RNA–Protein interactions for RNA: ENST00000578517.5

PLXDC1-213, Transcript of plexin domain containing 1, humanhuman

TSL 1 (best)

Gene PLXDC1, Length 2,605 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXDC1-213ENST00000578517 NISCHQ9Y2I1 1504 aa30.12■■■□□ 2.41
PLXDC1-213ENST00000578517 SHROOM4Q9ULL8 1493 aa25.69■■□□□ 1.7
PLXDC1-213ENST00000578517 CCDC180Q9P1Z9 1646 aa25.56■■□□□ 1.68
PLXDC1-213ENST00000578517 ZCCHC6Q5VYS8 1495 aaKnown RBP25.47■■□□□ 1.67
PLXDC1-213ENST00000578517 CHIC1Q5VXU3 224 aa25.31■■□□□ 1.64
PLXDC1-213ENST00000578517 SUPT5HO00267 1087 aaKnown RBP25.25■■□□□ 1.63
PLXDC1-213ENST00000578517 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
PLXDC1-213ENST00000578517 DCAF1Q9Y4B6 1507 aa24.72■■□□□ 1.55
PLXDC1-213ENST00000578517 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
PLXDC1-213ENST00000578517 MYO15BQ96JP2 1530 aa24.42■■□□□ 1.5
PLXDC1-213ENST00000578517 ABCC9O60706 1549 aa24.01■■□□□ 1.43
PLXDC1-213ENST00000578517 SCRIBQ14160 1630 aa23.96■■□□□ 1.43
PLXDC1-213ENST00000578517 RSF1Q96T23 1441 aaPredicted RBP23.86■■□□□ 1.41
PLXDC1-213ENST00000578517 HRCP23327 699 aa23.86■■□□□ 1.41
PLXDC1-213ENST00000578517 LOC105371045A0A1W2PR82 267 aa23.85■■□□□ 1.41
PLXDC1-213ENST00000578517 PCGF6Q9BYE7 350 aa23.84■■□□□ 1.41
PLXDC1-213ENST00000578517 NACADO15069 1562 aa23.66■■□□□ 1.38
PLXDC1-213ENST00000578517 RB1CC1Q8TDY2 1594 aa23.58■■□□□ 1.37
PLXDC1-213ENST00000578517 TRIM41Q8WV44 630 aa23.53■■□□□ 1.36
PLXDC1-213ENST00000578517 CECR2Q9BXF3 1484 aa23.49■■□□□ 1.35
PLXDC1-213ENST00000578517 MROH2BQ7Z745 1585 aa23.41■■□□□ 1.34
PLXDC1-213ENST00000578517 TRIM26Q12899 539 aaPredicted RBP23.4■■□□□ 1.34
PLXDC1-213ENST00000578517 PPARGC1BQ86YN6 1023 aaKnown RBP23.33■■□□□ 1.33
PLXDC1-213ENST00000578517 FAM9AQ8IZU1 332 aaPredicted RBP23.32■■□□□ 1.32
PLXDC1-213ENST00000578517 WIZO95785 1651 aa23.28■■□□□ 1.32
PLXDC1-213ENST00000578517 BAZ1AQ9NRL2 1556 aaPredicted RBP23.13■■□□□ 1.29
PLXDC1-213ENST00000578517 EHMT2Q96KQ7 1210 aa23.1■■□□□ 1.29
PLXDC1-213ENST00000578517 EIF4G1Q04637 1599 aaKnown RBP22.95■■□□□ 1.26
PLXDC1-213ENST00000578517 PHF23Q9BUL5 403 aaPredicted RBP22.92■■□□□ 1.26
PLXDC1-213ENST00000578517 SMARCA4P51532 1647 aa22.91■■□□□ 1.26
PLXDC1-213ENST00000578517 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
PLXDC1-213ENST00000578517 ZEB1P37275 1124 aaPredicted RBP22.91■■□□□ 1.26
PLXDC1-213ENST00000578517 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
PLXDC1-213ENST00000578517 CCDC88BA6NC98 1476 aa22.84■■□□□ 1.25
PLXDC1-213ENST00000578517 SMARCA2P51531 1590 aa22.79■■□□□ 1.24
PLXDC1-213ENST00000578517 ABCC8Q09428 1581 aa22.77■■□□□ 1.24
PLXDC1-213ENST00000578517 PABPN1Q86U42 306 aaKnown RBP eCLIP22.68■■□□□ 1.22
PLXDC1-213ENST00000578517 BICRAQ9NZM4 1560 aa22.62■■□□□ 1.21
PLXDC1-213ENST00000578517 SOGA1O94964 1423 aa22.59■■□□□ 1.21
PLXDC1-213ENST00000578517 CSRNP3Q8WYN3 585 aa22.51■■□□□ 1.19
PLXDC1-213ENST00000578517 EEA1Q15075 1411 aa22.49■■□□□ 1.19
PLXDC1-213ENST00000578517 CEP162Q5TB80 1403 aa22.49■■□□□ 1.19
PLXDC1-213ENST00000578517 WRNQ14191 1432 aaPredicted RBP eCLIP22.49■■□□□ 1.19
PLXDC1-213ENST00000578517 TNIKQ9UKE5 1360 aa22.48■■□□□ 1.19
PLXDC1-213ENST00000578517 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
PLXDC1-213ENST00000578517 RUSC2Q8N2Y8 1516 aa22.46■■□□□ 1.19
PLXDC1-213ENST00000578517 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.44■■□□□ 1.18
PLXDC1-213ENST00000578517 UBTFP17480 764 aaKnown RBP22.42■■□□□ 1.18
PLXDC1-213ENST00000578517 CCER1Q8TC90 406 aaPredicted RBP22.39■■□□□ 1.18
PLXDC1-213ENST00000578517 TTBK1Q5TCY1 1321 aaPredicted RBP22.36■■□□□ 1.17
PLXDC1-213ENST00000578517 ATAD2BQ9ULI0 1458 aa22.34■■□□□ 1.17
PLXDC1-213ENST00000578517 GOLGA3Q08378 1498 aa22.32■■□□□ 1.16
PLXDC1-213ENST00000578517 BAZ1BQ9UIG0 1483 aaKnown RBP22.28■■□□□ 1.16
PLXDC1-213ENST00000578517 SYNJ1O43426 1573 aa22.27■■□□□ 1.16
PLXDC1-213ENST00000578517 CEP164Q9UPV0 1460 aa22.2■■□□□ 1.14
PLXDC1-213ENST00000578517 KIF21BO75037 1637 aa22.15■■□□□ 1.14
PLXDC1-213ENST00000578517 CLIP1P30622 1438 aa22.08■■□□□ 1.13
PLXDC1-213ENST00000578517 RAPGEF2Q9Y4G8 1499 aa22.03■■□□□ 1.12
PLXDC1-213ENST00000578517 TOP2BQ02880 1626 aa22.01■■□□□ 1.11
PLXDC1-213ENST00000578517 VPS8Q8N3P4 1428 aa21.99■■□□□ 1.11
PLXDC1-213ENST00000578517 SCAF1Q9H7N4 1312 aaKnown RBP21.97■■□□□ 1.11
PLXDC1-213ENST00000578517 DIEXFQ68CQ4 756 aaKnown RBP21.97■■□□□ 1.11
PLXDC1-213ENST00000578517 RANGAP1P46060 587 aaPredicted RBP21.93■■□□□ 1.1
PLXDC1-213ENST00000578517 APLP2Q06481 763 aa21.93■■□□□ 1.1
PLXDC1-213ENST00000578517 HNRNPUL2Q1KMD3 747 aaKnown RBP21.92■■□□□ 1.1
PLXDC1-213ENST00000578517 NCAPD3P42695 1498 aa21.92■■□□□ 1.1
PLXDC1-213ENST00000578517 BIVM-ERCC5R4GMW8 1640 aa21.91■■□□□ 1.1
PLXDC1-213ENST00000578517 HMGXB3Q12766 1538 aa21.88■■□□□ 1.09
PLXDC1-213ENST00000578517 PRXQ9BXM0 1461 aa21.82■■□□□ 1.08
PLXDC1-213ENST00000578517 ZNF316A6NFI3 1004 aaPredicted RBP21.81■■□□□ 1.08
PLXDC1-213ENST00000578517 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
PLXDC1-213ENST00000578517 ACIN1Q9UKV3 1341 aaKnown RBP21.79■■□□□ 1.08
PLXDC1-213ENST00000578517 CUX1P39880 1505 aa21.79■■□□□ 1.08
PLXDC1-213ENST00000578517 NEUROD1Q13562 356 aa21.76■■□□□ 1.07
PLXDC1-213ENST00000578517 CFTRP13569 1480 aa21.74■■□□□ 1.07
PLXDC1-213ENST00000578517 KIF27Q86VH2 1401 aa21.73■■□□□ 1.07
PLXDC1-213ENST00000578517 ARAP1Q96P48 1450 aa21.7■■□□□ 1.06
PLXDC1-213ENST00000578517 CENPBP07199 599 aaPredicted RBP21.68■■□□□ 1.06
PLXDC1-213ENST00000578517 KANK4Q5T7N3 995 aaPredicted RBP21.63■■□□□ 1.05
PLXDC1-213ENST00000578517 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
PLXDC1-213ENST00000578517 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
PLXDC1-213ENST00000578517 ARHGAP35Q9NRY4 1499 aa21.52■■□□□ 1.04
PLXDC1-213ENST00000578517 PRDM2Q13029 1718 aa21.51■■□□□ 1.03
PLXDC1-213ENST00000578517 CADPSQ9ULU8 1353 aa21.51■■□□□ 1.03
PLXDC1-213ENST00000578517 CLSPNQ9HAW4 1339 aa21.51■■□□□ 1.03
PLXDC1-213ENST00000578517 IGF1RP08069 1367 aa21.5■■□□□ 1.03
PLXDC1-213ENST00000578517 CUX2O14529 1486 aa21.5■■□□□ 1.03
PLXDC1-213ENST00000578517 SLC24A1O60721 1099 aa21.49■■□□□ 1.03
PLXDC1-213ENST00000578517 DHX57Q6P158 1386 aaKnown RBP21.49■■□□□ 1.03
PLXDC1-213ENST00000578517 MIER1Q8N108 512 aa21.49■■□□□ 1.03
PLXDC1-213ENST00000578517 RRBP1Q9P2E9 1410 aaKnown RBP21.48■■□□□ 1.03
PLXDC1-213ENST00000578517 YTHDC1Q96MU7 727 aaKnown RBP21.42■■□□□ 1.02
PLXDC1-213ENST00000578517 CARMIL1Q5VZK9 1371 aa21.41■■□□□ 1.02
PLXDC1-213ENST00000578517 CCNB3Q8WWL7 1395 aa21.41■■□□□ 1.02
PLXDC1-213ENST00000578517 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
PLXDC1-213ENST00000578517 ITGAEP38570 1179 aa21.33■■□□□ 1
PLXDC1-213ENST00000578517 CC2D2AQ9P2K1 1620 aa21.31■■□□□ 1
PLXDC1-213ENST00000578517 MAP3K1Q13233 1512 aa21.29■■□□□ 1
PLXDC1-213ENST00000578517 FANCD2Q9BXW9 1451 aa21.28■■□□□ 1
PLXDC1-213ENST00000578517 TIAM1Q13009 1591 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms