RNA–Protein interactions for RNA: ENST00000580967.1

LINC01443-201, Transcript of long intergenic non-protein coding RNA 1443, humanhuman

TSL 1 (best)

Gene LINC01443, Length 1,783 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01443-201ENST00000580967 NISCHQ9Y2I1 1504 aa18.77■□□□□ 0.6
LINC01443-201ENST00000580967 CHIC1Q5VXU3 224 aa17.62■□□□□ 0.41
LINC01443-201ENST00000580967 CCDC180Q9P1Z9 1646 aa16.58■□□□□ 0.24
LINC01443-201ENST00000580967 AEBP2Q6ZN18 517 aaPredicted RBP16.57■□□□□ 0.24
LINC01443-201ENST00000580967 ABCC9O60706 1549 aa16.25■□□□□ 0.19
LINC01443-201ENST00000580967 SLC24A1O60721 1099 aa16.08■□□□□ 0.16
LINC01443-201ENST00000580967 DCAF8L2P0C7V8 631 aa15.85■□□□□ 0.13
LINC01443-201ENST00000580967 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
LINC01443-201ENST00000580967 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
LINC01443-201ENST00000580967 ZCCHC6Q5VYS8 1495 aaKnown RBP15.64■□□□□ 0.09
LINC01443-201ENST00000580967 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
LINC01443-201ENST00000580967 NACADO15069 1562 aa15.58■□□□□ 0.08
LINC01443-201ENST00000580967 MYO15BQ96JP2 1530 aa15.46■□□□□ 0.07
LINC01443-201ENST00000580967 DCAF1Q9Y4B6 1507 aa15.46■□□□□ 0.07
LINC01443-201ENST00000580967 UNC13AQ9UPW8 1703 aa15.26■□□□□ 0.03
LINC01443-201ENST00000580967 PABPN1Q86U42 306 aaKnown RBP eCLIP15.26■□□□□ 0.03
LINC01443-201ENST00000580967 SCRIBQ14160 1630 aa15.25■□□□□ 0.03
LINC01443-201ENST00000580967 PELP1Q8IZL8 1130 aaKnown RBP15.21■□□□□ 0.02
LINC01443-201ENST00000580967 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
LINC01443-201ENST00000580967 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
LINC01443-201ENST00000580967 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
LINC01443-201ENST00000580967 MYT1Q01538 1121 aa14.96□□□□□ -0.02
LINC01443-201ENST00000580967 RTN4Q9NQC3 1192 aaKnown RBP14.86□□□□□ -0.03
LINC01443-201ENST00000580967 CSRNP3Q8WYN3 585 aa14.85□□□□□ -0.03
LINC01443-201ENST00000580967 KCNA4P22459 653 aa14.83□□□□□ -0.03
LINC01443-201ENST00000580967 DNAJC5BQ9UF47 199 aa14.81□□□□□ -0.04
LINC01443-201ENST00000580967 AMER1Q5JTC6 1135 aaPredicted RBP14.78□□□□□ -0.04
LINC01443-201ENST00000580967 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
LINC01443-201ENST00000580967 CECR2Q9BXF3 1484 aa14.67□□□□□ -0.06
LINC01443-201ENST00000580967 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
LINC01443-201ENST00000580967 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
LINC01443-201ENST00000580967 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
LINC01443-201ENST00000580967 BAZ1AQ9NRL2 1556 aaPredicted RBP14.53□□□□□ -0.08
LINC01443-201ENST00000580967 MROH2BQ7Z745 1585 aa14.5□□□□□ -0.09
LINC01443-201ENST00000580967 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
LINC01443-201ENST00000580967 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
LINC01443-201ENST00000580967 HRCP23327 699 aa14.4□□□□□ -0.1
LINC01443-201ENST00000580967 SMARCA2P51531 1590 aa14.4□□□□□ -0.1
LINC01443-201ENST00000580967 NCAPD3P42695 1498 aa14.38□□□□□ -0.11
LINC01443-201ENST00000580967 WIZO95785 1651 aa14.37□□□□□ -0.11
LINC01443-201ENST00000580967 SLC4A1APQ9BWU0 796 aaKnown RBP14.37□□□□□ -0.11
LINC01443-201ENST00000580967 RSF1Q96T23 1441 aaPredicted RBP14.37□□□□□ -0.11
LINC01443-201ENST00000580967 BAZ1BQ9UIG0 1483 aaKnown RBP14.34□□□□□ -0.11
LINC01443-201ENST00000580967 PEG3Q9GZU2 1588 aa14.33□□□□□ -0.11
LINC01443-201ENST00000580967 HMGXB3Q12766 1538 aa14.3□□□□□ -0.12
LINC01443-201ENST00000580967 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
LINC01443-201ENST00000580967 DAXXQ9UER7 740 aaPredicted RBP14.18□□□□□ -0.14
LINC01443-201ENST00000580967 TOP2AP11388 1531 aaKnown RBP14.17□□□□□ -0.14
LINC01443-201ENST00000580967 NESP48681 1621 aa14.08□□□□□ -0.15
LINC01443-201ENST00000580967 CCDC88BA6NC98 1476 aa14.05□□□□□ -0.16
LINC01443-201ENST00000580967 CADPSQ9ULU8 1353 aa14.01□□□□□ -0.17
LINC01443-201ENST00000580967 ADRA2BP18089 450 aa14.01□□□□□ -0.17
LINC01443-201ENST00000580967 LAMC3Q9Y6N6 1575 aa13.98□□□□□ -0.17
LINC01443-201ENST00000580967 ERCC6Q03468 1493 aa13.98□□□□□ -0.17
LINC01443-201ENST00000580967 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
LINC01443-201ENST00000580967 CFTRP13569 1480 aa13.93□□□□□ -0.18
LINC01443-201ENST00000580967 PDS5BQ9NTI5 1447 aa13.92□□□□□ -0.18
LINC01443-201ENST00000580967 APLP2Q06481 763 aa13.9□□□□□ -0.18
LINC01443-201ENST00000580967 KIF21AQ7Z4S6 1674 aa13.89□□□□□ -0.19
LINC01443-201ENST00000580967 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
LINC01443-201ENST00000580967 FANCD2Q9BXW9 1451 aa13.86□□□□□ -0.19
LINC01443-201ENST00000580967 SCAF1Q9H7N4 1312 aaKnown RBP13.83□□□□□ -0.2
LINC01443-201ENST00000580967 CEP164Q9UPV0 1460 aa13.82□□□□□ -0.2
LINC01443-201ENST00000580967 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
LINC01443-201ENST00000580967 THOC2Q8NI27 1593 aaKnown RBP13.76□□□□□ -0.21
LINC01443-201ENST00000580967 MRC2Q9UBG0 1479 aa13.76□□□□□ -0.21
LINC01443-201ENST00000580967 SENP3Q9H4L4 574 aaPredicted RBP13.76□□□□□ -0.21
LINC01443-201ENST00000580967 ZBTB22O15209 634 aa13.71□□□□□ -0.21
LINC01443-201ENST00000580967 URB2Q14146 1524 aaKnown RBP13.7□□□□□ -0.22
LINC01443-201ENST00000580967 CUX2O14529 1486 aa13.7□□□□□ -0.22
LINC01443-201ENST00000580967 ARXQ96QS3 562 aa13.69□□□□□ -0.22
LINC01443-201ENST00000580967 WDR62O43379 1518 aa13.69□□□□□ -0.22
LINC01443-201ENST00000580967 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
LINC01443-201ENST00000580967 BCANQ96GW7 911 aa13.68□□□□□ -0.22
LINC01443-201ENST00000580967 PPARGC1BQ86YN6 1023 aaKnown RBP13.66□□□□□ -0.22
LINC01443-201ENST00000580967 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
LINC01443-201ENST00000580967 ABCC8Q09428 1581 aa13.61□□□□□ -0.23
LINC01443-201ENST00000580967 DNMBPQ6XZF7 1577 aa13.61□□□□□ -0.23
LINC01443-201ENST00000580967 CUX1P39880 1505 aa13.58□□□□□ -0.23
LINC01443-201ENST00000580967 WRNQ14191 1432 aaPredicted RBP eCLIP13.56□□□□□ -0.24
LINC01443-201ENST00000580967 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
LINC01443-201ENST00000580967 FGD5Q6ZNL6 1462 aa13.54□□□□□ -0.24
LINC01443-201ENST00000580967 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
LINC01443-201ENST00000580967 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.24
LINC01443-201ENST00000580967 SOGA1O94964 1423 aa13.52□□□□□ -0.25
LINC01443-201ENST00000580967 SYNJ1O43426 1573 aa13.51□□□□□ -0.25
LINC01443-201ENST00000580967 IFT140Q96RY7 1462 aa13.5□□□□□ -0.25
LINC01443-201ENST00000580967 ZEB1P37275 1124 aaPredicted RBP13.5□□□□□ -0.25
LINC01443-201ENST00000580967 TIMELESSQ9UNS1 1208 aa13.5□□□□□ -0.25
LINC01443-201ENST00000580967 ZNF608Q9ULD9 1512 aaPredicted RBP13.48□□□□□ -0.25
LINC01443-201ENST00000580967 TOP2BQ02880 1626 aa13.48□□□□□ -0.25
LINC01443-201ENST00000580967 PCGF6Q9BYE7 350 aa13.48□□□□□ -0.25
LINC01443-201ENST00000580967 BIVM-ERCC5R4GMW8 1640 aa13.46□□□□□ -0.25
LINC01443-201ENST00000580967 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.25
LINC01443-201ENST00000580967 TDRD9Q8NDG6 1382 aaKnown RBP13.45□□□□□ -0.26
LINC01443-201ENST00000580967 AQRO60306 1485 aaKnown RBP eCLIP13.44□□□□□ -0.26
LINC01443-201ENST00000580967 ACIN1Q9UKV3 1341 aaKnown RBP13.43□□□□□ -0.26
LINC01443-201ENST00000580967 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
LINC01443-201ENST00000580967 TRIM41Q8WV44 630 aa13.41□□□□□ -0.26
LINC01443-201ENST00000580967 EIF4G3O43432 1585 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms