RNA–Protein interactions for RNA: ENST00000584506.1

CDH8-212, Transcript of cadherin 8, humanhuman

TSL 4

Gene CDH8, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-212ENST00000584506 AEBP2Q6ZN18 517 aaPredicted RBP19.22■□□□□ 0.67
CDH8-212ENST00000584506 CHIC1Q5VXU3 224 aa18.39■□□□□ 0.53
CDH8-212ENST00000584506 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
CDH8-212ENST00000584506 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
CDH8-212ENST00000584506 FOXD1Q16676 465 aa15.29■□□□□ 0.04
CDH8-212ENST00000584506 NISCHQ9Y2I1 1504 aa15.26■□□□□ 0.03
CDH8-212ENST00000584506 PLPPR3Q6T4P5 718 aa14.76□□□□□ -0.05
CDH8-212ENST00000584506 MSH5O43196 834 aa14.37□□□□□ -0.11
CDH8-212ENST00000584506 PIAS4Q8N2W9 510 aaPredicted RBP14.34□□□□□ -0.11
CDH8-212ENST00000584506 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
CDH8-212ENST00000584506 ADRA2BP18089 450 aa14.29□□□□□ -0.12
CDH8-212ENST00000584506 POTEDQ86YR6 584 aa13.82□□□□□ -0.2
CDH8-212ENST00000584506 CCDC180Q9P1Z9 1646 aa13.42□□□□□ -0.26
CDH8-212ENST00000584506 SCAF1Q9H7N4 1312 aaKnown RBP13.2□□□□□ -0.3
CDH8-212ENST00000584506 MAPK8IP2Q13387 824 aaPredicted RBP13.08□□□□□ -0.32
CDH8-212ENST00000584506 DMRT2Q9Y5R5 561 aa13.06□□□□□ -0.32
CDH8-212ENST00000584506 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
CDH8-212ENST00000584506 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
CDH8-212ENST00000584506 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
CDH8-212ENST00000584506 ABCC9O60706 1549 aa12.67□□□□□ -0.38
CDH8-212ENST00000584506 DCAF1Q9Y4B6 1507 aa12.66□□□□□ -0.38
CDH8-212ENST00000584506 DCAF8L2P0C7V8 631 aa12.62□□□□□ -0.39
CDH8-212ENST00000584506 HOXD11P31277 338 aaPredicted RBP12.61□□□□□ -0.39
CDH8-212ENST00000584506 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
CDH8-212ENST00000584506 MYO15BQ96JP2 1530 aa12.55□□□□□ -0.4
CDH8-212ENST00000584506 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
CDH8-212ENST00000584506 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
CDH8-212ENST00000584506 NACADO15069 1562 aa12.5□□□□□ -0.41
CDH8-212ENST00000584506 RB1CC1Q8TDY2 1594 aa12.42□□□□□ -0.42
CDH8-212ENST00000584506 KCNA4P22459 653 aa12.41□□□□□ -0.42
CDH8-212ENST00000584506 NPM3O75607 178 aaKnown RBP12.35□□□□□ -0.43
CDH8-212ENST00000584506 SHROOM4Q9ULL8 1493 aa12.3□□□□□ -0.44
CDH8-212ENST00000584506 CACNB1Q02641 598 aaPredicted RBP12.25□□□□□ -0.45
CDH8-212ENST00000584506 SCRIBQ14160 1630 aa12.25□□□□□ -0.45
CDH8-212ENST00000584506 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
CDH8-212ENST00000584506 RNF39Q9H2S5 420 aa12.22□□□□□ -0.45
CDH8-212ENST00000584506 UNC13AQ9UPW8 1703 aa12.17□□□□□ -0.46
CDH8-212ENST00000584506 C1QBPQ07021 282 aaKnown RBP12.09□□□□□ -0.47
CDH8-212ENST00000584506 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.03□□□□□ -0.48
CDH8-212ENST00000584506 BICRAQ9NZM4 1560 aa11.98□□□□□ -0.49
CDH8-212ENST00000584506 PABPN1Q86U42 306 aaKnown RBP eCLIP11.9□□□□□ -0.5
CDH8-212ENST00000584506 SUPT5HO00267 1087 aaKnown RBP11.84□□□□□ -0.51
CDH8-212ENST00000584506 BAZ1AQ9NRL2 1556 aaPredicted RBP11.82□□□□□ -0.52
CDH8-212ENST00000584506 CECR2Q9BXF3 1484 aa11.82□□□□□ -0.52
CDH8-212ENST00000584506 RSF1Q96T23 1441 aaPredicted RBP11.77□□□□□ -0.53
CDH8-212ENST00000584506 SMARCA4P51532 1647 aa11.76□□□□□ -0.53
CDH8-212ENST00000584506 MROH2BQ7Z745 1585 aa11.75□□□□□ -0.53
CDH8-212ENST00000584506 SLC4A1APQ9BWU0 796 aaKnown RBP11.74□□□□□ -0.53
CDH8-212ENST00000584506 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
CDH8-212ENST00000584506 SLC4A2P04920 1241 aa11.73□□□□□ -0.53
CDH8-212ENST00000584506 WIZO95785 1651 aa11.68□□□□□ -0.54
CDH8-212ENST00000584506 EIF4G1Q04637 1599 aaKnown RBP11.64□□□□□ -0.55
CDH8-212ENST00000584506 PEG3Q9GZU2 1588 aa11.63□□□□□ -0.55
CDH8-212ENST00000584506 SMARCA2P51531 1590 aa11.61□□□□□ -0.55
CDH8-212ENST00000584506 TOP2AP11388 1531 aaKnown RBP11.57□□□□□ -0.56
CDH8-212ENST00000584506 ATAD2BQ9ULI0 1458 aa11.57□□□□□ -0.56
CDH8-212ENST00000584506 CAPN15O75808 1086 aa11.56□□□□□ -0.56
CDH8-212ENST00000584506 APLP2Q06481 763 aa11.55□□□□□ -0.56
CDH8-212ENST00000584506 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.54□□□□□ -0.56
CDH8-212ENST00000584506 HNRNPUL2Q1KMD3 747 aaKnown RBP11.54□□□□□ -0.56
CDH8-212ENST00000584506 SPINK5Q9NQ38 1064 aaPredicted RBP11.53□□□□□ -0.56
CDH8-212ENST00000584506 BAZ1BQ9UIG0 1483 aaKnown RBP11.51□□□□□ -0.57
CDH8-212ENST00000584506 NCAPD3P42695 1498 aa11.51□□□□□ -0.57
CDH8-212ENST00000584506 CC2D2AQ9P2K1 1620 aa11.5□□□□□ -0.57
CDH8-212ENST00000584506 HMGXB3Q12766 1538 aa11.49□□□□□ -0.57
CDH8-212ENST00000584506 SAMD1Q6SPF0 538 aaPredicted RBP11.46□□□□□ -0.57
CDH8-212ENST00000584506 DSG3P32926 999 aa11.45□□□□□ -0.58
CDH8-212ENST00000584506 ZBTB22O15209 634 aa11.44□□□□□ -0.58
CDH8-212ENST00000584506 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
CDH8-212ENST00000584506 ZNF219Q9P2Y4 722 aaPredicted RBP11.42□□□□□ -0.58
CDH8-212ENST00000584506 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
CDH8-212ENST00000584506 MYCNP04198 464 aaPredicted RBP11.39□□□□□ -0.59
CDH8-212ENST00000584506 TRHP20396 242 aaPredicted RBP11.37□□□□□ -0.59
CDH8-212ENST00000584506 ABCB7O75027 752 aa11.26□□□□□ -0.61
CDH8-212ENST00000584506 PRDM2Q13029 1718 aa11.26□□□□□ -0.61
CDH8-212ENST00000584506 CFTRP13569 1480 aa11.2□□□□□ -0.62
CDH8-212ENST00000584506 CADPSQ9ULU8 1353 aa11.19□□□□□ -0.62
CDH8-212ENST00000584506 TRIM41Q8WV44 630 aa11.18□□□□□ -0.62
CDH8-212ENST00000584506 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
CDH8-212ENST00000584506 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
CDH8-212ENST00000584506 LAMC3Q9Y6N6 1575 aa11.16□□□□□ -0.62
CDH8-212ENST00000584506 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
CDH8-212ENST00000584506 ABCC8Q09428 1581 aa11.14□□□□□ -0.63
CDH8-212ENST00000584506 WRNQ14191 1432 aaPredicted RBP eCLIP11.11□□□□□ -0.63
CDH8-212ENST00000584506 POLA2Q14181 598 aa11.09□□□□□ -0.63
CDH8-212ENST00000584506 NESP48681 1621 aa11.08□□□□□ -0.64
CDH8-212ENST00000584506 PDS5BQ9NTI5 1447 aa11.07□□□□□ -0.64
CDH8-212ENST00000584506 FANCD2Q9BXW9 1451 aa11.06□□□□□ -0.64
CDH8-212ENST00000584506 BIVM-ERCC5R4GMW8 1640 aa11.06□□□□□ -0.64
CDH8-212ENST00000584506 SYNJ1O43426 1573 aa11.05□□□□□ -0.64
CDH8-212ENST00000584506 ATXN8OSP0DMR3 200 aa11.05□□□□□ -0.64
CDH8-212ENST00000584506 TOP2BQ02880 1626 aa11.05□□□□□ -0.64
CDH8-212ENST00000584506 CEP164Q9UPV0 1460 aa11.02□□□□□ -0.65
CDH8-212ENST00000584506 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
CDH8-212ENST00000584506 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
CDH8-212ENST00000584506 CUX1P39880 1505 aa10.99□□□□□ -0.65
CDH8-212ENST00000584506 DNMBPQ6XZF7 1577 aa10.98□□□□□ -0.65
CDH8-212ENST00000584506 ZBTB12Q9Y330 459 aaPredicted RBP10.96□□□□□ -0.65
CDH8-212ENST00000584506 EEA1Q15075 1411 aa10.95□□□□□ -0.66
CDH8-212ENST00000584506 TOPBP1Q92547 1522 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms