□□□□ -0.44
PLEKHM1-213ENST00000585506 CLIP1P30622 1438 aa12.29□□□□□ -0.44
PLEKHM1-213ENST00000585506 ATAD2BQ9ULI0 1458 aa12.27□□□□□ -0.44
PLEKHM1-213ENST00000585506 MIER1Q8N108 512 aa12.26□□□□□ -0.45
PLEKHM1-213ENST00000585506 APLP2Q06481 763 aa12.25□□□□□ -0.45
PLEKHM1-213ENST00000585506 RUSC2Q8N2Y8 1516 aa12.25□□□□□ -0.45
PLEKHM1-213ENST00000585506 ERICH3Q5RHP9 1530 aa12.21□□□□□ -0.45
PLEKHM1-213ENST00000585506 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
PLEKHM1-213ENST00000585506 SYNJ1O43426 1573 aa12.21□□□□□ -0.46
PLEKHM1-213ENST00000585506 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
PLEKHM1-213ENST00000585506 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
PLEKHM1-213ENST00000585506 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
PLEKHM1-213ENST00000585506 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
PLEKHM1-213ENST00000585506 HNRNPUL2Q1KMD3 747 aaKnown RBP12.16□□□□□ -0.46
PLEKHM1-213ENST00000585506 CUX2O14529 1486 aa12.15□□□□□ -0.46
PLEKHM1-213ENST00000585506 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
PLEKHM1-213ENST00000585506 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
PLEKHM1-213ENST00000585506 RRBP1Q9P2E9 1410 aaKnown RBP12.11□□□□□ -0.47
PLEKHM1-213ENST00000585506 PRXQ9BXM0 1461 aa12.1□□□□□ -0.47
PLEKHM1-213ENST00000585506 RAPGEF2Q9Y4G8 1499 aa12.1□□□□□ -0.47
PLEKHM1-213ENST00000585506 SUPT16HQ9Y5B9 1047 aaKnown RBP12.08□□□□□ -0.48
PLEKHM1-213ENST00000585506 ARAP1Q96P48 1450 aa12.04□□□□□ -0.48
PLEKHM1-213ENST00000585506 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
PLEKHM1-213ENST00000585506 MAP3K1Q13233 1512 aa12.02□□□□□ -0.48
PLEKHM1-213ENST00000585506 CFTRP13569 1480 aa12.02□□□□□ -0.49
PLEKHM1-213ENST00000585506 PABPN1Q86U42 306 aaKnown RBP eCLIP12□□□□□ -0.49
PLEKHM1-213ENST00000585506 KIF27Q86VH2 1401 aa12□□□□□ -0.49
PLEKHM1-213ENST00000585506 ANP32EQ9BTT0 268 aa11.99□□□□□ -0.49
PLEKHM1-213ENST00000585506 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
PLEKHM1-213ENST00000585506 CCNB3Q8WWL7 1395 aa11.98□□□□□ -0.49
PLEKHM1-213ENST00000585506 TSHZ2Q9NRE2 1034 aa11.97□□□□□ -0.49
PLEKHM1-213ENST00000585506 CUX1P39880 1505 aa11.95□□□□□ -0.5
PLEKHM1-213ENST00000585506 CCER2I3L3R5 266 aa11.89□□□□□ -0.51
PLEKHM1-213ENST00000585506 SETD5Q9C0A6 1442 aa11.88□□□□□ -0.51
PLEKHM1-213ENST00000585506 KANK4Q5T7N3 995 aaPredicted RBP11.88□□□□□ -0.51
PLEKHM1-213ENST00000585506 ARHGAP35Q9NRY4 1499 aa11.88□□□□□ -0.51
PLEKHM1-213ENST00000585506 MAPKBP1O60336 1514 aa11.87□□□□□ -0.51
PLEKHM1-213ENST00000585506 NEFLP07196 543 aa11.86□□□□□ -0.51
PLEKHM1-213ENST00000585506 RAB3GAP2Q9H2M9 1393 aa11.86□□□□□ -0.51
PLEKHM1-213ENST00000585506 TIAM1Q13009 1591 aa11.86□□□□□ -0.51
PLEKHM1-213ENST00000585506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms