RNA–Protein interactions for RNA: ENST00000579476.5

SKAP1-203, Transcript of src kinase associated phosphoprotein 1, humanhuman

TSL 2

Gene SKAP1, Length 682 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKAP1-203ENST00000579476 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
SKAP1-203ENST00000579476 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
SKAP1-203ENST00000579476 SENP3Q9H4L4 574 aaPredicted RBP20.07■□□□□ 0.8
SKAP1-203ENST00000579476 PHF23Q9BUL5 403 aaPredicted RBP19.78■□□□□ 0.76
SKAP1-203ENST00000579476 FOXD1Q16676 465 aa18.7■□□□□ 0.58
SKAP1-203ENST00000579476 NISCHQ9Y2I1 1504 aa18.42■□□□□ 0.54
SKAP1-203ENST00000579476 PLPPR3Q6T4P5 718 aa17.64■□□□□ 0.41
SKAP1-203ENST00000579476 MSH5O43196 834 aa17.59■□□□□ 0.41
SKAP1-203ENST00000579476 PIAS4Q8N2W9 510 aaPredicted RBP17.48■□□□□ 0.39
SKAP1-203ENST00000579476 POTEDQ86YR6 584 aa17.42■□□□□ 0.38
SKAP1-203ENST00000579476 PPP6R1Q9UPN7 881 aa17.35■□□□□ 0.37
SKAP1-203ENST00000579476 ADRA2BP18089 450 aa17.33■□□□□ 0.36
SKAP1-203ENST00000579476 CCDC180Q9P1Z9 1646 aa16.36■□□□□ 0.21
SKAP1-203ENST00000579476 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
SKAP1-203ENST00000579476 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
SKAP1-203ENST00000579476 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
SKAP1-203ENST00000579476 ABCC9O60706 1549 aa15.75■□□□□ 0.11
SKAP1-203ENST00000579476 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
SKAP1-203ENST00000579476 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
SKAP1-203ENST00000579476 MYO15BQ96JP2 1530 aa15.36■□□□□ 0.05
SKAP1-203ENST00000579476 NACADO15069 1562 aa15.36■□□□□ 0.05
SKAP1-203ENST00000579476 DCAF8L1A6NGE4 600 aa15.34■□□□□ 0.05
SKAP1-203ENST00000579476 DCAF1Q9Y4B6 1507 aa15.33■□□□□ 0.04
SKAP1-203ENST00000579476 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
SKAP1-203ENST00000579476 DCAF8L2P0C7V8 631 aa15.24■□□□□ 0.03
SKAP1-203ENST00000579476 CACNB1Q02641 598 aaPredicted RBP15.23■□□□□ 0.03
SKAP1-203ENST00000579476 HOXD11P31277 338 aaPredicted RBP15.2■□□□□ 0.02
SKAP1-203ENST00000579476 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
SKAP1-203ENST00000579476 RNF216Q9NWF9 866 aaPredicted RBP15.07■□□□□ 0
SKAP1-203ENST00000579476 RNF39Q9H2S5 420 aa14.97□□□□□ -0.01
SKAP1-203ENST00000579476 SCRIBQ14160 1630 aa14.85□□□□□ -0.03
SKAP1-203ENST00000579476 NCBP3Q53F19 620 aaKnown RBP14.84□□□□□ -0.03
SKAP1-203ENST00000579476 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
SKAP1-203ENST00000579476 UNC13AQ9UPW8 1703 aa14.81□□□□□ -0.04
SKAP1-203ENST00000579476 C1QBPQ07021 282 aaKnown RBP14.76□□□□□ -0.05
SKAP1-203ENST00000579476 BICRAQ9NZM4 1560 aa14.76□□□□□ -0.05
SKAP1-203ENST00000579476 PABPN1Q86U42 306 aaKnown RBP eCLIP14.7□□□□□ -0.06
SKAP1-203ENST00000579476 DNAJC5BQ9UF47 199 aa14.68□□□□□ -0.06
SKAP1-203ENST00000579476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
SKAP1-203ENST00000579476 NPM3O75607 178 aaKnown RBP14.57□□□□□ -0.08
SKAP1-203ENST00000579476 EIF4G1Q04637 1599 aaKnown RBP14.4□□□□□ -0.1
SKAP1-203ENST00000579476 BAZ1AQ9NRL2 1556 aaPredicted RBP14.32□□□□□ -0.12
SKAP1-203ENST00000579476 CC2D2AQ9P2K1 1620 aa14.27□□□□□ -0.12
SKAP1-203ENST00000579476 SMARCA4P51532 1647 aa14.26□□□□□ -0.13
SKAP1-203ENST00000579476 CECR2Q9BXF3 1484 aa14.25□□□□□ -0.13
SKAP1-203ENST00000579476 SMARCA2P51531 1590 aa14.19□□□□□ -0.14
SKAP1-203ENST00000579476 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
SKAP1-203ENST00000579476 KCNA4P22459 653 aa14.17□□□□□ -0.14
SKAP1-203ENST00000579476 PEG3Q9GZU2 1588 aa14.16□□□□□ -0.14
SKAP1-203ENST00000579476 MROH2BQ7Z745 1585 aa14.15□□□□□ -0.14
SKAP1-203ENST00000579476 NCAPD3P42695 1498 aa14.14□□□□□ -0.15
SKAP1-203ENST00000579476 ATAD2BQ9ULI0 1458 aa14.14□□□□□ -0.15
SKAP1-203ENST00000579476 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
SKAP1-203ENST00000579476 CAPN15O75808 1086 aa14.09□□□□□ -0.15
SKAP1-203ENST00000579476 RSF1Q96T23 1441 aaPredicted RBP14.07□□□□□ -0.16
SKAP1-203ENST00000579476 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
SKAP1-203ENST00000579476 SPINK5Q9NQ38 1064 aaPredicted RBP14.05□□□□□ -0.16
SKAP1-203ENST00000579476 WIZO95785 1651 aa13.98□□□□□ -0.17
SKAP1-203ENST00000579476 DSG3P32926 999 aa13.97□□□□□ -0.17
SKAP1-203ENST00000579476 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
SKAP1-203ENST00000579476 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
SKAP1-203ENST00000579476 APLP2Q06481 763 aa13.84□□□□□ -0.19
SKAP1-203ENST00000579476 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
SKAP1-203ENST00000579476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
SKAP1-203ENST00000579476 HNRNPUL2Q1KMD3 747 aaKnown RBP13.78□□□□□ -0.2
SKAP1-203ENST00000579476 SUPT5HO00267 1087 aaKnown RBP13.77□□□□□ -0.21
SKAP1-203ENST00000579476 ZNF219Q9P2Y4 722 aaPredicted RBP13.76□□□□□ -0.21
SKAP1-203ENST00000579476 LAMC3Q9Y6N6 1575 aa13.75□□□□□ -0.21
SKAP1-203ENST00000579476 ABCB7O75027 752 aa13.73□□□□□ -0.21
SKAP1-203ENST00000579476 CADPSQ9ULU8 1353 aa13.72□□□□□ -0.21
SKAP1-203ENST00000579476 CCDC88BA6NC98 1476 aa13.71□□□□□ -0.21
SKAP1-203ENST00000579476 CFTRP13569 1480 aa13.68□□□□□ -0.22
SKAP1-203ENST00000579476 SAMD1Q6SPF0 538 aaPredicted RBP13.68□□□□□ -0.22
SKAP1-203ENST00000579476 PDS5BQ9NTI5 1447 aa13.67□□□□□ -0.22
SKAP1-203ENST00000579476 ERCC6Q03468 1493 aa13.65□□□□□ -0.22
SKAP1-203ENST00000579476 NESP48681 1621 aa13.64□□□□□ -0.23
SKAP1-203ENST00000579476 POTEHQ6S545 545 aa13.63□□□□□ -0.23
SKAP1-203ENST00000579476 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
SKAP1-203ENST00000579476 PRDM2Q13029 1718 aa13.56□□□□□ -0.24
SKAP1-203ENST00000579476 CEP164Q9UPV0 1460 aa13.55□□□□□ -0.24
SKAP1-203ENST00000579476 MRC2Q9UBG0 1479 aa13.5□□□□□ -0.25
SKAP1-203ENST00000579476 MYCNP04198 464 aaPredicted RBP13.5□□□□□ -0.25
SKAP1-203ENST00000579476 KIF21AQ7Z4S6 1674 aa13.5□□□□□ -0.25
SKAP1-203ENST00000579476 CUX2O14529 1486 aa13.48□□□□□ -0.25
SKAP1-203ENST00000579476 THOC2Q8NI27 1593 aaKnown RBP13.47□□□□□ -0.25
SKAP1-203ENST00000579476 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
SKAP1-203ENST00000579476 WDR62O43379 1518 aa13.45□□□□□ -0.26
SKAP1-203ENST00000579476 POLA2Q14181 598 aa13.38□□□□□ -0.27
SKAP1-203ENST00000579476 RBM42Q9BTD8 480 aaKnown RBP13.38□□□□□ -0.27
SKAP1-203ENST00000579476 URB2Q14146 1524 aaKnown RBP13.38□□□□□ -0.27
SKAP1-203ENST00000579476 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
SKAP1-203ENST00000579476 SLC4A1APQ9BWU0 796 aaKnown RBP13.37□□□□□ -0.27
SKAP1-203ENST00000579476 TOPBP1Q92547 1522 aa13.35□□□□□ -0.27
SKAP1-203ENST00000579476 WRNQ14191 1432 aaPredicted RBP eCLIP13.3□□□□□ -0.28
SKAP1-203ENST00000579476 CUX1P39880 1505 aa13.29□□□□□ -0.28
SKAP1-203ENST00000579476 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
SKAP1-203ENST00000579476 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
SKAP1-203ENST00000579476 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
SKAP1-203ENST00000579476 POLA1P09884 1462 aaPredicted RBP13.24□□□□□ -0.29
SKAP1-203ENST00000579476 BIVM-ERCC5R4GMW8 1640 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms