RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 AEBP2Q6ZN18 517 aaPredicted RBP22.48■■□□□ 1.19
NF1-222ENST00000582892 CHIC1Q5VXU3 224 aa22.02■■□□□ 1.12
NF1-222ENST00000582892 SENP3Q9H4L4 574 aaPredicted RBP19.3■□□□□ 0.68
NF1-222ENST00000582892 PHF23Q9BUL5 403 aaPredicted RBP19.24■□□□□ 0.67
NF1-222ENST00000582892 NISCHQ9Y2I1 1504 aa18.57■□□□□ 0.56
NF1-222ENST00000582892 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
NF1-222ENST00000582892 FOXD1Q16676 465 aa17.79■□□□□ 0.44
NF1-222ENST00000582892 ABCC9O60706 1549 aa17.51■□□□□ 0.39
NF1-222ENST00000582892 ADRA2BP18089 450 aa17.01■□□□□ 0.31
NF1-222ENST00000582892 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
NF1-222ENST00000582892 DNAJC5BQ9UF47 199 aa16.93■□□□□ 0.3
NF1-222ENST00000582892 CCDC180Q9P1Z9 1646 aa16.9■□□□□ 0.3
NF1-222ENST00000582892 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
NF1-222ENST00000582892 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
NF1-222ENST00000582892 MSH5O43196 834 aa16.61■□□□□ 0.25
NF1-222ENST00000582892 RB1CC1Q8TDY2 1594 aa16.32■□□□□ 0.2
NF1-222ENST00000582892 PABPN1Q86U42 306 aaKnown RBP eCLIP16.19■□□□□ 0.18
NF1-222ENST00000582892 UNC13AQ9UPW8 1703 aa16.14■□□□□ 0.17
NF1-222ENST00000582892 NACADO15069 1562 aa16.04■□□□□ 0.16
NF1-222ENST00000582892 BICRAQ9NZM4 1560 aa15.99■□□□□ 0.15
NF1-222ENST00000582892 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
NF1-222ENST00000582892 DNAJC5Q9H3Z4 198 aa15.81■□□□□ 0.12
NF1-222ENST00000582892 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
NF1-222ENST00000582892 CC2D2AQ9P2K1 1620 aa15.77■□□□□ 0.12
NF1-222ENST00000582892 CECR2Q9BXF3 1484 aa15.77■□□□□ 0.11
NF1-222ENST00000582892 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
NF1-222ENST00000582892 MYO15BQ96JP2 1530 aa15.59■□□□□ 0.09
NF1-222ENST00000582892 EIF4G1Q04637 1599 aaKnown RBP15.58■□□□□ 0.09
NF1-222ENST00000582892 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
NF1-222ENST00000582892 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
NF1-222ENST00000582892 NCBP3Q53F19 620 aaKnown RBP15.43■□□□□ 0.06
NF1-222ENST00000582892 MAPK8IP2Q13387 824 aaPredicted RBP15.41■□□□□ 0.06
NF1-222ENST00000582892 CNKSR2Q8WXI2 1034 aa15.36■□□□□ 0.05
NF1-222ENST00000582892 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
NF1-222ENST00000582892 ZCCHC6Q5VYS8 1495 aaKnown RBP15.29■□□□□ 0.04
NF1-222ENST00000582892 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
NF1-222ENST00000582892 KCNA4P22459 653 aa15.19■□□□□ 0.02
NF1-222ENST00000582892 CUX2O14529 1486 aa15.19■□□□□ 0.02
NF1-222ENST00000582892 ERCC6Q03468 1493 aa15.08■□□□□ 0
NF1-222ENST00000582892 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
NF1-222ENST00000582892 NPM3O75607 178 aaKnown RBP15.03■□□□□ -0
NF1-222ENST00000582892 HOXD11P31277 338 aaPredicted RBP14.99□□□□□ -0.01
NF1-222ENST00000582892 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
NF1-222ENST00000582892 NESP48681 1621 aa14.92□□□□□ -0.02
NF1-222ENST00000582892 THOC2Q8NI27 1593 aaKnown RBP14.85□□□□□ -0.03
NF1-222ENST00000582892 NCAPD3P42695 1498 aa14.82□□□□□ -0.04
NF1-222ENST00000582892 ATAD2BQ9ULI0 1458 aa14.76□□□□□ -0.05
NF1-222ENST00000582892 SMARCA2P51531 1590 aa14.75□□□□□ -0.05
NF1-222ENST00000582892 KIF21AQ7Z4S6 1674 aa14.74□□□□□ -0.05
NF1-222ENST00000582892 DCAF8L1A6NGE4 600 aa14.71□□□□□ -0.05
NF1-222ENST00000582892 HMGXB3Q12766 1538 aa14.7□□□□□ -0.06
NF1-222ENST00000582892 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
NF1-222ENST00000582892 LAMC3Q9Y6N6 1575 aa14.6□□□□□ -0.07
NF1-222ENST00000582892 BAZ1BQ9UIG0 1483 aaKnown RBP14.57□□□□□ -0.08
NF1-222ENST00000582892 BAZ1AQ9NRL2 1556 aaPredicted RBP14.56□□□□□ -0.08
NF1-222ENST00000582892 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
NF1-222ENST00000582892 PDS5BQ9NTI5 1447 aa14.47□□□□□ -0.09
NF1-222ENST00000582892 WDR62O43379 1518 aa14.46□□□□□ -0.1
NF1-222ENST00000582892 MRC2Q9UBG0 1479 aa14.45□□□□□ -0.1
NF1-222ENST00000582892 PEG3Q9GZU2 1588 aa14.45□□□□□ -0.1
NF1-222ENST00000582892 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
NF1-222ENST00000582892 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
NF1-222ENST00000582892 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
NF1-222ENST00000582892 MROH2BQ7Z745 1585 aa14.37□□□□□ -0.11
NF1-222ENST00000582892 OSCARQ8IYS5 282 aa14.36□□□□□ -0.11
NF1-222ENST00000582892 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
NF1-222ENST00000582892 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
NF1-222ENST00000582892 CEP164Q9UPV0 1460 aa14.29□□□□□ -0.12
NF1-222ENST00000582892 ARHGEF11O15085 1522 aa14.26□□□□□ -0.13
NF1-222ENST00000582892 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
NF1-222ENST00000582892 FANCD2Q9BXW9 1451 aa14.24□□□□□ -0.13
NF1-222ENST00000582892 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.13
NF1-222ENST00000582892 WIZO95785 1651 aa14.2□□□□□ -0.14
NF1-222ENST00000582892 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
NF1-222ENST00000582892 ZNF608Q9ULD9 1512 aaPredicted RBP14.15□□□□□ -0.14
NF1-222ENST00000582892 TRHP20396 242 aaPredicted RBP14.14□□□□□ -0.15
NF1-222ENST00000582892 CYB5RLQ6IPT4 315 aa14.14□□□□□ -0.15
NF1-222ENST00000582892 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
NF1-222ENST00000582892 FOXD4L1Q9NU39 408 aa14.11□□□□□ -0.15
NF1-222ENST00000582892 ARAP1Q96P48 1450 aa14.11□□□□□ -0.15
NF1-222ENST00000582892 CFTRP13569 1480 aa14.09□□□□□ -0.15
NF1-222ENST00000582892 CHD1O14646 1710 aa14.08□□□□□ -0.16
NF1-222ENST00000582892 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
NF1-222ENST00000582892 EIF4G3O43432 1585 aaKnown RBP14.04□□□□□ -0.16
NF1-222ENST00000582892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.01□□□□□ -0.17
NF1-222ENST00000582892 HNRNPUL2Q1KMD3 747 aaKnown RBP14.01□□□□□ -0.17
NF1-222ENST00000582892 PRDM2Q13029 1718 aa14.01□□□□□ -0.17
NF1-222ENST00000582892 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
NF1-222ENST00000582892 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
NF1-222ENST00000582892 IFT140Q96RY7 1462 aa13.99□□□□□ -0.17
NF1-222ENST00000582892 EHMT2Q96KQ7 1210 aa13.96□□□□□ -0.17
NF1-222ENST00000582892 APLP2Q06481 763 aa13.94□□□□□ -0.18
NF1-222ENST00000582892 TOPBP1Q92547 1522 aa13.93□□□□□ -0.18
NF1-222ENST00000582892 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.18
NF1-222ENST00000582892 TOP2AP11388 1531 aaKnown RBP13.9□□□□□ -0.18
NF1-222ENST00000582892 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
NF1-222ENST00000582892 RSF1Q96T23 1441 aaPredicted RBP13.9□□□□□ -0.19
NF1-222ENST00000582892 ZBTB22O15209 634 aa13.89□□□□□ -0.19
NF1-222ENST00000582892 TARBP1Q13395 1621 aaKnown RBP13.89□□□□□ -0.19
NF1-222ENST00000582892 FBLN2P98095 1184 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms