RNA–Protein interactions for RNA: ENST00000569012.5

TCF4-242, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-242ENST00000569012 AEBP2Q6ZN18 517 aaPredicted RBP17.21■□□□□ 0.35
TCF4-242ENST00000569012 CHIC1Q5VXU3 224 aa17.15■□□□□ 0.34
TCF4-242ENST00000569012 NISCHQ9Y2I1 1504 aa15.52■□□□□ 0.07
TCF4-242ENST00000569012 PHF23Q9BUL5 403 aaPredicted RBP15.09■□□□□ 0.01
TCF4-242ENST00000569012 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
TCF4-242ENST00000569012 PLPPR3Q6T4P5 718 aa14.09□□□□□ -0.15
TCF4-242ENST00000569012 ABCC9O60706 1549 aa14.02□□□□□ -0.16
TCF4-242ENST00000569012 CCDC180Q9P1Z9 1646 aa13.96□□□□□ -0.17
TCF4-242ENST00000569012 FOXD1Q16676 465 aa13.58□□□□□ -0.24
TCF4-242ENST00000569012 RB1CC1Q8TDY2 1594 aa13.33□□□□□ -0.28
TCF4-242ENST00000569012 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
TCF4-242ENST00000569012 ADRA2BP18089 450 aa13.25□□□□□ -0.29
TCF4-242ENST00000569012 NACADO15069 1562 aa13.24□□□□□ -0.29
TCF4-242ENST00000569012 PPP6R1Q9UPN7 881 aa13.21□□□□□ -0.29
TCF4-242ENST00000569012 DCAF8L2P0C7V8 631 aa13.08□□□□□ -0.32
TCF4-242ENST00000569012 MYO15BQ96JP2 1530 aa13.07□□□□□ -0.32
TCF4-242ENST00000569012 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
TCF4-242ENST00000569012 UNC13AQ9UPW8 1703 aa13□□□□□ -0.33
TCF4-242ENST00000569012 BICRAQ9NZM4 1560 aa12.97□□□□□ -0.33
TCF4-242ENST00000569012 DCAF1Q9Y4B6 1507 aa12.85□□□□□ -0.35
TCF4-242ENST00000569012 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
TCF4-242ENST00000569012 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
TCF4-242ENST00000569012 SHROOM4Q9ULL8 1493 aa12.8□□□□□ -0.36
TCF4-242ENST00000569012 MSH5O43196 834 aa12.79□□□□□ -0.36
TCF4-242ENST00000569012 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
TCF4-242ENST00000569012 POTEDQ86YR6 584 aa12.66□□□□□ -0.38
TCF4-242ENST00000569012 CECR2Q9BXF3 1484 aa12.65□□□□□ -0.38
TCF4-242ENST00000569012 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
TCF4-242ENST00000569012 EIF4G1Q04637 1599 aaKnown RBP12.63□□□□□ -0.39
TCF4-242ENST00000569012 KCNA4P22459 653 aa12.51□□□□□ -0.41
TCF4-242ENST00000569012 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
TCF4-242ENST00000569012 DNAJC5Q9H3Z4 198 aa12.31□□□□□ -0.44
TCF4-242ENST00000569012 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
TCF4-242ENST00000569012 NCAPD3P42695 1498 aa12.25□□□□□ -0.45
TCF4-242ENST00000569012 SCAF1Q9H7N4 1312 aaKnown RBP12.17□□□□□ -0.46
TCF4-242ENST00000569012 CUX2O14529 1486 aa12.16□□□□□ -0.46
TCF4-242ENST00000569012 ATAD2BQ9ULI0 1458 aa12.16□□□□□ -0.46
TCF4-242ENST00000569012 SMARCA2P51531 1590 aa12.12□□□□□ -0.47
TCF4-242ENST00000569012 HMGXB3Q12766 1538 aa12.11□□□□□ -0.47
TCF4-242ENST00000569012 SMARCA4P51532 1647 aa12.1□□□□□ -0.47
TCF4-242ENST00000569012 ERCC6Q03468 1493 aa12.09□□□□□ -0.47
TCF4-242ENST00000569012 CNKSR2Q8WXI2 1034 aa12.04□□□□□ -0.48
TCF4-242ENST00000569012 PEG3Q9GZU2 1588 aa12.04□□□□□ -0.48
TCF4-242ENST00000569012 BAZ1AQ9NRL2 1556 aaPredicted RBP12.04□□□□□ -0.48
TCF4-242ENST00000569012 NESP48681 1621 aa12.03□□□□□ -0.48
TCF4-242ENST00000569012 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
TCF4-242ENST00000569012 EHMT2Q96KQ7 1210 aa12.02□□□□□ -0.49
TCF4-242ENST00000569012 BAZ1BQ9UIG0 1483 aaKnown RBP12.01□□□□□ -0.49
TCF4-242ENST00000569012 SLC4A1APQ9BWU0 796 aaKnown RBP12□□□□□ -0.49
TCF4-242ENST00000569012 LAMC3Q9Y6N6 1575 aa11.95□□□□□ -0.5
TCF4-242ENST00000569012 MROH2BQ7Z745 1585 aa11.94□□□□□ -0.5
TCF4-242ENST00000569012 THOC2Q8NI27 1593 aaKnown RBP11.92□□□□□ -0.5
TCF4-242ENST00000569012 MAPK8IP2Q13387 824 aaPredicted RBP11.91□□□□□ -0.5
TCF4-242ENST00000569012 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
TCF4-242ENST00000569012 KIF21AQ7Z4S6 1674 aa11.85□□□□□ -0.51
TCF4-242ENST00000569012 CADPSQ9ULU8 1353 aa11.85□□□□□ -0.51
TCF4-242ENST00000569012 MRC2Q9UBG0 1479 aa11.77□□□□□ -0.52
TCF4-242ENST00000569012 WIZO95785 1651 aa11.77□□□□□ -0.53
TCF4-242ENST00000569012 WDR62O43379 1518 aa11.76□□□□□ -0.53
TCF4-242ENST00000569012 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
TCF4-242ENST00000569012 DMRT2Q9Y5R5 561 aa11.7□□□□□ -0.54
TCF4-242ENST00000569012 CFTRP13569 1480 aa11.7□□□□□ -0.54
TCF4-242ENST00000569012 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
TCF4-242ENST00000569012 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
TCF4-242ENST00000569012 FANCD2Q9BXW9 1451 aa11.69□□□□□ -0.54
TCF4-242ENST00000569012 RSF1Q96T23 1441 aaPredicted RBP11.68□□□□□ -0.54
TCF4-242ENST00000569012 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
TCF4-242ENST00000569012 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
TCF4-242ENST00000569012 TOP2AP11388 1531 aaKnown RBP11.63□□□□□ -0.55
TCF4-242ENST00000569012 OSCARQ8IYS5 282 aa11.61□□□□□ -0.55
TCF4-242ENST00000569012 URB2Q14146 1524 aaKnown RBP11.6□□□□□ -0.55
TCF4-242ENST00000569012 HOXD11P31277 338 aaPredicted RBP11.57□□□□□ -0.56
TCF4-242ENST00000569012 PRDM2Q13029 1718 aa11.52□□□□□ -0.57
TCF4-242ENST00000569012 CCDC88BA6NC98 1476 aa11.51□□□□□ -0.57
TCF4-242ENST00000569012 ZBTB22O15209 634 aa11.49□□□□□ -0.57
TCF4-242ENST00000569012 IFT140Q96RY7 1462 aa11.49□□□□□ -0.57
TCF4-242ENST00000569012 ZNF608Q9ULD9 1512 aaPredicted RBP11.46□□□□□ -0.57
TCF4-242ENST00000569012 ABCC8Q09428 1581 aa11.45□□□□□ -0.58
TCF4-242ENST00000569012 TOPBP1Q92547 1522 aa11.45□□□□□ -0.58
TCF4-242ENST00000569012 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
TCF4-242ENST00000569012 RIMBP3CA6NJZ7 1639 aa11.42□□□□□ -0.58
TCF4-242ENST00000569012 RIMBP3BA6NNM3 1639 aa11.42□□□□□ -0.58
TCF4-242ENST00000569012 RIMBP3Q9UFD9 1639 aa11.42□□□□□ -0.58
TCF4-242ENST00000569012 DNMBPQ6XZF7 1577 aa11.4□□□□□ -0.58
TCF4-242ENST00000569012 ARHGEF11O15085 1522 aa11.39□□□□□ -0.59
TCF4-242ENST00000569012 TARBP1Q13395 1621 aaKnown RBP11.38□□□□□ -0.59
TCF4-242ENST00000569012 EIF4G3O43432 1585 aaKnown RBP11.37□□□□□ -0.59
TCF4-242ENST00000569012 AQRO60306 1485 aaKnown RBP eCLIP11.36□□□□□ -0.59
TCF4-242ENST00000569012 POLA1P09884 1462 aaPredicted RBP11.33□□□□□ -0.6
TCF4-242ENST00000569012 CHD1O14646 1710 aa11.3□□□□□ -0.6
TCF4-242ENST00000569012 CYB5RLQ6IPT4 315 aa11.3□□□□□ -0.6
TCF4-242ENST00000569012 SOGA1O94964 1423 aa11.29□□□□□ -0.6
TCF4-242ENST00000569012 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
TCF4-242ENST00000569012 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
TCF4-242ENST00000569012 ARAP1Q96P48 1450 aa11.26□□□□□ -0.61
TCF4-242ENST00000569012 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
TCF4-242ENST00000569012 FBLN2P98095 1184 aa11.26□□□□□ -0.61
TCF4-242ENST00000569012 WDR97A6NE52 1622 aa11.26□□□□□ -0.61
TCF4-242ENST00000569012 FGD5Q6ZNL6 1462 aa11.24□□□□□ -0.61
TCF4-242ENST00000569012 DCAF8L1A6NGE4 600 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms