RNA–Protein interactions for RNA: ENST00000582322.1

SOCS6-203, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SOCS6, Length 2,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-203ENST00000582322 NISCHQ9Y2I1 1504 aa17.8■□□□□ 0.44
SOCS6-203ENST00000582322 CCDC180Q9P1Z9 1646 aa15.72■□□□□ 0.11
SOCS6-203ENST00000582322 ABCC9O60706 1549 aa15.72■□□□□ 0.11
SOCS6-203ENST00000582322 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
SOCS6-203ENST00000582322 RB1CC1Q8TDY2 1594 aa14.86□□□□□ -0.03
SOCS6-203ENST00000582322 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
SOCS6-203ENST00000582322 NACADO15069 1562 aa14.78□□□□□ -0.04
SOCS6-203ENST00000582322 PABPN1Q86U42 306 aaKnown RBP eCLIP14.76□□□□□ -0.05
SOCS6-203ENST00000582322 UNC13AQ9UPW8 1703 aa14.73□□□□□ -0.05
SOCS6-203ENST00000582322 SHROOM4Q9ULL8 1493 aa14.66□□□□□ -0.06
SOCS6-203ENST00000582322 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
SOCS6-203ENST00000582322 HRCP23327 699 aa14.56□□□□□ -0.08
SOCS6-203ENST00000582322 SUPT5HO00267 1087 aaKnown RBP14.53□□□□□ -0.08
SOCS6-203ENST00000582322 MYO15BQ96JP2 1530 aa14.52□□□□□ -0.08
SOCS6-203ENST00000582322 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.09
SOCS6-203ENST00000582322 BICRAQ9NZM4 1560 aa14.51□□□□□ -0.09
SOCS6-203ENST00000582322 DNAJC5BQ9UF47 199 aa14.49□□□□□ -0.09
SOCS6-203ENST00000582322 CHIC1Q5VXU3 224 aa14.32□□□□□ -0.12
SOCS6-203ENST00000582322 PCGF6Q9BYE7 350 aa14.26□□□□□ -0.13
SOCS6-203ENST00000582322 PPARGC1BQ86YN6 1023 aaKnown RBP14.16□□□□□ -0.14
SOCS6-203ENST00000582322 EIF4G1Q04637 1599 aaKnown RBP14.12□□□□□ -0.15
SOCS6-203ENST00000582322 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
SOCS6-203ENST00000582322 CECR2Q9BXF3 1484 aa14.04□□□□□ -0.16
SOCS6-203ENST00000582322 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
SOCS6-203ENST00000582322 LOC105371045A0A1W2PR82 267 aa13.89□□□□□ -0.19
SOCS6-203ENST00000582322 PELP1Q8IZL8 1130 aaKnown RBP13.89□□□□□ -0.19
SOCS6-203ENST00000582322 SMARCA4P51532 1647 aa13.86□□□□□ -0.19
SOCS6-203ENST00000582322 MROH2BQ7Z745 1585 aa13.84□□□□□ -0.19
SOCS6-203ENST00000582322 ZEB1P37275 1124 aaPredicted RBP13.8□□□□□ -0.2
SOCS6-203ENST00000582322 BAZ1AQ9NRL2 1556 aaPredicted RBP13.76□□□□□ -0.21
SOCS6-203ENST00000582322 ATAD2BQ9ULI0 1458 aa13.76□□□□□ -0.21
SOCS6-203ENST00000582322 WIZO95785 1651 aa13.75□□□□□ -0.21
SOCS6-203ENST00000582322 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
SOCS6-203ENST00000582322 SMARCA2P51531 1590 aa13.66□□□□□ -0.22
SOCS6-203ENST00000582322 NCAPD3P42695 1498 aa13.65□□□□□ -0.22
SOCS6-203ENST00000582322 SCAF1Q9H7N4 1312 aaKnown RBP13.65□□□□□ -0.22
SOCS6-203ENST00000582322 NESP48681 1621 aa13.62□□□□□ -0.23
SOCS6-203ENST00000582322 RSF1Q96T23 1441 aaPredicted RBP13.61□□□□□ -0.23
SOCS6-203ENST00000582322 HMGXB3Q12766 1538 aa13.58□□□□□ -0.24
SOCS6-203ENST00000582322 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
SOCS6-203ENST00000582322 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
SOCS6-203ENST00000582322 ERCC6Q03468 1493 aa13.47□□□□□ -0.25
SOCS6-203ENST00000582322 KIF21AQ7Z4S6 1674 aa13.42□□□□□ -0.26
SOCS6-203ENST00000582322 TOP2AP11388 1531 aaKnown RBP13.42□□□□□ -0.26
SOCS6-203ENST00000582322 FAM9AQ8IZU1 332 aaPredicted RBP13.41□□□□□ -0.26
SOCS6-203ENST00000582322 ACIN1Q9UKV3 1341 aaKnown RBP13.39□□□□□ -0.27
SOCS6-203ENST00000582322 CCDC88BA6NC98 1476 aa13.35□□□□□ -0.27
SOCS6-203ENST00000582322 MYT1Q01538 1121 aa13.33□□□□□ -0.28
SOCS6-203ENST00000582322 CADPSQ9ULU8 1353 aa13.32□□□□□ -0.28
SOCS6-203ENST00000582322 LAMC3Q9Y6N6 1575 aa13.32□□□□□ -0.28
SOCS6-203ENST00000582322 NEUROD1Q13562 356 aa13.32□□□□□ -0.28
SOCS6-203ENST00000582322 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
SOCS6-203ENST00000582322 CENPBP07199 599 aaPredicted RBP13.27□□□□□ -0.28
SOCS6-203ENST00000582322 CCER1Q8TC90 406 aaPredicted RBP13.27□□□□□ -0.28
SOCS6-203ENST00000582322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
SOCS6-203ENST00000582322 THOC2Q8NI27 1593 aaKnown RBP13.26□□□□□ -0.29
SOCS6-203ENST00000582322 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
SOCS6-203ENST00000582322 FANCD2Q9BXW9 1451 aa13.23□□□□□ -0.29
SOCS6-203ENST00000582322 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
SOCS6-203ENST00000582322 DIEXFQ68CQ4 756 aaKnown RBP13.23□□□□□ -0.29
SOCS6-203ENST00000582322 CFTRP13569 1480 aa13.22□□□□□ -0.29
SOCS6-203ENST00000582322 CEP164Q9UPV0 1460 aa13.2□□□□□ -0.3
SOCS6-203ENST00000582322 PRDM2Q13029 1718 aa13.15□□□□□ -0.3
SOCS6-203ENST00000582322 MRC2Q9UBG0 1479 aa13.14□□□□□ -0.31
SOCS6-203ENST00000582322 URB2Q14146 1524 aaKnown RBP13.14□□□□□ -0.31
SOCS6-203ENST00000582322 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
SOCS6-203ENST00000582322 CUX2O14529 1486 aa13.12□□□□□ -0.31
SOCS6-203ENST00000582322 WDR62O43379 1518 aa13.08□□□□□ -0.31
SOCS6-203ENST00000582322 CEP162Q5TB80 1403 aa13.03□□□□□ -0.32
SOCS6-203ENST00000582322 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
SOCS6-203ENST00000582322 TOPBP1Q92547 1522 aa13.02□□□□□ -0.33
SOCS6-203ENST00000582322 ABCC8Q09428 1581 aa13.02□□□□□ -0.33
SOCS6-203ENST00000582322 ZNF608Q9ULD9 1512 aaPredicted RBP12.99□□□□□ -0.33
SOCS6-203ENST00000582322 RAD54L2Q9Y4B4 1467 aa12.98□□□□□ -0.33
SOCS6-203ENST00000582322 TTBK1Q5TCY1 1321 aaPredicted RBP12.97□□□□□ -0.33
SOCS6-203ENST00000582322 TNIKQ9UKE5 1360 aa12.97□□□□□ -0.33
SOCS6-203ENST00000582322 CUX1P39880 1505 aa12.96□□□□□ -0.34
SOCS6-203ENST00000582322 DNMBPQ6XZF7 1577 aa12.95□□□□□ -0.34
SOCS6-203ENST00000582322 YTHDC1Q96MU7 727 aaKnown RBP12.94□□□□□ -0.34
SOCS6-203ENST00000582322 POLA1P09884 1462 aaPredicted RBP12.92□□□□□ -0.34
SOCS6-203ENST00000582322 AQRO60306 1485 aaKnown RBP eCLIP12.92□□□□□ -0.34
SOCS6-203ENST00000582322 EEA1Q15075 1411 aa12.92□□□□□ -0.34
SOCS6-203ENST00000582322 FGD5Q6ZNL6 1462 aa12.91□□□□□ -0.34
SOCS6-203ENST00000582322 TDRD9Q8NDG6 1382 aaKnown RBP12.9□□□□□ -0.34
SOCS6-203ENST00000582322 SOGA1O94964 1423 aa12.89□□□□□ -0.35
SOCS6-203ENST00000582322 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
SOCS6-203ENST00000582322 EIF4G3O43432 1585 aaKnown RBP12.88□□□□□ -0.35
SOCS6-203ENST00000582322 MIER1Q8N108 512 aa12.88□□□□□ -0.35
SOCS6-203ENST00000582322 FBLN2P98095 1184 aa12.87□□□□□ -0.35
SOCS6-203ENST00000582322 TARBP1Q13395 1621 aaKnown RBP12.87□□□□□ -0.35
SOCS6-203ENST00000582322 DNAJC5Q9H3Z4 198 aa12.86□□□□□ -0.35
SOCS6-203ENST00000582322 GOLGA3Q08378 1498 aa12.85□□□□□ -0.35
SOCS6-203ENST00000582322 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
SOCS6-203ENST00000582322 CSRNP3Q8WYN3 585 aa12.83□□□□□ -0.36
SOCS6-203ENST00000582322 UBTFP17480 764 aaKnown RBP12.81□□□□□ -0.36
SOCS6-203ENST00000582322 RUSC2Q8N2Y8 1516 aa12.78□□□□□ -0.36
SOCS6-203ENST00000582322 CHD1O14646 1710 aa12.78□□□□□ -0.36
SOCS6-203ENST00000582322 CLSPNQ9HAW4 1339 aa12.78□□□□□ -0.36
SOCS6-203ENST00000582322 TOP2BQ02880 1626 aa12.76□□□□□ -0.37
SOCS6-203ENST00000582322 HNRNPUL2Q1KMD3 747 aaKnown RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms