RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 AEBP2Q6ZN18 517 aaPredicted RBP25.81■■□□□ 1.72
CNOT1-214ENST00000568917 CHIC1Q5VXU3 224 aa24.94■■□□□ 1.58
CNOT1-214ENST00000568917 PHF23Q9BUL5 403 aaPredicted RBP21.98■■□□□ 1.11
CNOT1-214ENST00000568917 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
CNOT1-214ENST00000568917 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
CNOT1-214ENST00000568917 FOXD1Q16676 465 aa20.34■□□□□ 0.85
CNOT1-214ENST00000568917 PLPPR3Q6T4P5 718 aa20.1■□□□□ 0.81
CNOT1-214ENST00000568917 PPP6R1Q9UPN7 881 aa19.47■□□□□ 0.71
CNOT1-214ENST00000568917 ADRA2BP18089 450 aa19.39■□□□□ 0.69
CNOT1-214ENST00000568917 PIAS4Q8N2W9 510 aaPredicted RBP19.07■□□□□ 0.64
CNOT1-214ENST00000568917 MSH5O43196 834 aa18.76■□□□□ 0.59
CNOT1-214ENST00000568917 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
CNOT1-214ENST00000568917 ZCCHC6Q5VYS8 1495 aaKnown RBP17.87■□□□□ 0.45
CNOT1-214ENST00000568917 PPP4R3CPQ6ZMV5 832 aa17.72■□□□□ 0.43
CNOT1-214ENST00000568917 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
CNOT1-214ENST00000568917 MAPK8IP2Q13387 824 aaPredicted RBP17.69■□□□□ 0.42
CNOT1-214ENST00000568917 SCAF1Q9H7N4 1312 aaKnown RBP17.62■□□□□ 0.41
CNOT1-214ENST00000568917 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
CNOT1-214ENST00000568917 MYO15BQ96JP2 1530 aa17.51■□□□□ 0.39
CNOT1-214ENST00000568917 DMRT2Q9Y5R5 561 aa17.43■□□□□ 0.38
CNOT1-214ENST00000568917 ABCC9O60706 1549 aa17.35■□□□□ 0.37
CNOT1-214ENST00000568917 NACADO15069 1562 aa17.31■□□□□ 0.36
CNOT1-214ENST00000568917 DCAF8L2P0C7V8 631 aa17.3■□□□□ 0.36
CNOT1-214ENST00000568917 CNKSR2Q8WXI2 1034 aa17.24■□□□□ 0.35
CNOT1-214ENST00000568917 RB1CC1Q8TDY2 1594 aa17.12■□□□□ 0.33
CNOT1-214ENST00000568917 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
CNOT1-214ENST00000568917 KCNA4P22459 653 aa17.11■□□□□ 0.33
CNOT1-214ENST00000568917 SHROOM4Q9ULL8 1493 aa17.09■□□□□ 0.33
CNOT1-214ENST00000568917 HOXD11P31277 338 aaPredicted RBP16.99■□□□□ 0.31
CNOT1-214ENST00000568917 NPM3O75607 178 aaKnown RBP16.97■□□□□ 0.31
CNOT1-214ENST00000568917 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
CNOT1-214ENST00000568917 SCRIBQ14160 1630 aa16.93■□□□□ 0.3
CNOT1-214ENST00000568917 UNC13AQ9UPW8 1703 aa16.73■□□□□ 0.27
CNOT1-214ENST00000568917 DCAF8L1A6NGE4 600 aa16.6■□□□□ 0.25
CNOT1-214ENST00000568917 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
CNOT1-214ENST00000568917 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
CNOT1-214ENST00000568917 SUPT5HO00267 1087 aaKnown RBP16.48■□□□□ 0.23
CNOT1-214ENST00000568917 BAZ1AQ9NRL2 1556 aaPredicted RBP16.44■□□□□ 0.22
CNOT1-214ENST00000568917 RSF1Q96T23 1441 aaPredicted RBP16.44■□□□□ 0.22
CNOT1-214ENST00000568917 CECR2Q9BXF3 1484 aa16.39■□□□□ 0.22
CNOT1-214ENST00000568917 MROH2BQ7Z745 1585 aa16.34■□□□□ 0.21
CNOT1-214ENST00000568917 SMARCA4P51532 1647 aa16.32■□□□□ 0.2
CNOT1-214ENST00000568917 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
CNOT1-214ENST00000568917 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.19
CNOT1-214ENST00000568917 WIZO95785 1651 aa16.2■□□□□ 0.18
CNOT1-214ENST00000568917 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
CNOT1-214ENST00000568917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.13■□□□□ 0.175e-7■□□□□ 10.9
CNOT1-214ENST00000568917 RNF39Q9H2S5 420 aa16.13■□□□□ 0.17
CNOT1-214ENST00000568917 TOP2AP11388 1531 aaKnown RBP16.12■□□□□ 0.17
CNOT1-214ENST00000568917 SLC4A2P04920 1241 aa16.12■□□□□ 0.17
CNOT1-214ENST00000568917 SMARCA2P51531 1590 aa16.09■□□□□ 0.17
CNOT1-214ENST00000568917 EIF4G1Q04637 1599 aaKnown RBP16.05■□□□□ 0.16
CNOT1-214ENST00000568917 ATAD2BQ9ULI0 1458 aa16.03■□□□□ 0.16
CNOT1-214ENST00000568917 HMGXB3Q12766 1538 aa15.95■□□□□ 0.14
CNOT1-214ENST00000568917 NCAPD3P42695 1498 aa15.94■□□□□ 0.14
CNOT1-214ENST00000568917 BAZ1BQ9UIG0 1483 aaKnown RBP15.94■□□□□ 0.14
CNOT1-214ENST00000568917 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
CNOT1-214ENST00000568917 CCDC88BA6NC98 1476 aa15.89■□□□□ 0.13
CNOT1-214ENST00000568917 C1QBPQ07021 282 aaKnown RBP15.87■□□□□ 0.13
CNOT1-214ENST00000568917 ZBTB22O15209 634 aa15.8■□□□□ 0.12
CNOT1-214ENST00000568917 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
CNOT1-214ENST00000568917 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
CNOT1-214ENST00000568917 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
CNOT1-214ENST00000568917 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
CNOT1-214ENST00000568917 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
CNOT1-214ENST00000568917 PRDM2Q13029 1718 aa15.58■□□□□ 0.08
CNOT1-214ENST00000568917 CFTRP13569 1480 aa15.57■□□□□ 0.08
CNOT1-214ENST00000568917 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
CNOT1-214ENST00000568917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
CNOT1-214ENST00000568917 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.08
CNOT1-214ENST00000568917 EHMT2Q96KQ7 1210 aa15.5■□□□□ 0.07
CNOT1-214ENST00000568917 ABCC8Q09428 1581 aa15.5■□□□□ 0.07
CNOT1-214ENST00000568917 SAMD1Q6SPF0 538 aaPredicted RBP15.49■□□□□ 0.07
CNOT1-214ENST00000568917 CADPSQ9ULU8 1353 aa15.49■□□□□ 0.07
CNOT1-214ENST00000568917 WRNQ14191 1432 aaPredicted RBP eCLIP15.49■□□□□ 0.07
CNOT1-214ENST00000568917 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
CNOT1-214ENST00000568917 LAMC3Q9Y6N6 1575 aa15.42■□□□□ 0.06
CNOT1-214ENST00000568917 BIVM-ERCC5R4GMW8 1640 aa15.41■□□□□ 0.06
CNOT1-214ENST00000568917 CAPN15O75808 1086 aa15.41■□□□□ 0.06
CNOT1-214ENST00000568917 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
CNOT1-214ENST00000568917 SYNJ1O43426 1573 aa15.39■□□□□ 0.05
CNOT1-214ENST00000568917 EEA1Q15075 1411 aa15.39■□□□□ 0.05
CNOT1-214ENST00000568917 APLP2Q06481 763 aa15.38■□□□□ 0.05
CNOT1-214ENST00000568917 ATF5Q9Y2D1 282 aaPredicted RBP15.33■□□□□ 0.04
CNOT1-214ENST00000568917 TRHP20396 242 aaPredicted RBP15.3■□□□□ 0.04
CNOT1-214ENST00000568917 FANCD2Q9BXW9 1451 aa15.3■□□□□ 0.04
CNOT1-214ENST00000568917 CUX1P39880 1505 aa15.29■□□□□ 0.04
CNOT1-214ENST00000568917 DSG3P32926 999 aa15.27■□□□□ 0.04
CNOT1-214ENST00000568917 ZNF219Q9P2Y4 722 aaPredicted RBP15.26■□□□□ 0.03
CNOT1-214ENST00000568917 PDS5BQ9NTI5 1447 aa15.26■□□□□ 0.03
CNOT1-214ENST00000568917 NESP48681 1621 aa15.23■□□□□ 0.03
CNOT1-214ENST00000568917 ATXN8OSP0DMR3 200 aa15.22■□□□□ 0.03
CNOT1-214ENST00000568917 SOGA1O94964 1423 aa15.22■□□□□ 0.03
CNOT1-214ENST00000568917 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
CNOT1-214ENST00000568917 DNMBPQ6XZF7 1577 aa15.21■□□□□ 0.03
CNOT1-214ENST00000568917 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
CNOT1-214ENST00000568917 FAM9AQ8IZU1 332 aaPredicted RBP15.17■□□□□ 0.02
CNOT1-214ENST00000568917 TOPBP1Q92547 1522 aa15.15■□□□□ 0.02
CNOT1-214ENST00000568917 KIF21BO75037 1637 aa15.14■□□□□ 0.01
CNOT1-214ENST00000568917 ABCB7O75027 752 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms